KEGG   Leucoraja erinaceus (little skate): 129694861
Entry
129694861         CDS       T09122                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04145  Phagosome
leri04210  Apoptosis
leri04517  IgSF CAM signaling
leri04530  Tight junction
leri04540  Gap junction
leri04814  Motor proteins
leri05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    129694861
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129694861
  09143 Cell growth and death
   04210 Apoptosis
    129694861
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129694861
   04540 Gap junction
    129694861
  09142 Cell motility
   04814 Motor proteins
    129694861
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129694861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129694861
   03036 Chromosome and associated proteins [BR:leri03036]
    129694861
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:leri04812]
    129694861
   04147 Exosome [BR:leri04147]
    129694861
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129694861
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     129694861
Cytoskeleton proteins [BR:leri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    129694861
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129694861
  Exosomal proteins of other body fluids (saliva and urine)
   129694861
  Exosomal proteins of colorectal cancer cells
   129694861
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 129694861
NCBI-ProteinID: XP_055487593
LinkDB
Position
Unknown
AA seq 415 aa
MPTDSTIGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDADNNYARGHCSIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFSVYPAPQISTAVVEPYNAVLVTHCTLEHSDCAFMVDNEAIYDLCRR
NLDIERPTYTNLNRLLAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPI
ISAEKAYHEELSVPQLTNACFEPANQMVKCDPRQGKYMSCCMLYRGDVVPKDVNASIATI
KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISMAWTRLNLKF
DKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYQEVAVDSADLERRGEEEE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgcccaccgactcgaccattggaggcggcgacgattcgtttaacaccttcttcagcgag
acgggggcgggcaagcacgtaccaagggccgtgttcatcgacctggagcccacggttatc
gacgaggtgcggaccggcacctaccgccagctcttccaccccgagcagctcatcaccggc
aaggaggacgcggacaataactacgcccggggccactgctccatcggcaaggagatcgtg
gacctggtcctggatcgcatccggaagctggccgatctgtgcaccggactccaggggttc
ctcatcttccatagtttcggcggcggcaccggctcgggcttcacctccctgctgatggaa
agactatctgtcgactacggcaagaaatccaagctggagttttccgtctacccggcgccg
cagatctccaccgccgtggtcgagccctacaacgcggtgctggtcacccactgcaccctg
gagcactccgactgcgccttcatggtggacaacgaggccatttacgacttgtgccggcgg
aacctggacatcgagcgccctacctacaccaacctcaaccgcctgttggcgcagatcgtg
tcgtccatcaccgcctcgctgcgcttcgacggggccctcaacgtggacctgactgagttc
cagaccaacctggtcccctacccgcgcatccacttcccgctcgtcacctacgctcccatt
atctcggccgagaaggcttaccacgaggaactgtccgttccacaactgaccaacgcctgc
ttcgagccggccaaccagatggtgaagtgtgatcctcgccagggcaagtacatgtcgtgc
tgcatgttgtaccgcggggacgtggtgcccaaggacgtcaacgcctccatcgccaccatc
aagaccaagcgctccatccagttcgtggactggtgcccgaccgggttcaaggtgggcatc
aactaccagcccccgacggtggtgccggggggtgacctggccaaggtgcaacgcgccctc
tgcatgctgagcaacaccaccgccatctccatggcttggacccgcctcaacctcaagttc
gacaagatgtacgccaagcgggcttttgtccactggtacgtgggagaggggctggaggaa
ggggagttccaggacgcgcgggaggacatggcgtcgctggagaaggactaccaggaggtg
gccgtggattccgccgacttggagagacggggtgaagaggaagaataa

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