Leucoraja erinaceus (little skate): 129693766
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Entry
129693766 CDS
T09122
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129693766 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129693766 (taf6)
03036 Chromosome and associated proteins [BR:
leri03036
]
129693766 (taf6)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129693766 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
129693766 (taf6)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129693766 (taf6)
STAGA complex
129693766 (taf6)
TFTC complex
129693766 (taf6)
SAGA complex
129693766 (taf6)
SLIK complex
129693766 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
CENP-S
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
129693766
NCBI-ProteinID:
XP_055486510
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAERKIKISNTLLPTESMKVISESMGIAQLPEETCQSMTEEVSYRIKELAQDAMKYMHHG
KRKKLTTVDIDSALKLKNVEPLYGFHAQEFIPFRYASGGGRELHFYEEKEVDLSDIINTP
LPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKEQPKVESTEPLKIIKPGQEEEGQAKGK
GQGNAAIDGKGKDKKKSVLEGGLLKLKPRTTHELSVEQQLYYKEITEACVGSCEAKRAEA
LQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVH
ELIPSVVTCIVSRQLCLRPDVDNHWALRDFAARLMAQICKNFSTTTNNIQSRITKTFTKS
WLDDKTAWTTRYGCIAGLAELGHDVNLIIQRLQVEGERIRAVLDGPLVSNIDRIGADHVQ
SLLLKHCAPVVAKVRPTPDNQDSYKTDYGSLGPMLCTHVVKARAQAAMQAQQVNRTTLTI
TQPRPTLTISQAPLTTQTTRSPSIIKVPSSLTLPMQTLVSARPSTPTQPSPQPTKYIMMS
SNSSSASSQQQRSMLSIPAGGQSPQPGGSPSIFKVPSSITLPMQTLLSRPSTPTPSSPSP
TNYIVMSSTAGSSSQQVRANTPGGWGRVVLDCDGVVLNWKPQVCAVCLDAFLSRTGAVVN
EGRRMWS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaagatcaagatcagcaacacgctgctgcccaccgagtcgatgaaggtc
atctccgagtccatgggcatcgcccagctccccgaggagacgtgccagagcatgacagag
gaggtcagctacaggatcaaggagttggcacaggatgccatgaagtacatgcaccacggc
aagaggaaaaaactgaccaccgtcgatatcgacagcgccctgaagctgaaaaatgtcgag
ccgctgtacgggttccacgcccaggagttcatccccttccgctatgccagtggtggcggc
cgggagctccacttctacgaggagaaggaggtggatctgagcgacatcatcaacaccccc
ctacctcgagtacccctcgacgtttgcctcaaagcccactggttgagcattgagggcgtg
cagccggccatcccggagaatccaccacccgctcctaaggagcagccgaaggttgagtcg
acggagccgctgaagatcatcaagccggggcaggaggaggaaggtcaagccaagggcaaa
ggtcaaggcaacgcggcaatcgatggcaaaggcaaagacaagaagaagtctgtgctggag
gggggcttgctgaagctgaagcctcggaccacgcacgagctctcggtggagcagcaactc
tactacaaggagataaccgaggcctgtgtgggctcctgtgaggccaagcgtgccgaggcg
ctgcagagcatcgccaccgaccctggtctctaccagatgctgccccggttcagcaccttc
atctcagagggggtgcgggtgaacgtggtccagaataacctggctctgctcatctacctg
atgcggatggtgaaggccctgatggacaatcccaccctgtacctggagaaatacgtgcac
gagttgatcccgtccgtggtgacctgcatcgtgagccgccagctgtgcctgcgcccagac
gtggacaaccactgggccctgcgggactttgccgcgcgcctgatggcccagatctgcaag
aacttcagcaccaccaccaacaacatccagtcgcgcatcaccaagaccttcaccaagagc
tggttggatgacaagaccgcgtggaccactcgttacggctgtatcgctggcctggctgaa
ctggggcacgacgtgaacctgatcatccagcggctacaggtggagggcgagcgtatccgg
gccgttctggacgggccgctcgtcagcaacatcgaccgcatcggagctgaccacgtacag
agcctgctgctgaaacactgcgctccggtggtggccaaggttcgcccgacaccggacaac
caggactcgtacaagacggactacggctcgctgggccccatgctgtgcacgcacgtggtg
aaggcccgggcccaggccgccatgcaggcccagcaggtcaaccgcaccacgctcaccatc
acgcagccaaggcccacactcaccatctcgcaggcaccactcaccacccagaccacccgc
tctcccagcatcatcaaggtgcccagctcactcaccctgcccatgcagaccctggtgtca
gcccggcctagcacccccacacagccctcgccacagcccaccaagtacatcatgatgtcc
tccaactccagctcggccagctcgcaacagcagcgctccatgctgtcgatacccgcgggt
ggacagagcccacagccgggcgggagtcccagcatcttcaaggtgcccagctccatcacg
ctgcccatgcagaccctgctgagtcgcccgtccacgcccaccccctcctcaccctcgccc
accaactacatcgtcatgtccagcaccgctggctccagctcacagcaggtcagagccaac
acgcccggggggtggggcagggtggttctagactgcgacggagttgtgttgaactggaag
ccacaagtctgtgccgtgtgtctagatgccttcctctcgagaaccggggctgtggtgaat
gagggcaggcggatgtggtcatga
DBGET
integrated database retrieval system
