Leucoraja erinacea (little skate): 129694298 Help Entry 129694298         CDS       T09122                                  Name (RefSeq) dmX-like protein 1   KO K24155   rabconnectin-3a Organism leri  Leucoraja erinacea (little skate) Pathway leri04142   Lysosome Brite KEGG Orthology (KO) [BR:leri00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     129694298  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:leri04131]     129694298 Membrane trafficking [BR:leri04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     129694298  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     129694298    RAVE complex     129694298 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 HAND ThsA_Macro Motif Other DBs NCBI-GeneID:  129694298 NCBI-ProteinID:  XP_055486984 LinkDB All DBs Position 3:complement(88297648..88514583) Genome browser AA seq 2828 aa AA seqDB search MNLHQVLTGAVNPGDSCFSVGNVGEQPFTAYASGCDIVILASDFERLQIIPGAKHGNIQV GCVDCSMQEGKIAASYGNLVCIFEPIPLLNRESKHSTLNYQWQKSGQFVLESKAHNLAWD PQGIRLLTGSNSLQLWANENQEMDINEEEATDGTDPNEVNNWQCIWESETATPIHLLKVS PDGEFFATAGKDDCLVKVWYNSSSWQSAVMTPITPMDKEEDDIDFSFVYLAHPRAVTGFS WRKTSKYLPRGSTCHVLLTCCKDNVCRLWAETLLPSDSLLSGEGYTQWSESVTASSNLKR NISSREKLNIGPFRIGRRRSSGLVAHTGYLPNQLDAHELHRNVPLHANSLCHFHIAASIN PATDIPLLPSITSLSLSENEETNGPFVVHWLNNKELHFTLSMEVFLQQLRRSLEQPSPES GNEEFGQMENQSDEDKDAGEKTSSDVMVDHKIDMLLAEWNKNADMLFSIHPMDGSLLVWH VDWLDEYQPGMFRQVQISFASRIPVAFPTGDANSLSKSIVMYACTKNVDMAIQQGKQKPH GLTHSSSGMLISAGHNKSSGNLKLSIFTPNVLMISKHADGSLNQWAVSFAEESVFSTVLG VSHKSRYCGHRFHLNDLACHSVLPLLLTTSYHNALRTPDGMCLYNDGWSFDPLRCSSSWS SNQRENTTAAAFQDSNSIYSELILWRVDPVGPLSYSGGVSELARINSLHVSAFSNVAWLP TLIPSYCLGAYCNSPSACFVASDGRNLRLYQAVIDAKKLLSELSNPEISRLVGEVFSIVS QQSTARPGCIIELDAITELYGKETQLLHVFKEDFILVNQSMKRQKNERSGTNKTSPRQET EKPQNGFSEKFFLVVIEHKQNSQSLLHMWHLHLKSDPISIDHSTKNSLVPPEEQNGTSSE KIYSPFFKKYQACKANLQSASRLALISTRVYSRELPLPEGVEIIRATPSAGHLSSSSVHP ACLAPYLLATSCTDGKVRFWRCRVSALPMSSAAGDGVENDLVYSWEEWPLLIEEGLQNSS AVTVPGRPVDVCCSYTNRLAVAYKKSIPVHEHSSKHFTMHVGIFECESTGASQWIHEQTI HLDDFSQTGPILDPRISIDSNLVLHNKYRLHFSNDYQMTFDAKPLVHLDWVSKEDGSHIL TIGIGSKLLMYGQVSGIIQNQTKKEAPAVFSLSLWDSAKEVSQSRWILLRSLDLVSSVDG SLSLPVSLSWVRDGILVVGMDCEMHVYSQWQPPDKSDSMITEAESASIPSMVSLGKCAST NGSNQYLYKKSLAKSMTGLAQKFGGRKVPFHWNIEMEDSGLFEASHDLSPTLPQYHPLQL LELMDLGKIRRAKAILSHLVKCIAGEVITVSDTETSHERRLRSLTISASGSTARDPLTSN KSENPDYTEIDSIPPLPLCALLAADEDISHTTFEKKINCANFTKKNERHSTGNNYDELFA MSSVGADDLNSFDVDEGNKQKVIDLSQYSLTYFGPEHARVLSSHLLHSSLPGLTSMEQMF LMALADTVATISTDIGESRERTQGGETLDECGLRFLLAMRLHTFLLTSLPPVYRAQLLRQ GLSTCHFAWAFHSEAEEELLNMIPAMQRGDPHWSELRSMGVGWWVRSTVILRRCIEKVAK