Leucoraja erinaceus (little skate): 129695611
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Entry
129695611 CDS
T09122
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129695611 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129695611 (zcchc7)
03016 Transfer RNA biogenesis [BR:
leri03016
]
129695611 (zcchc7)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
129695611 (zcchc7)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
129695611 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
129695611
NCBI-ProteinID:
XP_055488691
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All DBs
Position
3:complement(54247343..54445063)
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AA seq
578 aa
AA seq
DB search
MLGYDDLEAYEDELYHEESSSEAEIDSEVEFQLYSQVHYANNINEAKMDGKRDTVAINPH
ITSVEDKAKHSRKSKEQIILTDSDVVVISDSPDVIVLSDSECDDSVYTHKDAKPSECYLK
QNKEQSMGERAPGSDRYSNHSTSSMNRLAEMQTLNERMGRTCQQIQEGTTMEESGSSGTE
SDDAIENWMVLGNDKEEKDDDNIQLNIVDCEAPRNKGGNRHSQWLISEKDRKGSFVGYRY
RYYAPTNKNVDCRNCGKKGHISKTCLAPKKWPPCCLCGVRGHLQRGCPERYCTNCNMPGH
WFKECIERAYWKKKCHRCSMTGHYADACPEIWRQYHLTTKQGPIISGPSEPATRKSVYCY
NCAKRGHYGHECSNKWMHNHILPTSSLVYYYDTERDIKSRERRMWKKVEELQDAGLLETD
FPAKRMCRESANEDLISKKAKKKQRKEMLRKRYERREQGDRNKSSLTKRKTKHHHHSSPS
LKKLNEGAEDDFPRGGTAKSEAANAAHRRKHGSSQLFVHSNPPQTEARLDRKKIKISKQK
RMQAKKKIKARKTKVSDKASPIPNSLLMIKQKKKHKKH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgggttatgatgacttggaggcctatgaagatgagctgtatcacgaggaatcttct
agtgaggcagaaattgatagtgaagtggagttccagttatacagtcaagtacattatgca
aataatattaatgaagcgaagatggatggaaagagggacacagttgctataaatccccat
atcacttcagttgaagataaagcaaagcattcaagaaaaagcaaagagcaaattattttg
actgatagtgatgttgtagtcatttcagatagccctgatgtcatagttttgtcagactct
gaatgcgatgatagtgtttatacacacaaggatgctaaaccctcagaatgttaccttaag
caaaacaaagaacagtccatgggtgaacgtgcacctggatcagaccgctattcaaatcat
tcaacatcaagcatgaatagattggctgaaatgcagacattaaacgaaaggatgggcaga
acatgtcaacagatccaagagggaacaacgatggaagagagtggaagttctggaacagaa
agtgatgatgcgatagagaattggatggttctgggaaatgataaggaagaaaaagatgat
gacaacattcagctcaatattgtagattgtgaagcaccgaggaacaaaggaggtaaccgt
cattctcagtggttaatttctgaaaaagatcgaaagggttcatttgtgggttatcgctat
cgttactatgcaccaactaacaaaaatgtggactgcaggaactgtggcaaaaagggacac
atatccaaaacctgcctggctccaaagaaatggcccccttgctgtttgtgtggagttaga
ggtcaccttcagagaggttgcccagagagatattgcacgaactgcaacatgcctggtcac
tggtttaaggagtgcattgaaagggcatactggaaaaagaagtgtcatcgttgtagcatg
actggtcattatgcagacgcttgtcctgaaatatggaggcagtaccatttaacgaccaaa
caaggaccaataataagtggaccatctgagcctgcaaccaggaaatctgtgtattgctac
aactgtgcaaaaagaggacactatggccacgagtgctcaaacaaatggatgcataatcat
atccttcctacctcgtcacttgtgtactattatgatactgagcgagacataaaaagtagg
gaacggaggatgtggaagaaagttgaagaacttcaagatgctgggcttcttgaaaccgac
tttccagctaagagaatgtgcagggagtctgcaaacgaagatttgatttccaagaaagca
aagaaaaaacagaggaaggagatgcttaggaaaagatatgagagacgagagcaaggagat
agaaacaaaagtagtttgacaaaacgcaaaacaaaacatcaccatcattcttccccttct
ctgaaaaagttaaatgaaggtgccgaagatgattttccaagggggggaacagcaaaatca
gaagctgcgaatgctgctcaccggagaaaacatgggagctcccaattgtttgtgcacagt
aatcctccacagactgaagcacgactagatcgaaaaaagatcaagataagcaaacagaaa
cgtatgcaggcaaaaaaaaagataaaggctaggaaaacaaaagtatctgacaaagcctcc
cccatcccaaatagtcttttaatgataaaacaaaaaaaaaagcacaagaagcactag
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