Leucoraja erinaceus (little skate): 129695297
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Entry
129695297 CDS
T09122
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00512
Mucin type O-glycan biosynthesis
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
129695297
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
leri01003
]
129695297
Glycosyltransferases [BR:
leri01003
]
Glycan extension
O-Glycan
129695297
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Gene cluster
GFIT
Motif
Pfam:
Branch
DUF5027
Motif
Other DBs
NCBI-GeneID:
129695297
NCBI-ProteinID:
XP_055488092
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All DBs
Position
3:complement(12794005..12805613)
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AA seq
453 aa
AA seq
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MYCKISSGRFHLKKILWLFVTLPLICLLKLYSNRVDQGSRKTWLVEPLWSTSSLVWNRKS
VKYLESKTEINCTDIYNYSPVEVGKTLEIRKGNIVDLEDEDVELMTSNCTQYLYQRGYHN
NVASHEEQEYPLAFSLVVHREAIMVERLLRMIYLPQNIYCIHYDQKSSKSFKAALDNLAR
CMPNVFIATKIELVRYTQISRLRADLNCLSDLLKSSVRWKYIINLCGQDLPLRSNFELVS
ELMKLNGANMLESVKPSAGKAQRFMFRHTSQTSPSGNQDTLIKTDVKKDPAPHGIEMFTG
SAYFVLNRDFAQYINNSTVAKDFLAWSADTYSPDEHFWASMVRVPGVPGGLPSSAAEVTD
MQSKTRLVKWEYMEGSAYPPCTGTHVRSVCVYGSAELRWLLDKGHWFANKFDPKVDPVLI
KCLELKIMERQRNWLRLNSRMVHVFSPGEDFWV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtattgcaagatatcctctggaagatttcacctgaagaagatcctatggctgtttgtc
actcttccactgatctgcctcttaaaactctattccaaccgcgtagaccaaggctcacgg
aagacctggctagtggagcccctctggagtacctcctcacttgtgtggaacagaaagagt
gtgaagtacctggagtccaagactgaaatcaattgcaccgatatctacaactacagccca
gtggaggtgggcaaaaccttggagatacgcaagggtaacattgttgatttggaagatgaa
gacgttgagttgatgacctcaaactgtacccagtacctttaccagagaggatatcacaac
aatgtggcctcgcacgaggagcaagagtatccactggccttttctctggttgttcatagg
gaagccattatggtggagaggttactaagaatgatctacctgcctcaaaatatatactgc
atccattacgaccagaaatcctcaaagtctttcaaagctgccttggacaatttagccagg
tgtatgccgaatgtattcattgcaacaaagatagaattggtgcgttatactcaaatctcc
agactgcgcgcagatctcaattgcttgtccgatctactcaaatcctcggtccggtggaag
tatattatcaacttgtgtggccaggatttacccctgcggtccaacttcgagctggtttcc
gaattgatgaagctgaacggagccaacatgttggagtcggtcaagcccagtgctgggaag
gcccagcgattcatgtttcgccacacgtctcaaactagtccgtctgggaaccaagacacg
ctcatcaaaacggacgtgaagaaagatcctgccccccatggcattgagatgttcaccggc
agtgcctactttgtgttgaatcgtgactttgcccagtatatcaataacagcacggtagcc
aaggatttcctagcgtggtccgcagatacatactcgccggatgagcacttttgggcaagt
atggtgagagtgcccggggtacctggtgggctgcccagctctgcggccgaggtgactgac
atgcaaagtaagaccaggctggtgaagtgggagtacatggaggggagcgcgtacccacct
tgcacgggcacccacgtccgcagtgtctgtgtgtacggttccgcagagctcaggtggctc
ctggacaaaggccactggttcgccaacaagttcgaccctaaagtcgacccagtgttaatc
aagtgcctggagctaaagatcatggagcgacagaggaattggctgagattgaattctcgg
atggtccatgttttcagtcccggagaggacttctgggtctga
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