Leucoraja erinaceus (little skate): 129694648
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Entry
129694648 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129694648
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
129694648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_17
TPR_8
TPR_12
TPR_1
TPR_19
RMD1-3
TPR_CcmH_CycH
TPR_11
TPR_7
TPR_Psidin_N
ARM_TT21_N
TPR_16
TPR_9
CFAP70_TPR_C
ANAPC3
TPR_15
TPR_10
ARM_TT21
NatA_aux_su
TPR_MalT
TPR_YpiA_C
TPR-S
PRP6_TPR
MIT
Cohesin_load
RNPP_C
Iml2-TPR_39
ANAPC5
HAT_PRP39_C
VPS18_solenoid_2nd
EST1_DNA_bind
TOM20_plant
Motif
Other DBs
NCBI-GeneID:
129694648
NCBI-ProteinID:
XP_055487354
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSSRMGDLLKEKLDQLQCHFTWSPQKETIDLDDMVYRLQDAIIFADKYQAASYNQLAFVN
CLQGNSEEAIQNLKEAEKILRENHKDAFERNSIITYGNYAWVHYHMGQLDKAQSYLDKLE
MICKPLTDGPRYTAMIPEVYGEKGWSLLSSAAQYYEEAMKCFEKALEEDPNNTEWIMGKA
TVLSRLEAFSGTPESRERNQSVKYLRRVLELDPDDSMAMVLLALKLKGFRKSEEANKLVE
QALQKCSKNPYVLRYSARFYRKEGAVEKAINLFKQALELTPHSAYTHHQIGICYNIKLNN
LGNINPRSPATQQQTELISLCIYHFGKASECRPKTAIKPMLDLAKIYIINAEYSKAEEIY
NNLMKLEDIRPENEQQICLGAGSFEFYQKGSESSAISLFLKGVKIEYDSGERKQCKKKLE
KWADKKLRYAPHDSRALGVRGLMYKMDGNKSKAIEYFEKALKIDHENEEYLSALSELRLS
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagaatgggagatttgttgaaagagaagctcgatcagcttcagtgtcacttc
acgtggagcccacagaaggagaccattgacctggatgatatggtgtacagattacaagat
gccataatctttgcagataaatatcaagctgcatcctacaaccaactcgcttttgtaaac
tgcctgcaaggcaacagtgaggaagctattcaaaacttaaaggaagctgaaaagattctg
agggagaaccacaaagatgcatttgaaagaaacagcatcatcacctatggaaactatgcc
tgggtgcattaccacatgggacaactggacaaggcccagtcctacctcgacaagctggag
atgatctgtaaaccactcactgatggtcctcgctatacagcaatgatacctgaagtgtat
ggggagaaggggtggtcattgttgagctcggcagctcaatactatgaggaggctatgaaa
tgttttgagaaagctctggaggaagatcccaataacacggagtggatcatgggcaaagca
actgttctgtcccgtctggaagcattttctggaaccccagagagtcgtgaacggaatcag
tcagtgaagtatctgcggcgtgtactggagctagatccagatgattcaatggccatggtg
ctgctggccttaaaattgaaaggattcaggaaaagtgaagaagcaaataaattagttgag
caagcattgcagaagtgcagtaagaatccatatgtgcttcgttattcggcaagattttac
agaaaggaaggagcagtggagaaagcaatcaatctattcaagcaggcgttagaattaact
ccacactcggcttacacacaccaccaaattggaatatgttataatattaaactgaacaac
cttggtaatataaatcctcgcagccccgcaactcagcagcaaactgagttgatcagtcta
tgtatatatcactttggaaaagcctctgagtgccgtccaaagacagctattaaaccaatg
ctggacttagccaagatttacataataaatgcagagtattctaaggctgaggagatctac
aataatctgatgaaattggaggacatccgtccagaaaatgaacagcagatatgtttaggg
gctgggtcatttgaattctatcagaaaggatcagaatcaagtgccatcagcctatttctg
aaaggggtgaagattgaatatgattcaggagaacggaaacagtgtaagaaaaaattggag
aagtgggcagataaaaaacttcgctatgctccacatgacagcagagctcttggtgtgaga
gggttaatgtataagatggatgggaacaagtccaaggctattgaatactttgaaaaggcc
ttgaagattgatcatgagaatgaagaatatctgagtgctctttcagaattacgtcttagt
gattga
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integrated database retrieval system
