Leucoraja erinaceus (little skate): 129695225
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Entry
129695225 CDS
T09122
Name
(RefSeq) PDZ and LIM domain protein 3-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129695225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129695225
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129695225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129695225
NCBI-ProteinID:
XP_055487979
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All DBs
Position
3:7982691..8038125
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AA seq
321 aa
AA seq
DB search
MPQNVVLNGPGPWGFRLTGGADFNQSLTVSRVTPGSKASLANLSPGDVILAIDGASTDNM
AHVDAQNRIKAAYDMLSLKIDRPETKLWSPQVSEGGKANPFKINLEAEPQEIKSIGESHN
RKAQPFLAGNIDENRQVVSSSYNTPIGLYSAGNIQDALQGQLRGLVIEPQETSDPAPGVQ
QSDVYKMLHEDQEESNEPRQSGSFRAIQDYLESDESADKGNRPAVTKSVRAPVTKVGASA
GSVQKLPLCDKCGNGIVGTVVKARDKYRHPECFVCADCEVNLKQKGYFFIEGQLYCEDHA
RARTKPPEGYDAMPVYPNMKA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaacgtggtactgaacggaccgggcccctggggattccgactgaccggcggg
gctgattttaaccaaagtttgaccgtctctcgggtgacacctggaagcaaagcttcactg
gctaatctctccccaggcgatgttattctggccatcgatggagcgagcacagacaacatg
gctcatgttgatgcacagaacagaatcaaggctgcatacgacatgctgagcctcaagatc
gacagacctgaaacaaagctctggtctcctcaagtgagtgaaggtggcaaagcaaatcca
ttcaagattaatttggaggcagaaccacaggaaatcaaatctattggcgagtcccataac
aggaaagcccagccgtttctggcgggaaacattgatgagaacaggcaggtagtcagctcc
agctataataccccaattggcctgtactcagccggcaacatacaggatgccctgcagggc
caactccgaggcctggtcattgagccacaggagacgtcagacccagcgcctggagttcaa
cagtcggatgtttataaaatgttgcacgaagaccaggaggagagcaatgagccgagacaa
tctggctccttccgggcaatccaggactacctggagtcagatgaaagtgctgacaaaggc
aatcgcccagctgtgaccaaaagcgtgagagctccagtgacgaaggtcggtgcgtcggcg
ggtagcgttcagaagctgccgctctgtgacaagtgcggaaacggaattgttgggacggtg
gtgaaagctcgtgacaagtaccggcaccccgagtgctttgtctgcgcggactgtgaggtg
aatctcaagcagaagggatacttcttcatcgaaggacagctctactgcgaagaccacgcc
agggcgcggaccaagccgcctgagggatatgacgccatgcctgtctatcccaacatgaaa
gcttaa
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