Leucoraja erinaceus (little skate): 129693359
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Entry
129693359 CDS
T09122
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri02010
ABC transporters
leri04145
Phagosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129693359
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129693359
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129693359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129693359
Enzymes [BR:
leri01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
129693359
Transporters [BR:
leri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129693359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_16
AAA_30
AAA_25
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-GeneID:
129693359
NCBI-ProteinID:
XP_055486176
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAAAGGVIVSRSLALALVPAAAHLVLGPLLPAAWAPAGLAALLLAALALSRVRAPLLRYT
VCACLLPPLYAALRRALSLSPGPGLSWPLLLLAHAASALALTALERLPRAAPATASRSPA
AAAQLPLQRTITRRLLALSRPDLLPLAGAFIFLALAVIGGMFVPYYTGKVIDILGSQYDQ
RIFLFAIFCMCATSMGSSIAAGVRGGLFMFTMSRLSRRIRSQLFSSLVQQEIAFFDATKA
GDITSRLSTDTTLMSRSVGLNVNVLLRSLVNTLGIISFMFSLSWKLTLLIFIESPLTILI
QKLYNRYHMSLVLQVQDSIASSNQLAGEIVSSIKTVRSFAAEDLESELFEKKLQETHQLK
NKRDLVRAVYLLCHRLAMLLMQVVMLYCGQLLVNDGQMTSGNLIAFILYQMDFGIYVRLG
LEPSVDGTILAPVAGGRTLCIGANQLLHQGGSQLLRARRLDPGSTSFSTRGCKLLDVEIR
RPRLEHQTQTLIRMYSEMTHSVGAAEKVFEYLDREPSVRTDGTLVPESLQGHLEFKDVTF
SYPTKPDVPVLQDVSFEVRAGEVTALVGPSGGGKTTCVSLLQRFYKPQSGHILLDGRHIK
EYEHKYYHSKVALVGQEPTLFALSVQDNIRYGLDHCPQADVAAAAQSASARDFIERMDQG
FDTDVGEDGGQISAGQKQRIAIARALVRKPRILILDEATSSLDTHTELSIQRALAREPVA
AVLVIAHRLKTVQRADRIVVLEGGRVVERGTHTQLMELGGCYSRLVLRQFTNGEQGAAGG
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccggtggagtgatcgtgtcccggtccctagcgctggcccttgtccccgcc
gccgcccacctggtgctggggccgctgttgccagcagcctgggctccggccggcctggcc
gcgctgttactcgccgccctggcgctgtcccgggtccgggccccgctgctccgctacacg
gtctgtgcctgcctactgccgccgctctacgccgcccttcgccgggcgctgagtctcagc
ccaggccccggcctctcctggccgctcctcctgctcgcacacgccgcctcggccttggcc
ttgaccgccctggagcggctgccccgggccgccccggcaactgcctcccgatccccggcc
gctgccgcccagctccccctacagcggaccatcacccgccgcctactcgccctgtcccgg
cccgacctgctcccgctcgccggcgccttcatcttcctcgcactggccgtgatcgggggg
atgtttgtcccctattacacggggaaggtgatcgacatcctgggctcccagtatgaccag
cgcatcttcctctttgccatcttctgcatgtgtgccacgtccatgggaagttccattgca
gccggcgtgcgcggaggcctcttcatgttcacaatgtccaggctcagcagacgcatccgt
agtcaactcttctcctccctggtgcagcaggagatcgcattctttgacgccaccaaggct
ggggacatcaccagccgcctctccacggacaccacactcatgagccgctcggttggactc
aatgttaacgtcttgctgcgcagtctggtgaacacgctgggaatcatttccttcatgttc
agcctctcctggaagcttacccttctgatcttcatcgaatctcccctcaccatcctgatt
cagaagttgtataaccggtatcatatgagtctggtgctgcaggttcaggattcgatcgcc
agttcgaaccagctggccggtgagatcgtttcctccataaaaacggtcaggagcttcgcg
gccgaggacctggagtcagagctgtttgagaagaagctgcaggaaacgcaccagctgaag
aacaaacgtgacctggtcagagccgtctacctcctgtgtcacaggctggccatgctcctg
atgcaagtggtcatgctgtactgtgggcagctgctggtgaacgatgggcagatgaccagt
ggaaacctcatcgccttcatcctctaccagatggactttgggatctatgtgcggttgggc
cttgagccttccgttgacgggacgatcttggctccagtagctggcggtcggaccctctgc
atcggggcgaaccaactcctgcatcaggggggatctcagctactccgcgccaggcgattg
gaccctgggtcgacatcattctccacccgaggctgcaagctcctcgatgttgaaatccgc
aggcctcggctggagcatcaaacccagactctgatccgcatgtattcggaaatgacccat
tctgtgggagcagcggagaaagtatttgaatacctcgaccgtgagcccagtgttcgcact
gacgggacattggtgccagaatctctgcagggtcacctggagttcaaggacgtgactttc
tcttacccaacgaagcccgacgtcccagttttacaggacgtgtcgttcgaggtgcgggcc
ggggaggtgacggccctggtgggaccctcgggaggggggaagaccacctgcgtcagcctc
ctgcaacgtttctacaagcctcagtccggccacatcctgctggacgggcggcacatcaag
gagtacgagcacaagtactaccacagcaaggtggcgctcgtggggcaggagccgacactc
tttgccctatcggtgcaggacaacatccgctacgggctggatcactgcccgcaggcagac
gtggcagctgctgcccagagtgccagcgcacgggacttcatcgagaggatggaccagggc
ttcgacacagatgtgggcgaggatggcgggcagatctcagcgggacagaagcagcggatc
gccatcgcccgcgccctggtccggaagccgcggattctgatcctggacgaggccaccagc
tccttggacacacacaccgagttatcgatccagcgggccctggcccgtgagccggtggcc
gcagttctggtgatcgcccatcggctgaagactgtgcagcgggcggacaggatcgtggtg
ttggagggcggccgtgtggtggaacgaggcactcacactcagctgatggagctcggcggc
tgctactcccgcctggtgctgcggcagttcaccaacggagagcagggagcggccggggga
gagtag
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integrated database retrieval system
