KEGG   Leucoraja erinaceus (little skate): 129695378
Entry
129695378         CDS       T09122                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:leri04121]
    129695378 (rnf4)
Enzymes [BR:leri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129695378 (rnf4)
Ubiquitin system [BR:leri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129695378 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-RING_4 zf-rbx1 RING_XB3-XBAT31 zf_RING_Vps8 Rtf2 zf-UDP zf-C3HC4_4 zf-RING_11 zf-RING_16 zf-P11 zf-RING_6 zf-ANAPC11 zf-Nse TRAF3_RING Zn_ribbon_6
Other DBs
NCBI-GeneID: 129695378
NCBI-ProteinID: XP_055488243
LinkDB
Position
3:22732964..22771864
AA seq 217 aa
MVKRLRPVWRAPRKRRMIPSQQARRVRRRHRSAEVEEPQADMVESVPAGGEVVDLTCEST
EPVVVDLTNNDSVEIVDEDLSSTINQPSSAEDHPGRTQSDSCILCSDEEDGRADGSSSLS
DQSEAGGPQGQHLHSALCNKDLGSDQVVYGKSSSGTISCPICMDGYTEIVQSGRLIVSTK
CGHVFCSQCIRDSLKNSHMCPTCRKKLNTRQYHPIYI
NT seq 654 nt   +upstreamnt  +downstreamnt
atggtaaaacggctccggccggtttggcgggctcccaggaaacgcaggatgataccttcc
cagcaggcgagaagggtgcggcgacggcacagatctgcagaagtggaggagccacaagca
gacatggttgaaagtgtcccggcaggtggcgaggtggttgacctgacctgtgaatccact
gaacctgtggttgttgacctcaccaacaatgactctgtggagattgtggatgaagatctc
tcctcgacaatcaatcagccgagttcagctgaagaccatcctggcagaacgcagtcagat
agctgcattctttgcagtgatgaagaagatggcagagcagacgggagcagcagcctgtct
gatcaaagcgaagcaggtggacctcagggacaacaccttcactccgccttgtgcaacaaa
gacttgggatctgatcaagttgtttacggcaagtcttcctcaggaaccattagctgtcct
atttgcatggacggttacacagagattgtgcaaagtgggaggctgattgtctccacgaaa
tgtggtcacgtcttctgcagccagtgcatccgggactctctcaaaaactcacacatgtgt
ccgacctgcagaaagaaactcaacacacgccagtaccaccccatctacatctga

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