Leucoraja erinaceus (little skate): 129695440
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Entry
129695440 CDS
T09122
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04080
Neuroactive ligand-receptor interaction
leri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129695440 (chrna6)
04082 Neuroactive ligand signaling
129695440 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129695440 (chrna6)
Ion channels [BR:
leri04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129695440 (chrna6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Pyr4-TMTC
Motif
Other DBs
NCBI-GeneID:
129695440
NCBI-ProteinID:
XP_055488369
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All DBs
Position
3:complement(31175259..31181415)
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AA seq
484 aa
AA seq
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MTTLRKTHLLMLIILLLLMNDCSGSKAEDRLFRRIFRRYNQYIRPVENVSDPVTVQFEVS
MSQLVKVDEVNQIMETNLWLRHIWNDYKFQWNPVDYDGIKYIRVPSDKIWKPDIVLYNNA
VGDFQVEDKNKALLKYDGTVTWMPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKI
DLAIIGSKVNLKDFWESGEWEIIDAPGYKHELKYNCCEEIYVDITYYFYIRRLPLFYTVN
LIIPCLLISFLTVLVFYLPSDCGEKITLCISVLLSLTVFLLVITETIPSTSLVIPLIGEY
LLFTMIFVTLSIIITVFVLNIHYRTPTTHVMPGWVQKVFLEVLPKVMLMKRPVEENKTES
VGSCQRKAKCTWNECSNHLEYDDFKAAKDQAKSHCQYCKEPMGNVTSNMQRQTHVSVPSF
EIQQAIESIKYIAENTRSQNEAKDVEDDWKYVALVIDRIFLWIFSLVCVLGTAGLFLQPL
MATE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctgaggaagacgcatctattaatgctcataattttgcttttacttatgaac
gattgctctggctccaaagcagaggaccgtcttttccggaggatattccgccgatataat
caatacatcagaccggtagagaatgtgtctgacccggtgacagtgcagttcgaagtctcc
atgtcccagctggtcaaagtggatgaagtcaaccaaataatggagacaaatctatggctg
cgacatatctggaatgattacaaattccaatggaatccagttgactatgatgggatcaag
tacatccgagttccatcagacaagatttggaaaccagacattgttctgtataacaacgca
gttggagatttccaagttgaagataaaaacaaggctcttctcaagtatgacggcactgtt
acctggatgcctcctgctattttcaaaagctcctgtccaatggacatcacctattttcct
tttgactatcagaattgctccatgaaatttggttcatggacctatgataaagctaagatt
gacctcgcaatcatagggtccaaagtaaatctgaaagacttctgggagagtggcgaatgg
gagatcatagatgcccctggatataaacatgaacttaagtataattgttgtgaagagatt
tatgtagacattacttattatttctacattcgtagactacctttgttttacactgtcaac
ctgatcattccctgcctgttaatctctttcctcacggttctagttttttatctaccctct
gactgtggagaaaagatcactctctgtatatctgtccttctctccttgacagtgtttctg
ctggttatcactgaaaccatcccttccacctcactagtgattcctctgattggcgagtac
ctcttattcacaatgatctttgtaactctgtcgatcatcataacagtctttgtcctgaac
atccactaccggacgccaaccacccacgtcatgccagggtgggtgcaaaaggtatttttg
gaagttctacctaaagttatgttgatgaagaggcctgtagaggaaaataaaactgagagt
gtagggagctgccaaaggaaggccaagtgtacctggaacgaatgctccaaccacctggaa
tatgatgactttaaggcagccaaagatcaggcaaaatcccactgccaatattgcaaggaa
cccatgggcaatgtgacctctaacatgcaaaggcagacacatgtctcagttccttctttt
gagattcaacaggcaatagaaagtatcaaatatattgcggaaaacacaaggagtcagaat
gaagccaaagacgtggaagatgattggaaatatgtggctctggtaatcgacaggatattc
ctatggattttctcgttagtttgtgttctgggaactgcagggttgtttctccagccattg
atggctacagaatga
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