Leucoraja erinaceus (little skate): 129696090
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Entry
129696090 CDS
T09122
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03430
Mismatch repair
leri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129696090 (mlh1)
03460 Fanconi anemia pathway
129696090 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129696090 (mlh1)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129696090 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129696090
NCBI-ProteinID:
XP_055489493
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Position
4:complement(2439829..2495384)
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AA seq
749 aa
AA seq
DB search
MADPGVIRRLEETVVNRIAAGEVIQRPANAIKEMVENSLDAKSTNIQVILKDGGLKLIQI
QDNGTGIRKEDLEILCERFTTSKLQKFEDLAGICTYGFRGEALASISHVAHVTVTTKTAD
GKCALRCNYCDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSDEFSKIVEVVS
RYAIHNSGVSFTVKKQGETAPDVRTLANASTLDNIRTIFGNAVTRELIEVSFEEPKFAFK
MKGYISNANYSVKKCIFLLFINHRLVESSMLRKAIESVYAAYLPKNTHPFLYLSLEILPQ
NVDVNVHPTKHEVHFLHEDGIIESVQQTVESKLLGANSSRTYFTQTLLPRPAITSSDLAK
PLAAAAASSVVEGFGDKPCARQLVRTDAKEQKMDAFLQPVNMSHVLPAIPAAAGEPWSQD
SEMLDASDFEVLSVKDIGSSANTAEQDLQPCHEESSSGPSRKRPRANLLDDIKEEDSGHD
MTAARLPKRRIINLTSLLSLREEISSRNHTGLQDMLQNHVFIGCVNPQWALVQYQTKLYL
INSTKLSQELFYQILTFDFGNFGVLRLSNPAPLYELAMMALDSPESGWTEDDGPKEGLAE
YIVDFLRTKSEMLQDYFSIGIDENRNLTGLPLLLENYIPALEGLPMFILRLATEVNWDEE
KECFDSLSKECSMFYSIRKEYTLYDSPILLQMGQQHEKLGSDKSWKWTAEHVISKAFRTL
LLPPKDFAENGTILQLANLPDLYKVFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctggagtcattcgcaggctggaagaaacggtggtgaacaggattgctgca
ggagaggtgatccagcgacccgctaatgccattaaagaaatggtggagaacagtttggat
gccaaatctacaaatattcaagttattttaaaggatggtggactgaaattgattcagatc
caggataatgggaccggtatcaggaaggaagatttggaaatactttgtgaaagatttact
acaagcaagttacagaaatttgaagatcttgccggcatctgcacttacggatttagaggg
gaggctcttgccagcataagccatgtggcacatgtcacggtaacaacaaaaactgctgat
gggaagtgtgcattgagatgtaactactgtgatgggaaattaaaggctccaccaaaacca
tgtgctggaaaccaaggcacacagataacggtggaagacctcttctacaatattgccaca
cgcaggaaggctctcaaaaatcccagtgatgagttttccaaaatcgtggaagttgtgagc
aggtatgcaattcataattcaggagtgagcttcaccgtgaagaagcaaggtgaaactgct
cctgacgtgagaacattggccaacgcctcaacactagacaatattcgaacaatctttgga
aatgcagtgaccagggaattaattgaggtgtcctttgaagaaccaaagtttgctttcaaa
atgaaaggttatatatccaatgcaaattattctgtgaaaaaatgcatctttttgctcttc
ataaatcatcgcctggtggaatcaagtatgttacggaaggcgattgaatctgtttatgcg
gcgtaccttcccaaaaacacacatcccttcctgtatttgagccttgaaatattgccacaa
aacgtagatgtcaacgttcatccaacgaagcatgaagtacattttctgcatgaggatggt
atcatcgagagtgtgcaacaaaccgtggagagtaagctgcttggtgccaactcctccaga
acctacttcacccagaccttactgccaaggccagccataacctccagtgaccttgccaaa
cctttggcggcggcggcggcatcgtctgtggtcgaaggttttggtgacaaaccatgcgct
cgccagttggtgcggactgacgccaaggagcagaagatggatgctttccttcagccagtc
aacatgtcacatgtgctgcctgccattcctgctgctgctggagaaccttggagccaggac
tctgaaatgctggatgcgagtgactttgaagtactatctgtgaaagatattggcagctct
gctaacacagcagagcaagacttgcagccttgtcatgaagaatcctccagtggcccatcc
agaaaacgaccaagagcgaatctgttagatgatataaaagaagaggactctggtcatgat
atgacggctgctcgtctaccaaagagacggattattaacttaaccagtttgctctctctg
cgggaagagatcagcagtcgaaaccacacaggtcttcaagatatgttgcagaatcatgta
tttataggttgtgtgaatcctcaatgggcattggtacagtaccaaactaaactttacctg
atcaacagtactaaactcagtcaggagttgttttaccaaatcttgacctttgactttggc
aattttggagttttgagattatcgaacccagccccactgtatgaactggccatgatggca
ctggacagtccagaaagtggctggacagaggacgatggtcccaaagagggattagcagag
tacattgttgactttctgaggacaaaatctgaaatgctgcaagattatttttccattgga
attgatgagaacagaaatctaactggattgcctctgctcctagaaaattatatcccagcc
cttgagggattgccaatgtttattctgcgactagctacagaggtgaactgggatgaagaa
aaggaatgttttgattcattgagcaaggaatgtagcatgttttactccattcgaaaagaa
tacacattgtacgattcgccaatcttgttgcaaatgggtcagcagcatgaaaagctcgga
agtgacaagtcatggaagtggaccgcagaacatgttatatccaaggcgttcagaactctg
ctccttccaccaaaagactttgcagaaaatggaacgattctgcaacttgccaatctgcca
gatctgtacaaagtttttgagagatgttaa
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