Leucoraja erinaceus (little skate): 129695311
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Entry
129695311 CDS
T09122
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129695311 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leri03009
]
129695311 (utp15)
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129695311 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
WDR54
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
129695311
NCBI-ProteinID:
XP_055488115
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Position
3:complement(14147084..14174120)
Genome browser
AA seq
527 aa
AA seq
DB search
MSSYKPTVIQHYPKLGNTVTQDTLYWKKYRPPVQIKEFGAVTHIDISSVAPYNYAVTAST
RIHIYGRYSQEPIKTFSRFNDTAYCGTYREDGKLLVAGCEDGVIRLFDVDGRAALRQYNG
HTKAVQVTAFTSDKYRLMSGSDDYTVRLWDIPTASKLCTFTEHTDYVRCGCTSNLNADVF
VTGSYDHTVKVFDARMDQSVMTMDHGQPVESVLLFPSGGLLVSAGGRFVKVWDMLKGGQL
LASLRNHHKTVTCLCLSSSGERLLSGSLDRHVKIYSTSTYKVVHNINYAASILSLALAPE
NEAIVVGMANSVLNIRHRKRHDKKNEVGEVTKKRKRPSYKYFIKGKDYMPKKNDFLVSKP
VRQHLKKYDKLLKSFEVSRALDAVLQSNIRVKNPEVTIGVMQELNRRGTLQNALAGRDEK
QLAVILNFLNRNVVDPRFTAVLVNVAEIIIGIYSSVIGESSVIDKQFMKLQELTEREIDY
QEELLGVLGMMDTLFATMTTKKEAVVPRNLNCALITGAEQAKPMAIA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttacaaaccaaccgtgatccagcactacccgaaacttggaaacacagtcaca
caagacacgctatattggaaaaaatataggcctccagttcagatcaaagagtttggtgct
gtgacacacatagatatctcttcagttgctccctacaactatgctgtaactgcctctaca
aggatccacatatatggtcgatattctcaagagcccataaaaacattctcccgatttaat
gacacagcgtactgtggcacgtacagagaagatggaaagctgcttgttgcaggctgtgag
gatggtgttattcgcctttttgacgttgatgggcgtgcagcactacgacagtacaatgga
catacaaaagcggttcaagtaactgcattcacatctgacaaataccgtttgatgtctggg
tcagatgattacacagttcggctttgggacattccaactgcatcaaaactctgcaccttt
acagaacacaccgattatgtacgatgcggttgcaccagcaatttgaatgctgatgtcttt
gtaacaggttcatatgatcacacggtgaaggtatttgatgcccgaatggatcaaagcgtg
atgactatggaccacgggcaaccagtagagagtgtgttgctttttccatcaggtggactt
cttgtatcagcaggtggtcgatttgtaaaagtctgggacatgttaaaaggaggtcagttg
ttggcttcattacgaaaccaccacaagactgtcacgtgcctgtgtttaagcagttcgggg
gagaggctgctctcaggctcccttgataggcatgtcaaaatatacagtacatccacctac
aaagtagtgcacaacattaattatgcagcatccattctgagcttagctttagcacctgaa
aatgaagccattgtggtaggaatggctaacagtgtcctaaatatcagacatcggaaacgg
catgacaagaagaatgaggtcggtgaggttacaaaaaagagaaagagaccatcttacaaa
tatttcattaaaggaaaagactacatgccaaaaaagaatgattttttggtcagtaagcca
gtgcgacaacatctaaagaaatatgacaagctgttgaaaagttttgaagtgtcacgtgca
ctagatgctgtattgcagtcaaatatcagggtgaagaacccagaagttaccattggtgtt
atgcaagaacttaaccgcagagggacacttcaaaatgcacttgcaggacgagatgaaaaa
cagcttgctgttatacttaactttcttaacaggaatgttgttgatccaaggttcacagct
gttttagtaaatgttgcagagattattattggtatttacagttctgtgattggtgagtca
tcagtgatcgacaagcaattcatgaagctgcaagaactgacagaaagggagattgattat
caagaggaactgttgggagtgcttggaatgatggacacactttttgctaccatgacaacc
aaaaaggaagcagttgtacccagaaatctgaattgtgccttaattactggagcagaacaa
gcaaaaccaatggcaattgcctag
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