AAFQRNNDPLDGAIFYLAMKKKAVLWGLFRSLHDKKMTEFFGKNFNDDRWRKAALKNAFA LLGKQRFEQAAAFFLLAGSLKDAIEVCLERLHDIQLALVIARLYESEFEVSSTYKSILIE RILGFDKKSKDFNLSLRNSDPVLRSMAYWILEDYTNSLNTLLEQGTRDVDDSDGVTVPKL SVICQSLTNLRIFKVVFACPSNIVSSEEFLSPSEDVIAAQLKFGACLKILTSELRTLSTG YEVDGGKLRYQLNKWLEREIMALQKTCNYNVAEDRKDNSEGLWDELPNEEQMENGVIDQQ RTLHHQEYLQRRRLWLFQNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESQQIHVL HTIAASLSACLYQCLCDGHSNGSLYANQFTGMVYQSFLFTRQRLNRAASLDCSVTPNTSP DQWPGIKELIQLLNSAGDEDKPKLTVLLCEVLTAIYLSLFVHGLGTHSSNELFRIVTHPL NSNMWAAIFGGGAHVPATDQIQATATTVEALEELSDPELQIDPYHFSMSEAEVVKVTGEV APTDENHVSHFMSITPRPMIRDSETASPNHASPDVNQRIPVYKENFIPPELSIWDYFIAK PFLAPSQSKDEYDSDESQDSDDEDDAFSSDVQLQEHSNPNSFSWSLMRYAMVQLVLHKLK NFYPMAGLHLSELPVCSPSCHAILKTLQHWEQVLLRRLELFGGPPPDFISMHANEGTISS GPALLIHKVLLEPTNTPFKSKHHTALPVKRLWQYLVKQEEVQETFIRNIFTKKRCPNESV DNSNEKVRNSMTEEPSINKMETDAGYPGGRARIVHKESDIITAFAINKANRNCVAIATSH DIQELDVSAILATQIYAWIEDEFEQDSKGYEKSDEFLVVHAREDFGDLQCSTPYTPSVPG IPINMPWLGSTQTGRGASVMIKRNMNNARRMASHPTLPYYLTGAQDGSVRMFEWGHSHQL ACFRPSGNSRITRIRFNHQGNKFGIVDGDGYLSFWQTNPIALGATPKPYLTWQCHNKTAN DFVFVSSSTLIATAGQSSDNRNICLWDTLVPQSNSLIHAFTCHESGATVLAYASKQQLLL SGGRKGFICILDLRQRQLRQTFQAHDSPIKAIAVDPTEEYFITGSAEGNMKIWNLSTLNP IHTFSNEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTMKMRILPDRFSTGSGKLDIW QNDVKFIL NT seq 8487 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcatcaggtcctcaccggcgccgtcaatcccggcgacagctgtttctcagtg ggcaacgtcggcgaacaaccattcacggcctatgcctctggatgtgacattgtcatttta gccagtgattttgaaagacttcaaattatccctggggccaaacatggaaacattcaagtt ggatgtgtcgattgctccatgcaggaaggaaagattgcagcatcatatggaaatttagtt tgcatttttgagcctattccccttttaaatcgggaaagtaagcattctacgctgaattat caatggcaaaaaagtggacagtttgtattggagtcaaaggcgcataatttagcatgggat cctcaaggaatccgtcttttgacgggctccaattctttacagctctgggccaacgaaaat caagagatggatataaatgaagaggaagctacagatgggacagatccaaatgaagttaac aattggcaatgcatctgggaatctgaaactgcaacacccatccatctattaaaggtgtct ccagatggtgaattttttgccactgcaggaaaggatgattgtcttgtgaaagtgtggtac aattccagcagctggcagtcagcagtgatgacaccaatcaccccaatggacaaagaggaa gacgacattgatttttcctttgtgtatttagcccatcctcgggctgtgacaggattctct tggcggaagaccagcaagtacttgccaaggggctccacatgtcatgtcttgctgacctgc tgtaaggacaatgtttgtcggttatgggcagagacattactaccaagtgatagtttgctt tctggtgagggctacacccagtggtctgaatctgttactgcaagcagcaacctcaaaagg aatatttccagtcgggaaaagttgaatattggaccatttcgaataggcaggaggaggtca tctggccttgttgcacatactgggtatttaccaaatcaactagatgcacatgaactccat aggaatgtgcccctacatgcaaattcactttgtcattttcatatagcagccagtattaat ccagcaacagacattccgctcctgccttccatcacttcattaagtttaagtgaaaatgaa