Leucoraja erinaceus (little skate): 129695335
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Entry
129695335 CDS
T09122
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
leri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129695335 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
129695335 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129695335 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129695335 (gtf2h2)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129695335 (gtf2h2)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129695335 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
Motif
Other DBs
NCBI-GeneID:
129695335
NCBI-ProteinID:
XP_055488162
LinkDB
All DBs
Position
3:complement(15893044..15916114)
Genome browser
AA seq
392 aa
AA seq
DB search
MYEESEKTKRWEGGYERTWEVLKEDESGSLKATVDDLLFKEKRKRVFESHGQVRLGMMRH
LYVIIDMSKSMEDQDLKPNRLTSTLKLLEYFVEEYFDQNPISQIGIISTKNKRAEKLTEL
AGNPKKHKEALSKAVGGSCSGEPSLYNSLSLAMDTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDLIKCLKATKIRVSVIGLSAEVRVCTVLARETGGTHNVILDESHFRDLLNYHVRPPP
ANSNSECSLIRMGFPQHTMGSLSDQDAKPCFSMAHLDSSSGPTLTLGGYYCPQCRAKYAE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFREISLEEVQGERYCQGCEGDLQDPIVYTC
NVCQNIYCVECDIFIHDTLHCCPGCIHNQSNP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagaatcagaaaaaaccaagaggtgggaaggtggctatgaacggacttgggaa
gtcctcaaagaagatgagtcgggttcccttaaagccacggttgatgatcttctattcaaa
gagaaaagaaaaagagtctttgaatcgcatgggcaagttagacttggaatgatgcggcac
ttatatgtgataatagacatgtctaaatcaatggaagaccaagacttgaaaccgaaccga
cttacctcaacattaaagttactagaatactttgtagaagaatactttgaccaaaatccc
attagtcagattggtataatttctacaaaaaacaaaagggcagaaaagcttaccgaactt
gcaggaaatccgaagaaacataaagaagcgttaagtaaagctgttggtggctcatgcagt
ggcgaaccctctctttataactcactctctcttgccatggataccctgaagcacatgcca
gggcataccagtcgtgaagtacttgtcattttcagtagtcttacaacttgtgacccatct
aacatttatgatcttattaagtgtttgaaagctactaaaatccgcgtgtcggtgataggt
ctctcggccgaagttcgagtttgcactgttcttgcacgtgagactggtggtacacacaat
gttattttagacgagagtcattttagagatctgcttaattaccacgttcgacctccacct
gctaactccaattcagagtgttctctcattcgtatgggtttcccccagcatacaatggga
tcgttatccgatcaggatgccaaaccatgtttcagcatggcacacttggatagcagcagt
gggccaacattaacacttggtggatattattgccctcagtgcagagcaaaatatgctgag
ttgcctgtggagtgtaaagtctgtggtcttacattagtctctgcacctcacttggcaagg
tcctaccatcatctatttccactggatgccttcagagaaatttccttagaagaggttcag
ggagaacggtattgtcaaggttgtgaaggggatttgcaagatccaatcgtgtatacctgc
aacgtgtgccagaacatctactgcgtggagtgtgatatttttattcatgacaccttacat
tgttgtcctggatgtattcataaccaatccaatccttaa
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