Leucoraja erinaceus (little skate): 129695386
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Entry
129695386 CDS
T09122
Name
(RefSeq) vimentin-like isoform X1
KO
K07606
vimentin
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129695386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129695386
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129695386
04147 Exosome [BR:
leri04147
]
129695386
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
129695386
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
129695386
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129695386
Exosomal proteins of other cancer cells
129695386
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
Tropomyosin
DUF1664
DUF7491
ABC_tran_CTD
PUMA_CC
CENP-F_leu_zip
ACBP4_C
ATG16
PI3K_P85_iSH2
WDR18_C
RPM2
HAUS1
Laminin_II
DUF6267
HH_AprE
DUF5798
FKBP15
DUF4407
Motif
Other DBs
NCBI-GeneID:
129695386
NCBI-ProteinID:
XP_055488264
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All DBs
Position
3:complement(23268130..23281734)
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AA seq
401 aa
AA seq
DB search
MRSSSYSTKTTSVSRCNKSGPRVQSPSPSRHRSHSSESLAGGRGRSRGPAVERNEKEEMQ
QLNGIFEGYIDKARSLERRKGQLRQEAAALRERLREPGGPEAEYQQQLKELRELVEELAH
RKGLAKIETGNVQEHINCWRLKCQEELDLQGEAERVLREFQKDVTDANLRKAELERKMEE
VAGEMGFLKLLHDEEVTDLTRQIEESKVSAELESARPDLGAALRSIRVEMEEISARNLRD
TEAWYKSKLNSLHQHASRFDGQIQTTKEEINILQRETDELESEINSLRSINQCLEDQLDD
METRHLGKAANLQQAISQLEFHLRETQSQMSRYLQEYQDLLHVKVKLDAEIATYRKLLEA
EEDRLGLIHKSEAGASSVMREKRTESITRNVEKHMTFKVTA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctcttcctacagcacgaagaccacctccgtaagcagatgcaacaagagcggc
ccgagggtccagagcccttccccgtcccgccaccggtcccactccagcgagtccctggca
gggggaaggggccgctccagggggccggcggtggagaggaatgagaaggaagagatgcag
caactgaacggcatcttcgaaggttacatcgacaaggcgaggagcctggagcggcgcaaa
gggcagctacggcaggaggcggcggcgctgagggagcgcctcagagagcccggggggccg
gaggcagagtaccagcagcagctgaaggagctgagggagttggtggaggagctggcacac
cggaaagggctggctaagatcgagaccggcaacgtccaggaacacatcaactgctggagg
ctgaagtgtcaggaggagctggatctacagggtgaagccgagagggtcttgcgggaattc
cagaaggatgttactgatgccaacctgcggaaagcggagctggagaggaagatggaggag
gtggcgggcgagatgggattcctgaagttgctgcatgatgaagaggtgaccgacctgacc
cgtcagatcgaggagtccaaggtgtcggccgaacttgagtcggcccgtccggatctggga
gcggccttgaggtccatccgggtggagatggaagagatttccgccaggaacctgagagat
accgaggcctggtacaagagcaagctgaacagcctccatcagcacgccagcaggttcgac
gggcagatccagaccaccaaggaggagatcaacatcctgcagcgggagacagacgagctg
gagagcgagatcaactccctccgaagcatcaaccaatgcctggaggaccagctggacgac
atggagaccaggcacctggggaaagcagccaaccttcaacaggccatctcccagttggag
ttccatctacgggagacccagtcccagatgtcccggtacctgcaggagtaccaggacctg
ctgcacgttaaggtgaagctggacgctgagattgcgacgtacaggaagctattggaagcc
gaggaggacagactggggctgattcacaagtctgaagcaggcgcatcctctgtaatgcga
gagaagagaacagaatccatcactcgtaatgtggagaagcacatgacgttcaaagtgact
gcctaa
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