Leucoraja erinaceus (little skate): 129695489
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Entry
129695489 CDS
T09122
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129695489 (elp1)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
129695489 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
TPR_GEMI5
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
129695489
NCBI-ProteinID:
XP_055488439
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Position
3:complement(39146209..39210248)
Genome browser
AA seq
1339 aa
AA seq
DB search
MCEAFTAFAMRNLKLLQSLHCNRWQGLGTPQCLTVRTDTGTVLVGSDLGITELDPRTEQV
VKKVSLVEEAFLPDDGTGCIVGIEDLSDQESVCIATASGDVVLYNLSTNQLECVGSVDSG
VTGMSWSPDQELVVLITGQETIIMMTKDFEPVTEVKIHQDEFGEGKFITVGWGKKETQFH
GTEGKAAAVRKLMEIVPAVPWDDHKFRVTWRGDGQLFAVSAICPLTGSRKLRVWNRECVL
QSTSELVNGLEQALCWKPSGSLIASTQRKLNKHNIVFFEQNGLLHGEFPLPFNKDQVKVQ
ELLWNNESTVLAIWLEDLKSADEGNKDGQQNTYVQLWTVGNYHWYLKQSLHFGCERIVAL
MWDPENPYRLHVLCSGWCYLSYNWHWSTDRSEGDDRNDFANVAVINGDKVHVTPFRQTVV
PPPMCAYQLQLPCPVNQIIFSSDPQRSNDLAVLTADDRISIYQAGDDVKQNSTIVADAVG
GSGLTKHMTAPKLVKTFRINFEEEKSDSLKPLKLRFITWVKENRFLGVFQGLTTSQSVVC
QLITTSDENQEGELSIRTPVTVDRQITNLCHNHKTQTVALELSNGQILRYLWDTESTEPC
VQPWRSADGCLVQFSQPCVQIALCAIEGEEMVLGLTERFRFFINVSEIASNVTSFIVYDE
FLLFTTHSHTCRCLNLRTTSLKALLNLSSTDSQPNDETVRRVERGSRIVTVVPQDAKLVL
QMPRGNLEVIHHRALILAQLRKYLDRLKFKEAFECMRKLRINLNLIYDHNPKVFLENVEN
FLKQITSINSINLFLTELKEEDVTKTMYPYGPNSTTSVPETANKVDTICDALRTTMERIN
PHKYGLSILTCHVRKTTPELETALQKVHDLRVNPPSDPEAVSAEDALKYLLFLVDINQLY
DHAVGTYDFDLVMMVAEKSQKDPKEYLPFLNKLKKMETNYQRYTIDKYLKRYKKAVEHLS
KCGCQHFTELLNLVKDQKMYSDALKLFPAKSQEYKDISVAFGEYLIEKQCHEQAGLIFAR
CGDCEKALDAFLLCCSWQQAFCMAAQLHYTEDKMINMARIISGRLKEQRRYSEAALILEQ
YATDYEEAITSLLEGGAWDESLRLIYKYKRTDILETNLKPSILEAHSNQMTFLDSQKTLF
IHHKSRLKIVWEMKAQEGFLDEEMADGPDSDLYSEKSSLWSAGGMSSKYSHSNSRISARS
SKNRRKAERKRYSLKEGSPMEDVALLQALREIICTVDKLTGEVHDLLKVLVLFGFNDLAS
ELQQVLEGTLQLLEKSITDIWLSDAKRSTLCPVLGPDSTANSIAAALQRPISGMTAYQDD
EIFVPPKLNKKVKWKLNIL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagcctttacagcatttgccatgcgtaatctgaaattgctgcaaagcttgcac
tgcaaccgatggcagggcctgggaacacctcagtgtttgactgtccgtacagatacaggc
acagtgttggtgggttcggacttgggaatcacagaacttgatccacgtacagaacaggtg
gtcaaaaaggtatcgttggttgaagaagcatttctccccgatgatggcactggttgtatt
gttggtattgaggacctgtcagatcaagaatcagtctgcattgccactgcatctggagat
gttgtactttataatctaagcacaaatcagctggaatgtgtcggcagtgtcgacagtggt
gtaactgggatgagctggagtccagaccaggaactggttgtactgatcacaggacaggaa
acaattataatgatgaccaaggactttgagccagtcactgaagtaaaaattcaccaggat
gagtttggtgaaggaaaattcattactgttggttgggggaaaaaggagacccagttccat
ggaacggaagggaaagcagcagctgtccgtaagctaatggaaattgtgccggccgttcct
tgggatgatcataaattccgtgtgacctggcgaggtgatgggcaattgtttgcagttagt
gccatttgtcctttgacagggtccagaaagctgagggtatggaatagagaatgtgtgctc
cagtcaaccagtgaacttgttaatggacttgaacaggccctgtgctggaagccatcaggg
agcttgattgcatctacacagagaaagcttaacaaacacaatattgtgttcttcgaacag
aacggtttgctacatggcgaatttccgcttccttttaacaaagaccaagtcaaagtacag
gagctgctctggaataatgaatctactgtgctggcaatttggctagaagatttgaaatca
gcggacgaggggaacaaagatggccagcaaaatacatatgttcagttgtggactgtgggg
aactatcattggtacctgaaacagagtttacattttggttgtgaacgcattgtggcccta
