Leucoraja erinaceus (little skate): 129695658
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Entry
129695658 CDS
T09122
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129695658
Membrane trafficking [BR:
leri04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129695658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
129695658
NCBI-ProteinID:
XP_055488784
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Position
3:complement(62979152..63004855)
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AA seq
740 aa
AA seq
DB search
MRINFVFPDQKTCLGHQISCGPGSLQCIPAAWQCDGERDCKNGADEVDCGKITCDPLEFA
CSSGRCIAKTFACNGMDDCGDGSDEKDCAASTCGIHEFHCNSLECIPLNWVCDNSVDCTD
KSDESPDRCGRTLPPSACPSSEFQCASGECIHRRWHCDGDADCKDGSDETNCPPRTCRPD
HFQCNDGTCVPGIKRCNQFRDCNDGVDEVNCQKVSECMAQTNFKCRSGECINITQVCDTK
QDCKDWSDEIVSECNKNECLKKNGGCSHICQDLVIGYECECPAGYELINKMTCGDINECR
NPGSCSQVCVNTDGSYKCECHSGYLMDPASGACKAIGKEPYLVFTNRHEIRKLGLHHQAY
TQIAVQLRNAVALDAHMSEGRVFWADASQQAIFSMMLNKRKDAAATSIINDLQIPEGIAV
DWIYRLIYWTDRGTKTLSVANFDGTKRKILFDTNLKEPASVVVDPLSGFIYWSDCGTPAK
IEKAGMNGVNRQLLLSVNIERPKGIALDHMKGRLYWIDAKLHTLSSIDLNGQDRRTVLQS
HKFLAHPCAVALFEDHVYWADEKGIYEANKYTGDNVKLLASNVEPGDIVIYHELIQTSGK
NWCEDFGTCEHLCLPAPQINSRSPKYTCVCPTGMVLNDDEQRCHKVNEHATPKGISAMTA
GFSEEFSRLYTMMPTVLSNPRDASLNTSLEKLNEGSTTIWVIITMSLLVTVGVVGYLTWH
KWQKKNMKYTHFENPVFQRN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaattttgtttttccagatcaaaaaacatgtcttggccatcaaatcagctgt
gggcctggatcactgcagtgcattcctgctgcatggcagtgtgatggagagagggactgc
aagaatggtgccgatgaggttgattgtggtaaaattacttgtgatcctttggaatttgct
tgctccagtggaagatgcattgcaaagacatttgcctgcaatggtatggatgactgtggt
gatggaagtgatgaaaaggattgtgctgcttctacctgtggcattcatgagtttcattgc
aacagcttggagtgcatccctttaaactgggtgtgtgataacagtgtggattgtactgat
aaatcagatgaatctcccgaccgttgtggacgcactcttcctccttcggcctgcccttct
agcgagttccagtgtgcttcgggagaatgcattcaccgtcgctggcactgtgatggtgat
gcagactgcaaagacggaagtgatgaaactaattgccctcctcgcacgtgccgacctgat
cacttccagtgtaatgatggaacttgtgtccctgggataaagcgatgtaatcagttccga
gactgtaatgatggtgttgatgaagttaattgccagaaagtttcagaatgcatggcacaa
actaatttcaaatgtcgcagtggagaatgcataaacattacccaagtatgtgatactaag
caggactgcaaagactggagtgatgaaattgttagtgaatgtaacaagaatgaatgttta
aaaaagaatggtggctgttcccacatatgccaggatctcgtcattggctatgaatgtgaa
tgcccagctggttatgaattgatcaacaagatgacctgtggagatattaatgagtgtcgc
aatcctggatcctgcagtcaagtttgtgttaatacagatggaagctacaaatgtgaatgt
cattcgggttatcttatggatccagctagtggagcttgcaaggcaataggaaaagagcct
tatttggttttcacaaatcgccatgaaatcagaaagcttgggttacatcatcaggcgtac
acccagattgcagtgcagctgagaaacgctgtagcactggatgctcatatgtcggagggg
agagtcttctgggctgatgcgagtcagcaggcaatcttcagtatgatgctgaataaaaga
aaggatgcagctgcaacgtccataattaatgacctgcaaatccctgaaggaattgctgtg
gactggatctacagactaatttactggactgatcgtggtactaaaacactctctgtggct
aactttgatggaacaaaaaggaagattctttttgatacaaatctaaaggaaccagcttct
gttgtggttgatccactgtcaggatttatttactggtctgactgtggtactccagcaaag
attgagaaagcgggaatgaatggtgttaaccgccagcttttactttctgtcaacattgag
cggccaaaaggcattgcacttgatcatatgaaagggcgcctgtattggatcgatgcaaag
ttgcacacattatcaagtatagacctcaatggtcaggacagaagaacggttttgcaatca
cataaatttcttgcgcacccttgtgctgtggccctatttgaggatcatgtctattgggct
gatgaaaaaggaatctatgaagccaacaagtatactggagataatgtgaagcttttagcc
tcaaatgttgaacctggagacatcgtaatttatcacgagctaatacagacatctgggaaa
aactggtgtgaagattttggaacatgcgagcacttgtgtctccctgctcctcaaattaac
agtcgatctccgaagtatacttgtgtatgtccaactggaatggtgctgaacgatgatgag
cagcgttgtcataaagtaaatgaacatgcaactccaaaaggaatctctgcaatgactgca
ggtttttcagaagaattttccagattgtataccatgatgccaacagttttgtctaatccc
agagatgcaagtttgaatacttcacttgaaaaattaaatgaaggatctacaactatttgg
gtcatcattaccatgtcacttctggtaactgttggcgttgttggctatcttacatggcac
aaatggcaaaagaagaatatgaaatacacccacttcgagaatccagtctttcaacgtaat
tga
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