gaaactaatggaccctttgtagtccattggctaaataataaggagctgcatttcaccttg tcaatggaagtatttttgcagcagttgcgaagaagtttggagcagccatctccagagtct ggaaatgaggaatttggacagatggagaaccaatctgatgaagacaaagatgctggggaa aaaacttcttcagatgtgatggtagatcataagatcgacatgctgttagctgaatggaac aaaaatgcagacatgctcttcagtattcatcctatggatggctctttattggtgtggcat gttgactggttggatgaatatcaacctgggatgtttcgacaagtgcagatttcatttgcc tctcggattcctgttgcatttccgactggtgatgcaaactctctcagcaagagcatagtt atgtatgcctgcacaaaaaatgtagatatggctattcaacaagggaaacagaagccacat ggtctgactcattcctcatctggcatgttaatttctgctggccataataaatcatctggg aatctaaaactgagtatcttcacacctaatgtgctcatgatctcaaaacatgcagacgga tccttgaatcagtgggcagtcagctttgcagaagaatctgtattttcaacagtccttggt gtatctcataagtctcgttactgtggccatcgctttcatctgaatgacttggcttgccat tcagttttaccattacttttaactacttcataccacaatgcgctacgaacaccggatggc atgtgcctttacaatgatggatggagctttgacccattacgatgtagcagttcgtggtca agtaatcagagggaaaataccacagcagctgccttccaggattctaattcgatatatagt gaactaattttgtggcgagttgatcctgtcgggccattgtcgtattctggaggggtatcg gagttggcaaggatcaattctctgcatgtttcagccttttcaaatgtggcttggctgcca actctaatcccaagctactgtctaggtgcatactgcaactctcctagtgcatgttttgtg gcaagtgatggacggaacttacgattatatcaagctgttattgatgctaaaaagcttttg agtgagctttctaatccagaaatctctaggcttgttggagaggttttcagtattgtgagt caacagtccacagcaagaccaggctgcattattgaactggatgctatcactgaactttac gggaaagaaacacaattgcttcatgtctttaaagaggattttatattagttaatcaatcc atgaaaaggcagaaaaatgaaaggagcggaacaaacaaaacaagtccacggcaggaaaca gaaaagccgcaaaatggattttccgaaaaattctttttggtagtgattgagcataaacag aacagccaatcgctattgcatatgtggcatttacacctgaaatccgatccaatctccatt gatcactccactaagaattctttggtgcctccagaggaacagaatggcacttcctctgaa aagatatattcacctttcttcaaaaaatatcaggcttgtaaagcaaatttacaaagcgcc agtcgacttgctctcatctcaacaagagtttatagccgagagttacctctgccagaaggt gttgaaattattcgagccactccctctgcagggcacctgagttcctcatcagttcaccca gcatgtcttgctccgtatcttctggcaacttcctgcacagatggaaaagttagattctgg cgctgtagagtgtcagctcttccgatgtcttctgcagctggagatggtgtggagaatgat ctagtttattcttgggaagaatggcctctgctgattgaagaaggacttcagaacagcagt gcagttaccgtaccaggaaggcctgtggatgtttgctgttcatacacaaaccggctggct gtggcttacaaaaagtctattccagttcatgaacattccagtaagcacttcaccatgcat gtgggtatatttgaatgtgaatcaactggagcctctcaatggattcatgaacaaacaata cacttggatgactttagtcaaacaggtccaattttggacccaagaatcagcattgatagt aacctagtccttcataataaatatcgtttacatttcagcaatgattatcaaatgacattt gatgcaaaacctttggttcacttagactgggtctccaaggaagacggatcacacatatta actattggaattggatctaaacttctaatgtatgggcaggtatctggaataatacaaaat caaacaaagaaagaagcaccagcagttttctctttgtctttatgggatagtgccaaagaa gtatctcaatccagatggattcttctcagaagtttggatttggtttcctcagtggatgga