atgtgggatcctgagaacccctatcgactccacgttctctgtagtggatggtgttacctc
tcctataactggcattggtctacagacagaagtgaaggggatgacaggaatgactttgcc
aatgtagctgtgattaatggagataaagtacatgtgacacctttccgccagacagtagtt
cctccaccaatgtgtgcctatcaattgcaattaccctgtccagttaatcagattatattc
tcttcggatccacaaaggagcaatgatttagcagtcttaacagctgatgaccggatctca
atctaccaggctggtgatgatgtgaagcaaaattccaccattgtagctgacgctgtcgga
ggaagtggattgacaaagcacatgacagctcccaaattggtcaaaacattcagaatcaat
tttgaagaagaaaaaagtgactcactgaagcctttgaagctacgttttataacctgggta
aaggaaaatagatttctgggtgtatttcaaggtctgaccacatcccaatctgttgtctgt
cagctgataactacatcggatgagaatcaggagggagaactatcaatcaggactcctgta
actgttgataggcagattaccaacttgtgccacaaccataagacacagactgttgccttg
gaactctctaatggtcaaattctaagatacctgtgggatactgagtccactgagccatgt
gtccaaccatggaggtcagctgatggatgcttagtacaattttctcagccttgtgttcag
atagctttgtgcgctattgaaggagaggaaatggtattgggtctgacagaaagatttcga
ttttttattaatgtgtctgagatagcctccaacgttacttcatttatagtgtatgatgag
ttcctgctattcacaacccattcacacacttgtcgctgtctcaatcttaggactacttca
ttaaaagctttgctgaatctttcaagtaccgactcccagccaaatgatgaaacagtacga
agagtggagagaggatctcgtatagtgactgtggtaccccaggatgccaaactcgttcta
cagatgccacgaggaaatctggaagttattcaccacagagcgttaatacttgcccagctc
agaaaatacctggacaggttaaagttcaaggaggcctttgaatgtatgagaaagctgaga
ataaatctcaatctcatctatgatcacaatccaaaggtctttttagaaaatgtggagaac
ttcctgaaacagatcacttccataaattctatcaacttgtttctgactgaattaaaagaa
gaagatgtcacaaaaacgatgtatccatatggtccaaactcaacaacctctgtacctgaa
acggccaataaagtggacacaatctgtgatgcattgcgaactaccatggagagaataaac
cctcacaagtatggtttatctatactgacttgccatgtacgaaaaactactccagaattg
gaaactgctcttcagaaggtccatgatctcagagtgaatccaccaagtgatcctgaggca
gtcagtgctgaggatgccctgaagtatctcctcttcctagtggacattaaccaactttat
gaccatgcagtgggtacatatgactttgatctagtgatgatggtagcagaaaaatcacaa
aaggatccaaaggaatatttaccatttttgaacaaattaaagaaaatggagactaattac
cagagatacaccatagacaaatatttaaagcgttacaaaaaggctgttgagcaccttagt
aaatgtggttgtcaacatttcactgagctactaaacttggtaaaggaccaaaagatgtac
agtgatgccttgaaattattcccagcaaagagccaagaatacaaggatatcagtgttgca
tttggcgagtacctcattgagaagcaatgccatgaacaagcagggctaatcttcgcacga
tgcggggattgtgaaaaggcactcgatgctttcctgctgtgctgtagttggcagcaagcc
ttttgtatggctgctcagctccactatactgaggacaaaatgattaacatggcacggatt
atatcagggcggttgaaggaacagcggagatattcggaggcagccttaatcctggagcaa
tatgccacggactatgaagaagccattacctcacttttagaaggaggtgcctgggacgag
tcattaagactgatttacaagtacaaaaggactgatattttggaaaccaacctgaaacct
tccatattggaagctcatagcaaccagatgacattcctagattctcagaaaaccttattt
atccatcataaatcccgcctaaaaattgtatgggaaatgaaagcgcaggaaggattttta
gatgaggagatggctgatggcccagactccgatctctattcagagaagagcagcttgtgg
tcagcgggtggaatgagttccaaatattcacacagcaactccaggatatcagcacgtagc
tcaaaaaaccgtcgcaaggcagaaaggaaaaggtacagcttgaaggaggggagcccgatg
gaagatgtagctttgttgcaagcattgagagaaataatctgcactgtggacaaactgaca
ggtgaagttcacgacttattgaaagttttggtcctttttggctttaatgatctagcttca
gagctgcaacaagtattagaaggtaccctacagctattggaaaagtcaatcactgatatc
tggctgtccgatgcgaagagatcaactctctgtccagttcttggaccagattctactgcg
aacagtattgccgccgccctccagcggccaataagtggaatgacagcttaccaagatgat
gaaatctttgttccaccaaaactcaataagaaagtgaagtggaagctgaatattctatga
DBGET
integrated database retrieval system