Leclercia sp. Colony189: GNG29_22045
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Entry
GNG29_22045 CDS
T06321
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler03420
Nucleotide excision repair
ler03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GNG29_22045 (uvrD)
03430 Mismatch repair
GNG29_22045 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ler03400
]
GNG29_22045 (uvrD)
Enzymes [BR:
ler01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNG29_22045 (uvrD)
DNA repair and recombination proteins [BR:
ler03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GNG29_22045 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GNG29_22045 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
PhoH
DEAD
DMP19
Motif
Other DBs
NCBI-ProteinID:
QGW19079
LinkDB
All DBs
Position
complement(4608583..4610745)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGSMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDS
SKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTEGIDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQERALAGRAASALQRFLELIEALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEECVEEVRLRASISRPVSHQRLG
TPVSESDSGFKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLEIV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgacaaacagcgtgacgcggttgccgcg
acgcgcaccaacatgctggtactggctggggcgggcagtggtaagacacgcgtgctggtg
caccgtattgcctggctgcagagcgtggagaactgttcgccatactccattatggcggtg
accttcaccaacaaagcggcggcggagatgcgccaccgtatcgcccagctgatgggcacc
agccagggcagcatgtgggtgggtaccttccacgggctggcgcaccgcctgctgcgtgcg
caccacctggacgctaacctgccgcaggactttcagatcctcgacagcgaagaccaactg
cgtctcctgaagcgcctgatcaaggcgatgaacctcgacgagaagcagtggccgccgcgt
caggcaatgtggtacatcaacagccagaaagacgaagggctgcgtccgcaccatatccag
agctttggtaatccgatagagcagacctggcagaaggtctaccaggcctaccaggaagcc
tgcgatcgcgcaggactggtggattttgccgagctgctgttgcgcgctcatgaactgtgg
ctcaacaaaccgcatattctgcagcactatcgcgaacgctttaccaacatcctggtcgat
gaattccaggataccaacaacattcagtatgcctggatccgcctgctggcgggcgactcc
agcaaagtgatgatcgtcggcgacgacgaccagtcgatctacggctggcgcggcgcgcag
gttgagaacatccagcgcttcctgaaggatttcccgggcgcagagaccattcgcctggaa
cagaactaccgctccaccaacaacattctgagcgccgccaacgccctgattgaaaataac
aacgggcgcctgggcaaaaagctctggaccgagggcatcgacggcgagccgatctccctc
tactgcgcctttaacgagctggatgaagcccgctttgtggtcaaccggatcaaaacctgg
caggacaacggcggggcgctggagcaatgcgccatcctctatcgcagtaacgcccagtcg
cgtgtgctggaagaggcgctgctacaggccagcatgccctaccgcatctacggcggcatg
cgcttcttcgaacgtcaggagatcaaagacgcgctctcctatctgcgtctgatcgccaat
cgcaacgacgacgcagccttcgagcgcgtggtcaacacgccaacccgcggcatcggcgat
cgcaccctggatgtggtgcgtcagacctcccgggatcgccagctgacgctgtggcaggcg
tgtcgcgagctgctgcaggagcgggcgcttgccggacgcgcagccagcgcgctgcagcgc
ttcctggagcttatcgaagctctggcccaggaaaccgccgacatgccgttgcacgttcag
accgaccgggtgatcaaagactccggcctgcgcatgatgtatgagcaggagaaaggcgag
aagggccagacccgtatcgagaacttagaggagctggtgaccgccacgcgtcagttcagc
tacaacgaagaagatgaagacctgatgccgctacaggcgttcctgtcccatgccgcgctg
gaggcgggcgaagggcaggccgacacctggcaggacgcggtgcagctgatgaccctccac
tcggccaaaggtctggagttcccgcaggtatttatcgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgagggcggacgtctggaggaggagcgtcgtctggcctat
gtgggcgtgacccgcgcgatgcaaaagctgaccctgacctatgccgaaacccgccgtctg
tacggcaaagaggtctatcaccgcccgtcacgctttgtcggcgagctgccggaggagtgt
gtggaagaggtacgcctgcgcgcaagcatcagccgcccggtgagccatcagcgtctgggg
acgccggtctcggaaagcgacagcggctttaagctgggccagcgcgttcgccatgccaaa
tttggcgaaggcaccatcgtcaatctggaaggcagtggcgagcacagccgtctgcaggtg
gcgttccaggggcagggcatcaaatggcttgtggccgcttacgccaggctggaaatcgtg
taa
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