tcattatcgctgccagtttctctgtcttgggtgcgtgatggtatcttggttgttggtatg gattgtgaaatgcatgtttattcacagtggcagcctcctgacaaaagtgattcaatgata actgaagctgaaagtgccagcattccttcaatggttagtctaggaaagtgtgctagtaca aatggatccaaccaatatctctacaaaaaaagcctggcaaagtcaatgacagggctggct caaaaatttggtggcagaaaggttccatttcattggaatattgagatggaagactctggc ctttttgaagcttctcatgatttatctcccacactaccacagtaccacccgctgcagctt ttggagttaatggacttgggtaaaatcaggcgggccaaagccatattgtctcatttagtt aaatgtattgcaggcgaagtaatcactgttagtgatactgaaaccagccatgagcgacga ctccgatctttgacaattagtgcaagtggcagcacagccagagatcctctaacttcaaac aaaagtgaaaatcctgattacacagaaatagactccatccctcctcttcctctctgtgca cttttagctgctgatgaagacatttctcatacgacctttgaaaagaaaatcaattgtgca aattttacaaagaaaaatgaaaggcattcaacaggaaacaactatgatgaactatttgca atgtcaagtgtgggtgcagatgatctaaatagttttgatgttgatgaaggcaataagcag aaggttattgacctttcccagtacagtcttacctactttggtcctgaacatgcacgagta ctatctagccatttgcttcattccagtctgcctggtcttaccagtatggaacagatgttt ttgatggcactggcagatactgtggccaccatcagcactgacattggagaaagcagagag agaacccaaggtggagaaacacttgatgaatgtggcttaagatttcttttagcaatgcgg ctacatacattcctattaacatcactaccacctgtttatcgagcacaacttcttcgacaa ggtttatctacatgtcattttgcctgggcctttcattcagaagcagaggaggagctgctg aacatgatccctgcaatgcaaagaggagatccccactggtcagagctcagatcaatggga gtggggtggtgggtgcgcagcacagtcattcttcgcaggtgtatagagaaggttgccaaa gctgcatttcaaagaaacaatgatcctttggatggagctatattttatcttgcaatgaag aaaaaggctgtactctggggcctattcaggtcccttcatgataaaaaaatgacagagttt tttggaaaaaatttcaacgatgatagatggagaaaggctgcattgaagaatgcgtttgcg ttattagggaaacagagatttgaacaagctgcagctttcttccttttggctggttcccta aaggatgcaattgaggtttgtcttgaaagacttcacgatattcagttagcacttgttata gcaagattgtatgaatcagagtttgaagtgtcctccacttacaagtctatacttatagaa aggatcctaggctttgataagaagagcaaagattttaacctttctttaagaaattctgat cctgtattgagaagtatggcttattggattctggaagattacacaaactctctgaataca ctattggagcaagggacgagagacgtcgatgattctgatggagtaacagttcctaagctc tccgtcatttgccaaagtttgaccaacctacggatattcaaggtggtgtttgcatgtcca agcaacattgtctcatctgaagaatttttaagtccttcagaagatgttatagcagcacaa ctaaaatttggagcatgtttgaaaatactcacatcggagctgcgtactctctctaccggt tacgaggtagatggtggaaaactccgctatcagttgaacaaatggctcgagagggaaatt atggccctacagaaaacgtgcaattacaatgttgcggaagacagaaaagataattctgaa ggtctctgggatgaattacccaatgaagagcagatggaaaatggagtcattgaccaacaa aggacattacaccaccaagagtatttgcaaagaaggcggctgtggcttttccaaaaccag ccgcttctaaggatgttccttagttattgtagtcttcatggatcacacggtggaggtttg gcatcagtcagaatggagttgattcttcttttgcaagaatctcagcagatccatgtattg cacactattgctgcttcgctgtcggcatgcctctaccagtgtctgtgtgatggccacagt aacggttctttgtatgcaaaccaattcactggaatggtctatcagagttttctgtttaca