KEGG   Leucoraja erinaceus (little skate): 129696090
Entry
129696090         CDS       T09122                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03430  Mismatch repair
leri03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    129696090 (mlh1)
   03460 Fanconi anemia pathway
    129696090 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:leri03400]
    129696090 (mlh1)
DNA repair and recombination proteins [BR:leri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     129696090 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 129696090
NCBI-ProteinID: XP_055489493
LinkDB
Position
4:complement(2439829..2495384)
AA seq 749 aa
MADPGVIRRLEETVVNRIAAGEVIQRPANAIKEMVENSLDAKSTNIQVILKDGGLKLIQI
QDNGTGIRKEDLEILCERFTTSKLQKFEDLAGICTYGFRGEALASISHVAHVTVTTKTAD
GKCALRCNYCDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSDEFSKIVEVVS
RYAIHNSGVSFTVKKQGETAPDVRTLANASTLDNIRTIFGNAVTRELIEVSFEEPKFAFK
MKGYISNANYSVKKCIFLLFINHRLVESSMLRKAIESVYAAYLPKNTHPFLYLSLEILPQ
NVDVNVHPTKHEVHFLHEDGIIESVQQTVESKLLGANSSRTYFTQTLLPRPAITSSDLAK
PLAAAAASSVVEGFGDKPCARQLVRTDAKEQKMDAFLQPVNMSHVLPAIPAAAGEPWSQD
SEMLDASDFEVLSVKDIGSSANTAEQDLQPCHEESSSGPSRKRPRANLLDDIKEEDSGHD
MTAARLPKRRIINLTSLLSLREEISSRNHTGLQDMLQNHVFIGCVNPQWALVQYQTKLYL
INSTKLSQELFYQILTFDFGNFGVLRLSNPAPLYELAMMALDSPESGWTEDDGPKEGLAE
YIVDFLRTKSEMLQDYFSIGIDENRNLTGLPLLLENYIPALEGLPMFILRLATEVNWDEE
KECFDSLSKECSMFYSIRKEYTLYDSPILLQMGQQHEKLGSDKSWKWTAEHVISKAFRTL
LLPPKDFAENGTILQLANLPDLYKVFERC
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggccgatcctggagtcattcgcaggctggaagaaacggtggtgaacaggattgctgca
ggagaggtgatccagcgacccgctaatgccattaaagaaatggtggagaacagtttggat
gccaaatctacaaatattcaagttattttaaaggatggtggactgaaattgattcagatc
caggataatgggaccggtatcaggaaggaagatttggaaatactttgtgaaagatttact
acaagcaagttacagaaatttgaagatcttgccggcatctgcacttacggatttagaggg
gaggctcttgccagcataagccatgtggcacatgtcacggtaacaacaaaaactgctgat
gggaagtgtgcattgagatgtaactactgtgatgggaaattaaaggctccaccaaaacca
tgtgctggaaaccaaggcacacagataacggtggaagacctcttctacaatattgccaca
cgcaggaaggctctcaaaaatcccagtgatgagttttccaaaatcgtggaagttgtgagc
aggtatgcaattcataattcaggagtgagcttcaccgtgaagaagcaaggtgaaactgct
cctgacgtgagaacattggccaacgcctcaacactagacaatattcgaacaatctttgga
aatgcagtgaccagggaattaattgaggtgtcctttgaagaaccaaagtttgctttcaaa
atgaaaggttatatatccaatgcaaattattctgtgaaaaaatgcatctttttgctcttc
ataaatcatcgcctggtggaatcaagtatgttacggaaggcgattgaatctgtttatgcg
gcgtaccttcccaaaaacacacatcccttcctgtatttgagccttgaaatattgccacaa
aacgtagatgtcaacgttcatccaacgaagcatgaagtacattttctgcatgaggatggt
atcatcgagagtgtgcaacaaaccgtggagagtaagctgcttggtgccaactcctccaga
acctacttcacccagaccttactgccaaggccagccataacctccagtgaccttgccaaa
cctttggcggcggcggcggcatcgtctgtggtcgaaggttttggtgacaaaccatgcgct
cgccagttggtgcggactgacgccaaggagcagaagatggatgctttccttcagccagtc
aacatgtcacatgtgctgcctgccattcctgctgctgctggagaaccttggagccaggac
tctgaaatgctggatgcgagtgactttgaagtactatctgtgaaagatattggcagctct
gctaacacagcagagcaagacttgcagccttgtcatgaagaatcctccagtggcccatcc
agaaaacgaccaagagcgaatctgttagatgatataaaagaagaggactctggtcatgat
atgacggctgctcgtctaccaaagagacggattattaacttaaccagtttgctctctctg
cgggaagagatcagcagtcgaaaccacacaggtcttcaagatatgttgcagaatcatgta
tttataggttgtgtgaatcctcaatgggcattggtacagtaccaaactaaactttacctg
atcaacagtactaaactcagtcaggagttgttttaccaaatcttgacctttgactttggc
aattttggagttttgagattatcgaacccagccccactgtatgaactggccatgatggca
ctggacagtccagaaagtggctggacagaggacgatggtcccaaagagggattagcagag
tacattgttgactttctgaggacaaaatctgaaatgctgcaagattatttttccattgga
attgatgagaacagaaatctaactggattgcctctgctcctagaaaattatatcccagcc
cttgagggattgccaatgtttattctgcgactagctacagaggtgaactgggatgaagaa
aaggaatgttttgattcattgagcaaggaatgtagcatgttttactccattcgaaaagaa
tacacattgtacgattcgccaatcttgttgcaaatgggtcagcagcatgaaaagctcgga
agtgacaagtcatggaagtggaccgcagaacatgttatatccaaggcgttcagaactctg
ctccttccaccaaaagactttgcagaaaatggaacgattctgcaacttgccaatctgcca
gatctgtacaaagtttttgagagatgttaa

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