Leucoraja erinaceus (little skate): 129696118
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Entry
129696118 CDS
T09122
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129696118 (cdh17)
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Major cadherins
129696118 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_CELSR2_9th
RibLong
NAD-bd_HRPKS_sdrA
Motif
Other DBs
NCBI-GeneID:
129696118
NCBI-ProteinID:
XP_055489558
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All DBs
Position
4:5807236..5921172
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AA seq
846 aa
AA seq
DB search
MKNYRHRLFEQLLFLPVALVLLTEINGQFPKGPLKTMDLLVLEETTVPLMIYMFVPSDSA
VNTVYVVDKAQDSIQIENGVLYLNKSLDRETQAVHKVQIEGLNEKQEVVEGPATVTIIVQ
DINDNQPVFAETKYKGIVWQNSRPGKPFMKVEAKDLDDPNTLNGQFQYSIVEQLPNTGVS
FFQIDKETGEISTTQEGYESLDPLKEKLYDVIVAAKDAAKIPLSSSIQVTIGVKENLWKS
PGKIDVVENSTGPFPQTITKVQWNKPGAIYELKPKDKRHYPDFPFVIDASGDINVTKPLD
REEISEYVLLAFALDKKRQRLEDPLEIVVTVKDINDNRPLCQERVTFLEVQENEQRGSVI
GTVIVKDFDEDGRKNSMLKYKIIDQEPKIPEPDMFKIGEFDGHIQRFNGNLEKKNAPDYI
IRVQATDQLGDAAGLSTVCVVNISVIDINDKIPIFEKMEYGPITLRETTQLDHFVMEIQA
TDDDEPLTGSSEILYTIVDGDENGTFKIVTEERTNKGFVRLSRRLDFETHPVYRLNISAT
NPEPLVTGVYYNTSSFTLLFVNVTDDDEPPCFKKPLYHVSTFENASKGDFLLKVEAFDPE
GGNISYHLTHDPRKWFKINAKTGEIFVNGDVDAEKERIYKMVVTAMEKDDPRKKSTVDIS
VNLRDVNDNRPKLAENTSSFFICMPGEEEKEVTIRAVDDDVELGPPFKFSLGQVPGKPLK
IRPINDTHASVTLKFGKHDVETQYKIPVMISDSGTPPLQGKDFMTVQVCKCTDNKVCFIP
VENDSSYSKVGLAVGILLGTAALIALILVVVYLKMKPKKQEKTDPYPLELTNKELTDKEA
EPLTTA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattaccgtcatcgactctttgaacagctgcttttccttcctgttgcactagta
ctactcacggagattaatggacaatttccaaaaggacctttgaagacaatggatctgctt
gttcttgaggaaactactgtcccgttaatgatatatatgtttgtgccaagtgacagtgct
gtaaatacggtttatgtcgtggataaagcccaagacagcatacaaattgagaacggcgta
ttgtatctcaataaatccctggatcgtgaaacacaagcagtccacaaagtacagatagaa
ggcctcaatgagaaacaagaggtggttgaaggacctgccactgtgacaatcatagttcaa
gatataaatgacaaccaacctgtatttgcggagaccaagtataaagggatcgtgtggcag
aattccagacccggcaagccattcatgaaggtagaagccaaggatttggatgaccccaat
actcttaatggtcaattccagtacagcatcgtagagcagctgcccaatactggagttagc
tttttccagatcgataaagaaactggggaaatttccaccactcaagaaggatacgagtca
ctcgatccattaaaggaaaagctgtacgatgtgattgttgctgcaaaggatgctgccaaa
atacctctcagttcaagcatacaggtaacgattggtgtaaaggagaatctgtggaagtca
cctggaaaaatagatgttgtggagaattctactggtccattcccccagacaatcacaaag
gtgcagtggaataaacctggtgcaatatatgagctgaagccaaaggacaagaggcattat
cccgactttccatttgtaattgatgccagcggtgacattaatgtgacaaaaccactggat
agagaagagattagtgaatatgtgctgctggcattcgctctggataagaaaagacaacgg
ctggaggacccattggaaattgtggtcactgttaaggatatcaatgacaatagaccactt
tgtcaagaacgagtgacattccttgaggtgcaagaaaatgaacaaagaggaagcgttatt
ggaactgtaattgtgaaggactttgatgaagatgggagaaagaactccatgctgaagtat
aaaatcattgatcaagagccaaaaattcctgaacctgacatgttcaagattggtgaattt
gatggacatatccaacgtttcaatgggaatctggaaaagaaaaatgcacccgactacatt
ataagagtccaagccacagatcaattgggagatgcggcaggtctaagcaccgtatgcgtc
gtcaatatctccgtcattgacatcaacgacaagatccctatctttgaaaaaatggagtat
ggtcccatcactttacgagaaaccactcaattagaccattttgtaatggaaatccaggct
acagatgacgatgagcctttaacaggaagctcggaaatactgtacacgattgtggatgga
gatgaaaatggaacgttcaaaatagtaaccgaagaacgtacaaataaaggctttgtacga
ttatccaggcgcctggacttcgaaacacatccagtttatagattaaacatcagtgcgaca
aaccctgaaccattggtcactggagtgtactacaacactagctcattcactttactgttt
gttaatgtgaccgatgacgatgaaccgccatgtttcaagaagcctttatatcacgtatcg
acatttgaaaatgcctccaaaggagatttcttgcttaaggtggaggcttttgatcctgaa
ggtggtaacataagttatcatctaacacacgatccacgcaaatggttcaagattaacgcc
aaaactggggagatttttgtaaatggtgatgttgacgcggagaaggaaagaatctacaaa
atggtggtcaccgcaatggagaaagatgacccgaggaaaaagtctacggtggacatctcc
gttaatttacgagatgttaatgacaaccgtcccaaattagcggaaaatacctcgtcattt
ttcatctgcatgccaggcgaagaagaaaaggaagtgactatccgtgccgttgatgacgat
gtagaactaggtcctccattcaagttttctttgggtcaagtacctggtaaaccgctgaaa
attcgtccaataaatgatactcacgcctccgtcaccttgaagtttggcaaacatgatgtt
gaaacgcaatacaagattcctgtgatgatttctgatagtggcacccctcctctacaagga
aaggatttcatgacagttcaagtgtgcaagtgcacagacaacaaagtgtgcttcattccc
gtggaaaatgattcctcttattccaaagttggacttgcagttggaatactccttggaacg
gccgctcttatagctttgatcctcgtggttgtgtatttaaaaatgaaacctaaaaagcag
gaaaaaaccgatccatatccactggagctaactaataaagagctaactgataaggaagct
gagcccttgacgactgcataa
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