Leucoraja erinaceus (little skate): 129696268
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Entry
129696268 CDS
T09122
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129696268 (chd7)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129696268 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
CHDCT2
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
Motif
Other DBs
NCBI-GeneID:
129696268
NCBI-ProteinID:
XP_055489977
LinkDB
All DBs
Position
4:complement(34855897..35085692)
Genome browser
AA seq
2981 aa
AA seq
DB search
MADPGMLSLFGDDGNIFSEGLEGLGECGFSENPVNALGQQLPMDQGFGSMQSPLHHPPPT
QTQTKLTHYDHFGPFEQQKIHLVDQPNRMIGNTPGNGMASPHSQYHNPSVPPVPHSGAQM
GVYPAMQNERCGQQFVDSSSMWGPRAVQVPDQTRPAFQQQQQQQPPPQGHAQHMQQMGNY
LTRSDYSLQQHNQSQQQRVNQFTQAQEALSQGNPFMGTSGPGHLSRMPQQTPNMGPSLRH
TPSQQYHPHPPLPNTLHGDSIAHSPRFSPSPSQQASSRQQNLNFTSRSQAVPSQSVSSSG
QYSQYPYSNINQGLVNSNTGINQNLGLNNNPSVNQAIPRYPNTVGFPAGTSQGLMHQQPI
HPSGPLNQINAQTMHPTQSQGTYASPSPMSPMKAINNPAGTPPPQVRPGSAGMQLEVGSY
PNMPLPQQPHQSPGTMGLGQRSMGPRSMQTPQYMNPSVPRDIGSLPRPVGALGPSGNHAD
QVMQERIMSGQQHPNQPFQPQLPTCPPVKQHPTVHHQTSPSPHQHQPWAQSQHSSPKAAS
QQVSAQQLVSNTLADNQSDMTQISGQNSQLASGEERQKSLDQQRMQEKANRIVAEAIAKA
KARGEQNIPKVIDQLVISGTAVDSSTEEKKKKKKPKEKKDPKDSKEAKEKKTKSTATAKI
KNNKNASNKKNMPESAVGKKKGKRKHESSPENSDMDKTPPPSPQEDDELGVQKRRSSRQV
KRKRYTEDLEFKISDDDDAGKDSPLNTSQSEQDMATGPVTEKIMSMRTVKKTTESGEEVE
VEELFVKYKNYSYLHCQWTTVEQLAKDKRIHQKIKRFKAKQAQMNKFLTEIEDEPFNPDY
VEVDRILDISHSIDKDSGEPVTHYLVKWCSLPYEESTWEQKLETDQGKIEEFQQLQAMTP
RTEHMERPLPEFWTKLEHSRDYKNGNQLREYQLEGVNWLLFNWYNSQNCILADEMGLGKT
IQSITFLYDMYLKGIHGPSLIIAPLSTITNWEREFRNWTAMNVAVYHGSQASRQMIQAYE
MYFRNAEGRIIQGAYKFHAIITTFEMILTDCPELRNIKWRCVIIDEAHRLKNRNCKLLEG
LKLMDLEHKVLLTGTPLQNTVEELFSLLNFLEPTRFPSEFTFLQEFGDLKTEEQVQKLQA
ILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERNFAFLSKGAGQTNVPN
LLNTMMELRKCCNHPYLINGAEEKILEEFKETHNPDIPDFQLQAMIQAAGKLVLIDKLLP
KLKAGGHKVLIFSQMVRCLDILEDYLIQRRHLYERIDGRVRGNLRQAAIDRFSKPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSY
EREMFDKASLKLGLDKAVLQSMSGRENSANGVQQLSKKEIEDLLRKGAYGALMDEEDEGS
KFCEEDIDQILLRRTHTITIESEGKSSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEL
DIDAVNGRNTLVIDTPRVRKQTRHYNAIKEDELMEFSDLESESEEKTGKPRRPQDRSHGY
PRTECFRVEKNLLVYGWGRWSDILSHGRFKRQLTEHDVETICRTILVYCLNHYRGDEKIK
GFIWDLITPTEDGQTRALQNHSGLSAPVPRGRKGKKVKSQSTQPILKNADWLVSCNPDTL
LHDDGYKKHLKHHCNKVLLRVRMLYYLRQEVIGDVADKIFDGADASDVDIWIPEMDHGEL
