Leucoraja erinaceus (little skate): 129694917
Help
Entry
129694917 CDS
T09122
Symbol
apex1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129694917 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129694917 (apex1)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
129694917 (apex1)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
129694917 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
129694917
NCBI-ProteinID:
XP_055487647
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MPKRRREETDPSAGQPKAEPAPPAEGGATFVDTPDQLTTSDGQESCLKISSWNVDGLRAW
VKKNGLEWVGLESPDVLCLQEIKCTDPEKQVPAAMKEMVDYPHQYWSSSKSKEGYSGVAI
LCKAEPLNVTYGIGVEEHDGEGRLITVEMEKCFVVSVYVPNSGRGLVRLDYRQAWDGALR
GYLEELQSRKPLVLCGDLNVAHDDIDLKNPKTNRKSAGFTPQERQGLDQLLGLGLVDTFR
HLHPSLPHAYTFWTYMGNCRAKNVGWRLDYLLLSRSLLPRLCDSKIRTKIMGSDHCPVTL
LLAL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagacgccgggaagagacggacccctctgccgggcagccgaaggccgagccg
gccccaccagctgaggggggagcaacgttcgtggacacccccgaccagctgaccaccagc
gacgggcaagaaagctgcctgaagatcagctcatggaatgtggacgggctgcgcgcctgg
gtcaagaagaatggcctggagtgggtgggtttggagagcccggacgttctgtgtctacag
gagatcaagtgcacggatccagagaaacaggtgccggcggccatgaaggagatggtggat
tatccgcaccagtactggtcgtccagcaagagcaaggagggctatagtggggtggccatc
ttgtgtaaggctgaacccctcaacgtcacctacggcatcggagtcgaggagcacgatggc
gagggccggctgatcacggtggagatggagaagtgttttgtggtgtcggtctacgtgcca
aactcgggccggggcctggtcaggctggattatcggcaggcctgggacggggccttgcgc
gggtacctggaggagctacagagccggaagcccctggtgttgtgcggggacctgaatgtg
gcccacgatgacatcgacctgaagaaccccaagaccaaccgcaagtcggcggggttcacc
ccccaggagaggcagggcctggaccagttgttgggtctgggtctagtcgacacctttcgc
cacctccacccctccctgccccacgcctacaccttctggacctacatgggcaactgtagg
gccaagaatgtgggctggaggctcgactacctgttactctcccgctccctgctcccccgc
ctctgtgacagcaagatacgcacaaagatcatggggtcagaccactgccccgtcaccctg
ctgctggccctctga
DBGET
integrated database retrieval system
