Leucoraja erinaceus (little skate): 129695209
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Entry
129695209 CDS
T09122
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04217
Necroptosis
leri04620
Toll-like receptor signaling pathway
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129695209 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129695209 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129695209 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
leri04054
]
129695209 (tlr3)
04090 CD molecules [BR:
leri04090
]
129695209 (tlr3)
Pattern recognition receptors [BR:
leri04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
129695209 (tlr3)
CD molecules [BR:
leri04090
]
Proteins
129695209 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
Tlr3_TMD
TIR
LRR_LRWD1
TIR_2
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
129695209
NCBI-ProteinID:
XP_055487963
LinkDB
All DBs
Position
3:complement(7566529..7586880)
Genome browser
AA seq
902 aa
AA seq
DB search
MCFQALALWMGLAVSCFSTIACESQCKIKELTADCSHLKLSAVPPDLPVNLTEINLSHNQ
LKRLPSSVLARYTRLRILRVGYNVIPKIDGSLCQALPFLDVLALEHNQLSTLPARCFSTC
RNLTELYLQYNRIKLIAADVFGGLQGLQILDLSHNQLVSARIGVDLQLPKLQSLLLSANK
IVQLKPNDFAILRNTTLYQLDLSFNKLTQFEPKCFSSIGSLRIVVLNNVALQPNITKQLC
DALSGTDITTLFLRNTYLKLEANTFSGLAKTKLAFLDLSNNRLTRLPGKAFQWLPHLEYL
NLEDNAIGHIANETFTGLDNLKSLNLQKSLKAQGMSDKVHSSIEDYSFQGLKKLVSLNLE
HNTIAGIKEHTFSGLTSLQYLSLYNCQVDFKTISNETLVSLAESPLVILNLTRTKISSLK
AGAFSSFNKLKKLDLGLNSISQILTGEEFQGLSSIEEIYLSYNYKLTLTSSSFIHVPSIR
ALMLSKSRVATLSLQPSPFRPLRNLTVLDLSNNNLANVDRDVFLGLVRLQVLKLQHNNLA
RLWKSSNPGGPVLYLSGLADLRMLDMQSSGLDEVPPRAFQGLVKLETLDLSLNNINFLPD
HVFDDIESLKSLHLRKNLVTSVSRDVFGQVFRNLTALYMGSNPFDCTCASIAWFVTWVNS
TNSSIPGMDTQYICNTPLSYHNSSVASFDTSPCKDAVPFKGAFIISSSVILVFLVSVLLL
QFQGWRLEFYWNVSVNQMFGFKEIDRPDAHFAFDAYIVHAKRDVEWVNDYLMPLETYEQF
KFRFCLEERDSEAGVSELESIVANINRSRKIIFVMTGELLTDPWCRRFKVHHAMQQVIQQ
SRDAIVLIFLQDIPDYKLNQMLCLRRGMFKSRCILNWPAQDDRIPAFYQKFKVALGSSNK
VQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttccaagcattggctttgtggatgggcctcgctgtctcgtgtttcagcaccatc
gcctgtgaaagccaatgtaagataaaggagctgaccgctgattgcagtcacctgaagctg
tctgcggtccctccggacctgcctgtcaacctcaccgaaatcaacctctcccacaaccag
ctgaagcgcctgcccagctccgtgttggccaggtacaccaggcttcgcatcctgcgtgtc
ggctacaatgtcatccccaagatcgacgggagcctctgccaagccctgcccttcttggac
gtgctcgctctggaacacaaccagctatccacgctccccgcacgatgtttctccacctgc
agaaacctgactgaattgtacttgcagtacaacagaatcaagctgatcgccgctgatgtt
tttggtggccttcagggattgcaaatcctggacctgtctcacaatcagctggtgtcggcc
agaatcggagttgatctgcaattaccaaagctgcaaagcctcctgctgtctgctaacaag
attgtgcagttaaaaccaaacgattttgccatccttcgcaacaccacattgtaccagttg
gacctgtccttcaataagctaactcagtttgaacctaagtgtttcagcagcattgggagc
ctacgcattgtggttttgaacaatgttgctctccagcccaatatcacgaagcaactgtgt
gatgcattgtcgggaacagatataaccacactatttctgaggaacacctacctgaaattg
gaagcaaataccttctctggattagcgaaaactaagctggcgttcctagacttgtcgaac
aacaggctaaccagattgccgggcaaagcgttccaatggttgccccacttggagtatctc
aatctcgaagacaacgccatcggacatattgccaatgaaacatttactgggttggacaat
ttaaagagcctgaacctgcagaaaagcctcaaggcacagggcatgtcagacaaagtacat
tccagcattgaagactactccttccaagggttgaaaaagctagtctctctcaatttggaa
cacaacaccatcgcgggtatcaaggagcataccttctccggcttaacgagcctccaatac
ctcagcttgtataactgtcaggtggattttaagacgataagcaatgaaacgctggtgtct
cttgctgagtctccactcgttattttgaacttgacaagaacaaagatctcaagcttgaag
gcgggtgcgttctccagcttcaataagctgaagaaactggacctgggcctcaattccatc
tcccagatcctcaccggagaggaattccaggggctgagctccatagaggagatatacctc
tcgtacaactacaaactgactctcacatcctcctcattcattcacgtcccttccattcgg
gccttgatgctcagcaagtccagggtggccaccttgagtctccagccgtcgcccttccgg
cctcttcgaaatctcaccgtcctcgacctcagcaacaacaacttggcgaacgtggatcga
gatgttttcctggggctcgtgcggcttcaggtactaaagctgcagcacaataacttggcc
cgactctggaagagttccaacccaggcggacctgtcctgtacctcagtggtttggcggat
ctgcggatgctcgacatgcaatccagcggactggatgaggttccacccagagctttccag
ggcttggtcaagctggagacgctcgatttaagtttgaacaacatcaacttcctcccggac
cacgtgtttgacgatatcgagtcactcaagtccctgcacttgcggaagaacctcgtcacc
tccgtctcgagggacgttttcggccaggtgtttcgcaatttgacggccctctacatgggg
tcgaaccctttcgattgtacgtgtgcaagcattgcctggttcgtgacttgggtcaatagc
accaacagtagcatccctgggatggacacccaatacatctgcaacacccccctgagctac
cacaacagcagcgtcgcgtcttttgacacctctccctgcaaggacgctgtccctttcaag
ggggccttcatcatcagcagcagtgtcatcttagtcttcctggtcagcgtgctcctgctg
cagttccaaggctggaggctggaattctactggaatgtctccgtcaaccagatgtttggc
ttcaaggagatagaccgcccggacgcccactttgcgttcgacgcctacatcgtccacgcc
aagcgcgacgtcgagtgggtcaacgactacctgatgcccctggagacgtacgagcagttt
aagttccgcttctgcctggaggagagggactccgaagctggcgtctccgaattggagtcc
atcgtggccaacataaaccgaagcagaaaaatcatcttcgtcatgaccggggagcttcta
acggatccctggtgcagaaggttcaaggtgcatcatgcaatgcagcaggtgattcagcaa
agcagggatgccattgttttgatctttttgcaagacatccctgactataagttgaaccag
atgctttgcctccgcagaggtatgtttaaatcacgctgcattctgaactggccagcgcag
gatgaccggatcccagccttttaccagaagtttaaggttgcacttggctcaagcaataag
gtgcagtga
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