Leucoraja erinacea (little skate): 129694242
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Entry
129694242 CDS
T09122
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129694242 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129694242 (chrne)
Ion channels [BR:
leri04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129694242 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OppC_N
Motif
Other DBs
NCBI-GeneID:
129694242
NCBI-ProteinID:
XP_055486930
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All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MIILNGEWCRLEGPNGLYSCTYFLCFYVSPLSPWEASPAVPIGIQLLGHEGLILQLVSSS
RLVQTWHTDQRHESPPAHTRLRQQPMAMASLLLLLLCLVSEASSNLEEKLFEKLFANYDK
RIRPAKNLGDINDVTLKLTLTNLISLNEKEEVLTTNVWFELQWVDYRLSWNESEYEGIDL
LRIPSGLLWLPDIVLENNVDGQFEVAYYANVLVYSSGSMYWLPPAIYRSACPIAVTYFPF
DWQNCSLVFRSQTYNAHEVKLDLSDENGQLVEWIHTDPGDFTENGEWSIKHKPAKKNINW
QFTKDDIEYQEVIFFLIIQRKPLFYVINIIAPCILISSLVVLVYFLPAQAGGQKCTLSVS
VLLAQTIFLFLIAQKVPETSLNVPLITKYLIFAMIVSTLIVMNCVIVLNVSLRTPNTHGL
SQKIKHVFLELLPQLLGMHLESSEDSWDKPQPRRRSSFGIMIKAEEYIVKKPRSELMFEQ
QRDRHGLKRINKTIADIDIGTTVDLYKNLAHFSPEIKSCVDACNFIAKSSKEQNDFGSEN
ENWILIGKVIDKACFWIALLLFTMGTVTIFLTGHFNQAPDFPFIGDSRKYAPE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatcatattgaatggcgaatggtgcaggctcgaagggccgaatggcctctactcctgc
acctattttctatgtttctatgtttcaccgctctccccttgggaagcctccccagctgtt
ccaatcgggatacagttactcgggcacgaagggttaatccttcagctggtgtccagcagc
cggctggtgcaaacctggcacactgaccagcgacacgaaagtccacccgcacacactcgc
ttaagacagcagccgatggccatggcctcgttacttctcctgctcctctgtctggtctca
gaagctagctccaatctggaagaaaagctttttgagaagttgtttgccaactatgataaa
cggatccgccctgcaaaaaacctgggagacatcaatgatgtgactctgaaacttacactg
actaatctcatctcactgaatgaaaaggaggaagtacttactacgaatgtctggtttgaa
ttacaatgggtagattatcgcctctcctggaacgagtctgaatatgaagggatagatctg
ctcaggattccatctgggttgctgtggcttcctgacatagtccttgagaacaatgttgac
ggccagtttgaggttgcttactatgccaacgtactggtctacagcagcggcagcatgtac
tggctgccacccgctatctatcgaagcgcttgtcctattgctgtgacttacttccctttc
gactggcagaattgttcacttgtattcaggtcccaaacctacaatgcgcatgaggtgaag
ttggatctatcggatgagaatgggcagttggttgagtggatccacaccgatcctggagac
ttcactgagaatggcgagtggtcgataaaacacaaaccggccaagaagaatatcaactgg
cagttcacgaaggatgacatcgagtaccaggaggtcatcttcttcctgataattcagagg
aagccgctgttctacgtcatcaacattattgccccgtgtatcctcatctcttcactggtg
gtccttgtctacttcctgcctgcacaagctgggggtcaaaaatgcaccctttctgtatct
gttcttctagcgcaaactatctttctgttcttgattgcacagaaagttccggagacatca
ttaaatgttccactcattacaaaatatttaatatttgcgatgatcgtatcaacgttgatc
gtaatgaattgcgtcatcgtcttaaatgtctccctgaggacccccaacacccacggcttg
tcgcagaagatcaaacacgtgttcctggagttgctgcctcagttgctgggaatgcacttg
gagtcttccgaggattcctgggacaagccccagcccagacgcagaagttccttcgggatc
atgatcaaagcggaggaatacattgttaagaagcccaggagtgagctgatgtttgaacaa
cagagagacagacacggtttaaagagaataaacaagacgatagcagatatcgatattgga
acaacagttgacctctacaaaaatctggcacacttctccccagagataaaatcctgtgtt
gatgcctgcaactttattgccaaaagcagcaaagaacagaatgactttggctctgaaaac
gaaaactggattctcattggaaaagtcattgacaaggcttgtttctggattgcccttctt
ctgttcactatgggaacagtgacaatcttcctcacagggcacttcaaccaagcaccagac
ttccccttcattggagactccaggaaatatgcaccggaatag
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