PTDWWDREADKCLLIGVYKHGYEKYNSIRADPVFCFVERVGMPDAKAMAAEQRGTDVLAD
VSDGVDFDREEEDPEYKPGRIPFKDEMDDFENSPQDDKEECMDTVNTDKQPDQDDESDKL
YWPSTSVLTTRLRRLITAYQRSYKREQMKLEALSRSDRRRRRPRDEVKAREAERNAAISE
KRQRWTRREEADFYRVVSTFGIVFDPVKKQFDWNQFRAFARLDKKSDDSLEKYFNSFVAM
CKKVCHMPPNPDEEADSTIFIEPITEERASRTLYRIELLRKVREQVLLHAQLVERLKLCQ
PSMDLPEWWESGKHDKDLLVGAAKHGVSRTDYHILNDPKLFFLEAHKNFAQSKGASQRTS
TPFQNQPIACASQMSSVGVAPATPVQEEKSSEQADYDNSKTENERKSPVPIAQDEQVAEP
SKEDGETNCAENAQIDSDCRDTFELLSVKVEHDANDTSAMGTKMLADSEEKEFRPKLLFE
KGSEDDDDDEDDDDDIDKSEESSQPEACTISQGKHFDEESNASLSTARDETRDGFFMEDS
EPTVAQLLHERTYCFSFWPKDRVMINRLDNICETVIKGKWPINRRQPFDFHGIINYTPTS
VESPLPRRSFTELSIVGQGSFSACEDVAGSPQVSRDDAMNLSVPRQRRRRRKKIEIEAER
AARRRNLMEMVAQLRESQAASDSGQERAVDLSKASREARSSTSVSNSSANPKYVLPNASV
PVSDAYKAHVEMLQAGLSRTPTGLMINGSLVDGEMPIKRRRGRRKNVEGLDLLFMNNKRT
SLNADDAEVTKAFEESMQTASQLRNIPSPGQLDPEAHIPVVNLEDGTRLVGEAAPKNKDL
VEWLKIHPAYTVDMPSYVPKSGEVLLSPFQKPKQKRHRCRNPNKLDVNTLTGDERVPVVN
KRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWAEVVKQSGFLPESMFDRVLTGPVVRE
EGASRRGRRPKSEIAKAAVAAAASASGINPLLMNSLFAGMDLASLQNLQNLQSLQLAGLM
GFPSGLAAATTGDAKNPASLLPLMLPGMAGLPNMFGLGSLLSNPLTATASTSAASGASET
ESGISSKTENDKENDKENDDKEINNAESAVDSNGASSSSFTAVATAGLSNNPLAFNPFLL
STMAPGLFYPSMFLPPGLGMTLSGYPHTALAGLQSTVSSSDDKEDKTDGKTEDSSFIEGE
ANSGDSDLAGSPSKPSSLGEDELAQATGLDSIEGEDEEDED
NT seq
8946 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctggtatgctgagtttgtttggtgatgatgggaacattttcagtgaaggg
cttgaaggtctgggcgaatgtggtttttcagagaatccagtgaatgcccttgggcaacaa
ctacccatggatcaaggatttggctccatgcagtctcccctccatcaccccccacctact
cagacgcaaactaagctgactcattatgatcattttggtccgtttgaacaacagaaaatt
catctggtagatcagcctaaccgaatgattggtaatactcctgggaatggcatggcatcg
cctcattcacaataccataatccctcagttccaccagtccctcacagtggagctcagatg
ggtgtatacccagctatgcagaatgaaagatgtggacagcagtttgtggacagcagctcc
atgtggggaccacgtgcagtccaggtgccagaccagacccgacctgccttccagcaacag
cagcaacaacagccaccacctcaggggcatgctcagcatatgcaacagatggggaattac
ctgacacgtagtgattactctttgcaacagcacaaccagtctcaacaacagcgggtgaac
caattcactcaggcacaagaggccctcagtcagggaaatcctttcatgggtacttcaggg
ccaggtcacttatcccgcatgccgcagcaaacccccaacatgggcccttctttacgtcac
actccatcacagcaataccatccccacccccctctgcctaatactctccatggagattcc
attgctcacagtcctagattctcccccagtccttctcagcaagccagtagcaggcagcaa
aacttaaattttacttcacgtagccaggcagtaccttcacagtctgtaagtagctcaggg
cagtattcacaatatccttatagtaacattaatcagggattagttaacagtaatacaggg
atcaatcaaaacctaggccttaataataacccatctgtgaatcaggcaataccccgctat