cggcaacgattaaacagagcagcgagtttagattgctcagtgactcccaatacatctcct gaccaatggccaggaataaaggaactgattcagctcttaaattcagctggagatgaagac aagcccaaattaacagttctactttgtgaggtgttgacagcaatttatcttagccttttt gttcatggtttgggaactcattccagtaatgagctgttccgtatcgtgactcatcccctt aacagtaacatgtgggctgcaatttttggtggaggtgcacatgtacctgcaacggaccaa atccaggccacagctacgacagtagaagcgttagaagagttatctgatccagagctgcag attgatccctaccatttcagtatgtctgaggctgaagtagttaaggttactggtgaggtt gctcccactgatgagaaccatgtcagccattttatgagcataacgccaagaccaatgatc agagattctgaaacagcctctcccaaccatgcttctcctgatgtaaaccagaggattcct gtttataaagagaattttatcccaccagagcttagtatctgggattactttattgcaaag cccttccttgccccgtcacagagcaaagatgaatatgattcagacgaaagccaagatagt gacgatgaagatgatgcattttcttcagatgtacagcttcaagagcattcaaatcctaat tctttcagctggtcactgatgcgatatgctatggtgcagttggtgctgcataaattaaag aacttttacccaatggcaggcctgcatctttcagaactcccggtttgttctccttcttgt catgcaattttaaagacacttcagcactgggaacaggtactacttcgacgacttgagtta tttggtggtccacctccagacttcatctcaatgcatgccaatgaaggcacaatatcttca ggtcctgcccttctcatccataaagtgttactagaaccgacaaatacgccattcaagtca aaacatcatactgcacttccagttaaaagactttggcagtatcttgtgaaacaggaagag gtgcaagagactttcattagaaatattttcaccaaaaaaagatgtccaaatgagtcagta gacaactccaatgaaaaagtcagaaattctatgacggaggaacctagcatcaacaagatg gaaacagatgctggttatcctggtggtagagcgaggattgttcacaaagaatcggacatc attacagcattcgcaataaataaggctaataggaattgcgttgccatcgccaccagccat gatatccaagagctggatgtttctgcaatcttggcgacccagatttatgcttggattgaa gatgaatttgaacaggattcaaaagggtatgaaaaatcagatgaattcctggtggttcat gcgagagaggattttggtgatttgcagtgcagcactccatatacccccagtgttcctggc atccctataaacatgccatggttaggcagcacacagactggaagaggagcatctgtgatg ataaagaggaatatgaataatgccaggagaatggcttcacatccaacactaccttactat ctgactggtgctcaagatggcagtgttcggatgtttgaatggggccactcgcatcaacta gcatgctttcgaccttctggtaattctagaataacaagaatccgatttaatcatcagggt aacaagtttggcattgtagatggagatggatatctgagcttctggcaaacaaatccaatt gctttaggagccactccaaaaccttatttgacttggcagtgccataacaaaacagcaaat gattttgtttttgttagttcctctactttaatagctacggcagggcagtctagtgataac aggaatatctgcctctgggatacacttgtgccacaaagtaatagtctcattcacgcattc acatgtcatgaaagtggagctactgtgttggcatatgcatcaaagcagcagcttttatta tctggtggaagaaaaggtttcatctgtatacttgatctacgccagcgacaattacgtcag acgtttcaggctcacgattcgcctattaaagcgattgctgtggatccaacagaggaatac ttcattacagggtctgctgagggtaacatgaagatttggaatttgtccactctcaacccg attcatacattctcaaatgagcatgctcgacagtcgctcttcagaaacataggaacaggg gtcatgcaaatagagactggtccggcaaatcatatattctcctgtggagctgatgggaca atgaaaatgaggatcctgccagatcgctttagcacaggaagtggaaaattggatatctgg caaaatgatgtaaaatttatactataa

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