Leclercia sp. Colony189: GNG29_20610
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Entry
GNG29_20610 CDS
T06321
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ler03019
]
GNG29_20610 (csrD)
Messenger RNA biogenesis [BR:
ler03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GNG29_20610 (csrD)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
QGW18815
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All DBs
Position
complement(4328991..4330931)
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AA seq
646 aa
AA seq
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MRLSTKFSAFISLLTGLTIFVTFIGCSLSFYNAIQGKLANRVHSVASVIDSRLVSTPFPE
LSRQLDELMAPVDIMRVEIKQGGNLLLSHTGHTHYRQVGSPPQMLQLTVPSLKNPGMTIS
LVYLDPMTSYFRSLMTTAPLTVAVIFIVVLIFLAVRWLRRQLAGQELLESRSTRILNGER
GAQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRIDTLIRSYAAQDNKTGLNNRLFFDN
QLGTLLEDQENVGTHGVVMIIRLPDFDLLKDNWGRAVAEEQQFTLINMLSTFIMRYPGAL
LARYHRSDYAVLLPHRTLKESESIAGLLLKSVDALPPSKMLDRDDMVHIGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLTRGGPRIYQKPAV
LTSGKVHHRELLCRIFDGNEEVVSAEYLPMILQFGLSEEYDRQQISRLMPFLSYWPEENL
ALQVTVESLIRPRFQRWLRDLLMQCEKSQRKRIIFELAEADVCQHISRLQPVVRLINALG
ARVAVTQAGLTLVSTSWIKALEVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTRV
FATGVRSRTEWQTLTERGVTGGQGDFFAASQPLDSNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattatcgacgaagttctccgcttttatctccttgcttaccgggttgaccatattc
gtcacctttatcggctgttcgctcagtttttataatgcgatccagggaaagctggcgaac
cgcgtccactccgtggcgtcagtgattgattcccgccttgtcagcacaccctttccagaa
ctttcccgtcaactggatgagctgatggccccggtggatatcatgcgggtggagattaag
cagggcggcaacctccttttaagccacaccgggcatacgcattaccggcaggtgggttca
cctccgcagatgctccagctcaccgtcccctccctgaaaaaccccggtatgacgataagc
ctggtctatctggacccaatgaccagttattttcgttcattgatgactaccgcaccgctc
acggtggcggtgattttcatcgtggtgctgatcttcctggcggtgcgctggctgcggcgt
cagctcgccggacaggagctactggagtcgcgttctacgcggatccttaacggtgaacgc
ggcgcgcaggtgcgcggctcggtctatgagtggccctcacgcaccagcagcgcgttggac
gttttgctgtccgaaattcagttcgccagcgaccagcgcagccggatagataccctgatc
cgatcctatgccgcccaggacaataaaaccggcctcaataaccgcctgttctttgataat
cagctgggcactttgctggaagatcaggagaacgtgggcacacatggggtggtgatgatt
atccgtctgccggacttcgatctgctgaaagataactgggggcgggcagtggcggaggag
cagcagtttacgctcattaatatgctctccacctttatcatgcgttaccccggcgcactg
ctggcacgctatcaccgcagtgattacgccgtattgttgccgcaccgcacgctgaaggag
tctgaaagcattgccgggctgctgttgaaatcggtggatgcgctcccacccagcaaaatg
ctcgatcgtgatgacatggtgcatatcggcatctgcgcctggcgcggcggccagtctacc
gagcaggtgatggaacatgccgaggctgccacccgtaatgcggtgttgcaaggggcgaac
ggctgggcggtttatgatgactccctgcccgaaaaaggacgcggcaacgtgcgctggcga
accttaatcgagcagatgctgacccgaggcggaccgcggatttaccaaaaaccggcggtg
ctgaccagcggcaaggtccatcatcgggaactgctctgtcgaatcttcgacggcaacgaa
gaggtggtatcggccgagtatctgccgatgatcctgcagtttggcctgtctgaagagtac
gaccgccagcagatatcgcgcttgatgccatttttatcctactggcccgaagagaacctg
gcgctgcaggtgacggtggagtcgttgatccgcccgcgtttccagcgctggctgcgggat
ctgctgatgcaatgtgaaaaatcgcagcggaaacggattatttttgaacttgcagaggcg
gatgtttgtcaacacatcagtcggttacagccggttgttcggctgattaacgcgttgggc
gcgcgcgtcgcggtgacgcaggcgggtttaacgctggtcagcaccagctggatcaaggcg
ctggaggttgagctcctgaagctgcatccggggctggtaagaaatattgaaaagcgcacg
gaaaaccagctgctggtacagagcctggtggaagcgtgcaaaggaacgcaaacgcgtgta
tttgctacgggtgtgcggtcgcgaacggaatggcagacattgacagagcgcggcgtgaca
gggggtcagggcgatttttttgcggcctctcagcctcttgacagcaatgtgaaaaaatat
tcgcaaagatactctgtttaa
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