Leucoraja erinaceus (little skate): 129694900
Help
Entry
129694900 CDS
T09122
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129694900 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129694900 (xrcc5)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
129694900 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
129694900
NCBI-ProteinID:
XP_055487630
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MAAKSAIVLCWDVGYTTNVVPPGEESSFEQAKKVVLLFLQRQVFAENKDETALVLFGTDE
TFNPLAKPDQYQHISVYKNLMIPDFDLLEDVQSRIVTSNEQADFLDALIVCMDLLQEQTL
GKKYEKLHIAVLTDLNSPFSYDQLDVITHNMKRAGITLQFFLPFALDATNMGDSGDAAER
RSNISHGKGLTAQQRDGMRMVQRVMQSLDEEGGLDEVFTFRESVEQLSIFKKIARKPMAW
PCQLTIGSGITINIVAYKAITEEKCKKSWTSVDAKTLRKEDVRRETVYCLNDDNETEVTK
EDTIQGFRYGSDIIPFSRVDQDQMKYKTNGKCFSVLGFTKSAQVPQHYQVGRQTLKVFAA
KDDEHAAVALSALLHSLEELQMVAIVRYVYDRRSNPQIGVAFPLIKDKCECLIYIQLPFM
EDLRQFTFASLKNSKKAATSEEQLEAVDALIDSMSLVMDDEEELEDLFKVNKLPNPHFQR
LFQCLQWKAFHPDEPLPSPNPHLKSMLDQPREIVDSSLAALEQLKKLFTLQDSGKKKEHK
IAQQIFKDNAPEEPDAKRARSDEDFNIVTLAEGTVTAVGSLNPVSDFQALVHQKSVNFRE
VTKQLMGRVYQFLEVKNQQYYIKSLDCIKVCRKESVKAGESQHFNTILQTLKESVDTKGL
QEFWEMIVQDSVSLITSNEDAGSTVTSEEAKQFLLPEETPMDEKAVSMDEGDVDELLDLM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagagtgccattgttctatgctgggatgtgggatatacaacaaacgtcgtg
ccaccaggggaagaatcatcatttgaacaagcaaagaaagttgtgctgctatttctccaa
cgtcaagtttttgctgagaataaagatgagacggctttagtcctgtttgggactgacgaa
acctttaacccacttgctaaaccggaccaataccagcacatttctgtgtacaaaaacctg
atgatccctgactttgatctcctggaagatgttcaaagtcgtattgtgacaagtaatgag
caagctgactttctggatgccctaattgtctgcatggacttgcttcaggaacagaccttg
gggaagaagtatgagaagttgcatattgcagtactgaccgatctgaatagtcccttcagt
tatgaccagctggatgtcatcacacacaacatgaaacgagctggaataacgctgcagttc
ttcttgccctttgcactggatgcgaccaacatgggagacagtggagatgcagcagaaaga
agaagcaacatttcacatgggaaaggtctaacggcacaacagagagatggaatgcgaatg
gttcagagagttatgcagtcgttagatgaagaaggaggactagatgaagtcttcactttc
agggaaagtgtggaacaattgtccatatttaagaaaattgcaaggaagccgatggcatgg
ccgtgccagctcaccattggctccggaatcaccattaacattgtggcatacaaagcaata
acagaggaaaaatgtaaaaagagctggacatctgttgatgctaaaacgttacggaaggaa
gatgtgaggagagagactgtttactgcttgaatgacgacaatgagactgaagttacaaag
gaggacactatccaaggattccgttacggcagtgacattattccgttctcacgtgtggat
caggaccagatgaagtacaaaactaatggcaaatgtttcagtgtccttggatttaccaag
tctgcacaagtcccgcaacattatcaggttggacggcaaacactaaaggtctttgctgca
aaggatgatgagcatgctgcagtggctttgtctgcactgcttcactcactggaagagctg
caaatggtggcgatagtgcgttatgtttatgaccggcgatcaaacccacaaattggagtg
gcctttcctttgatcaaagataaatgtgagtgcttgatttatattcaactccccttcatg
gaggatctacggcagtttaccttcgcttctctgaagaacagtaagaaagctgcaacttca
gaggagcagttagaagctgtggatgctctgatcgactcgatgagcttagtgatggatgac
gaggaagagctggaggatctcttcaaagtcaacaaacttccgaatcctcactttcagagg
ctgtttcagtgtcttcagtggaaagcatttcatccagatgaacctcttccttccccaaac
cctcacttgaaaagtatgttagaccaaccccgggagatcgttgattccagcctggcagca
ttggagcagttaaagaagcttttcactctgcaagattcaggcaagaagaaagagcacaag
attgcacaacagatcttcaaagacaatgctccagaagaaccagatgcaaagagagcgcgg
tctgatgaggattttaatattgtcacgttagcagaaggaactgtgacagctgttggcagt
ctcaatccagtatcagacttccaggctctggtccatcaaaagagcgtcaatttcagagaa
gtgaccaagcagctaatggggcgtgtctaccaattcctggaggtgaagaatcaacaatat
tacatcaagagcttggattgcatcaaggtttgcaggaaggaatctgttaaggcaggggaa
tcccaacatttcaacacgatactgcaaacactgaaagagagtgtggacaccaaagggctg
caagagttctgggagatgattgtacaagattctgtctctctcatcacaagcaatgaagat
gcaggaagtacagtgaccagtgaagaagccaagcagtttctgctcccagaagaaactccc
atggatgagaaggcggtgagcatggatgaaggagatgtcgatgaactgcttgatctgatg
taa
DBGET
integrated database retrieval system
