Leucoraja erinaceus (little skate): 129695620
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Entry
129695620 CDS
T09122
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129695620 (zfr)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129695620 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-C2H2_2
zf-U1
Motif
Other DBs
NCBI-GeneID:
129695620
NCBI-ProteinID:
XP_055488710
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All DBs
Position
1:35260503..35322230
Genome browser
AA seq
1037 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATSNYFGFAHGGAAQYSQQPATGIAYSHPTTAGSYTV
HQAPVAAHAVTAAYAPAAAATAARPIPAVAAAAAATAAYGGYQATHTAADYGYTQRQQEA
PPPPPPVTSQNYQDTYTYVRSTAPAIAYDSKQYYQQPGAAAQPHPTAAEAYYQAAAKAGY
SQAATQYTQAQQTRQVTAIKPATPNPTTTFTVYPVSTTVQPAAAAAATVVPSYTQSGTYS
STAVTYTGATYAGYEAAVYSAASSYYQQQQQQQQQQQQQQKQAAAWAGSTFTKKVPFQNK
QKPKQPPKQPQIHYCDVCKISCAGPQTYREHLEGQKHKKKEAALKTTNQSSNAGTARSIQ
NQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMVSQTATTTTAVK
PPTPNPPMGSSSGMAAATPNISTIVKTNPVAAVSINNVTNKLLAVKKAPTPKITFIGGNK
LQTTGTLIEEAKTPEVKLAAPSVQETKSEAVVEPITALAALQSDVQPVGHDYVEEVRNDE
GKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQEEKM
RKQMQKEEYWRRREEEERWRMEMRRYEEDIYWRRMEEEHHYWDDRRRLVDGYPPGLLGVR
PGMMQPQGPLPPRRPDSSDDRYVMTKHAAIYPTEEELQSVQKIVSHTERALKLVSDCITE
QDKPKNKEDDKKDLIKDRRDDSQRALKGVMRVGVLAKGLLLRGDKNVNLVLLCAEKPTGV
LLNRIADNLPKQLVATTPEKYEVKCCIPDSAIIITSNMEPKMQVTITLTSPVIREENMGI
GDVTSVMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTW
GVLPSWAMELLVEKVISSASGPLSPGDALRRVFECVSSGILLPGGPGLYDPCEKNPNDTL
NSVIEQQREDITASAQFALRLIAFRQIHKVLGMDPLPQMNPRFSVRNRKRRRDNSDGTDG
LEAEGKKDKKDFDSGEF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagttgtttctttcacctatgtgcctggccggctgggcgaagat
gccaaaatggctaccagtaactactttggatttgcccatggtggtgctgcgcagtacagc
caacagccggccactggcatcgcctactcccatccaaccacagctggcagctacacggtc
caccaagcaccagtagctgctcatgctgtgacagcagcctatgctccggcagctgctgct
acggcagccagaccaattcctgctgtggctgcagcagcagctgccacagcagcctatgga
gggtaccaagcaacacacaccgcagcagactatgggtatacacagcggcaacaagaggcc
cctccgcctcctccacccgtcacctcgcaaaattatcaggacacctatacgtatgtgcgc
tctacagcaccagcaatagcctacgacagcaaacaatattatcaacagcctggtgctgca
gctcaaccacacccaactgctgcagaagcctactatcaagctgctgccaaggcaggatat
agtcaagctgcaacgcaatatacacaagctcaacagactagacaagtgacagcaattaag
ccagctactccgaacccaactactacctttactgtttatcctgtatccacaactgtgcaa
ccagcagctgcagcagctgccaccgtggttccgtcctatacgcaaagtggtacctatagc
tcaactgctgtgacgtacactggagctacatatgctggttatgaagctgcagtgtactct
gctgcatcttcctattatcaacagcagcagcagcagcagcagcagcaacaacaacaacag
aaacaagctgcagcttgggctgggagcacttttaccaagaaagtacctttccagaataag
cagaaaccaaagcagccaccaaaacaacctcagattcattactgtgatgtttgcaagatc
agttgtgctggtcctcagacttacagggaacatttggaagggcagaaacacaagaagaag
gaagcagctctaaaaactactaatcaaagcagcaatgctggaacggctcgaagcattcaa
aatcagctgcgatgtgaactctgtgatgtctcgtgcactggcgctgatgcatatgcagct
catattcgtggagcaaagcatcagaaggtggtcaaattgcacacaaagcttggcaaaccc
attccatcaacagaacctagcatggtcagccagacagcaactacaactacagctgtcaag
ccgcccactccaaatccacccatgggatcgagcagtggaatggctgctgcaactcccaat
atttccactattgtaaagactaatccagttgctgctgtgtctatcaataatgtaactaat
aagctgcttgctgtgaagaaagcaccaaccccgaagattacttttataggtggtaacaag
ttgcagactacaggaactttaattgaagaggccaaaacacctgaagtaaaattggcagca
ccatctgttcaggagaccaaatcagaggcagtggtggagccaataacagcacttgctgcg
ttgcagagtgatgttcagcctgttggtcatgattacgtggaagaggttcgaaacgatgaa
ggcaaagtgattcgcttccactgcaaattatgtgagtgtagtttcaatgacccaaacgca
aaggaaatgcatctaaaaggaaggcgacacagactgcagtataagaaaaaagtaaatcca
gaattgcaagttgaagtaaaaccaagtattagagcaaggaaaatccaggaagaaaaaatg
agaaaacagatgcagaaagaagaatactggagacggagagaggaagaagagcgttggcga
atggaaatgagacggtatgaggaggacatttactggaggaggatggaagaagagcaccat
tactgggatgatcgccgcagactggttgatggatatcctccagggctacttggtgttcga
cctggaatgatgcagcctcaagggccactgcctccaaggcgtccagactcgtcagatgat
cgctacgttatgacaaaacatgctgctatctacccaactgaagaggagctgcagtctgtc
cagaaaatagtttcacatactgaacgtgctcttaaacttgtatctgactgcataacagag
caagacaaaccaaagaacaaagaagatgataaaaaggatttaatcaaagatagaagagat
gatagccagagagctttgaagggtgtcatgcgagttggcgtacttgctaaaggattgctg
ttacgtggggacaaaaatgtgaaccttgtactgctttgcgccgagaaaccaactggagta
ctactgaatcgcattgcagacaatttgccaaagcaacttgtggcgactactcctgagaag
tacgaagtaaagtgctgcattcctgactcagccattattattacttcaaatatggaacca
aaaatgcaagtcaccatcacacttacatcaccggtcattagagaggagaacatgggaatt
ggagatgtaacctcggttatggtgaaagacccaccggacgtcttggacaggcaaaaatgc
cttgacgctctggctgctctccgccacgctaagtggttccaggctagagccaatggtttg
caatcttgtgtgatcattattcgcatcttgcgtgatctctgccagcgggtaccaacctgg
ggagttttgccaagctgggccatggaattgcttgtggaaaaagtaatcagcagtgcttct
gggccacttagtccgggtgacgctttgaggagagttttcgaatgtgtttcttctggaata
cttctaccaggtggtcctggcctatatgatccttgtgaaaagaacccgaatgatacattg
aattcagtcattgaacaacagcgagaagatataacagctagtgcacagtttgctctgaga
ttaatagcattccgccagattcacaaagtcttgggaatggatccattacctcagatgaat
ccacgtttcagtgttcgtaatcgaaagaggaggagggacaacagtgatgggacggatgga
ttggaagccgagggaaagaaggataaaaaagattttgatagtggagaattttaa
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integrated database retrieval system