ccaaatacagtgggattcccagctggaactagccaaggattaatgcaccagcagcctata
catccaagtggtccacttaaccaaattaatgcacaaactatgcacccaacgcagtctcag
ggaacatatgcttctccatctcccatgtcacccatgaaagctataaataacccagcaggt
acccctccaccccaggttaggccaggcagtgctggaatgcagcttgaagttggaagctat
ccaaacatgcccctgccgcaacagccacatcaatccccaggtaccatgggacttggacag
aggagcatgggtcccagaagcatgcagacaccacagtacatgaacccttctgtgccaagg
gatattgggagtcttccaagaccagtcggcgcactgggacccagtgggaatcatgcagat
caagtgatgcaagaacgcattatgtctggccaacagcacccaaatcagccttttcagcct
cagttgccaacttgtccacctgtgaaacagcatccaacggtgcatcatcaaacttctcct
tcacctcatcagcatcagccatgggcacagtcacagcattcatcacccaaggccgcttcg
cagcaagtgtctgcccaacagttggtttcaaatactttggctgataatcagtcagacatg
actcagattagtggacaaaactctcaattagcaagtggagaagagcgacagaagtcactg
gatcagcaacggatgcaagagaaagccaatcgtattgtggccgaggccattgccaaggct
aaagctcggggtgagcagaatattcccaaagtgattgaccaactggtaatctctggcacg
gcagtggatagttcaactgaggagaagaagaaaaagaaaaaaccaaaagaaaaaaaagac
cccaaggactccaaagaagcaaaggaaaaaaaaacaaagtcaacagcaactgcgaagatc
aaaaataacaaaaatgcaagcaataagaaaaacatgccggaatcagcagttggaaagaaa
aaaggaaaacggaaacatgaatcgtctcctgaaaattcagatatggacaaaacaccacct
ccatctccacaggaagatgatgaattgggagtacagaagcgccgttccagtcgacaagtg
aaaaggaaacgctatacggaggatttagagtttaaaatatctgatgatgatgatgcagga
aaagattccccattaaacacttcacaatcagagcaggatatggcaactggtccagttact
gagaagatcatgagtatgcgaacagtgaagaaaacgaccgagtctggagaagaagttgaa
gtagaagaactatttgtaaaatacaaaaactattcttaccttcattgtcagtggaccaca
gtggagcaactggcaaaggacaagagaatccatcagaagattaaacgcttcaaagcaaag
caggcacaaatgaataagtttcttacggagattgaagacgagcctttcaatccagattat
gtggaagtagaccggattcttgatatatcgcatagcattgataaagatagtggagaacca
gtcacccattatctggtgaagtggtgttctcttccatacgaagaaagcacctgggaacag
aaactagaaacagaccaaggcaagattgaagaatttcaacagctacaggccatgacacca
agaacagagcatatggaacggccacttccagaattttggaccaagttggagcattctaga
gactataaaaatggcaatcaactcagggaatatcaactggagggcgtaaactggctactc
ttcaattggtacaacagccaaaactgcattttggcagatgagatggggttaggcaagact
atccagtctattacatttctatatgatatgtatttgaagggaattcatggcccctccctg
attattgcacctctttccacaatcaccaattgggagagagagttccgcaattggacagca
atgaatgtggcagtgtaccatggcagccaggctagccgccaaatgattcaggcatatgag
atgtatttccggaatgctgagggccgtataattcagggagcatacaagttccatgccatc
atcacaacatttgaaatgattttaacggattgtccagaactgcgcaatattaaatggcgt
tgtgtgataattgacgaagcccacagattaaagaacagaaactgcaaacttttggaaggg
ctaaagttaatggatctggaacacaaggtactgctaacagggacaccattacagaacact
gtagaagaacttttcagtttgctgaattttttggagcccactcgattcccatcagagttc
accttcctgcaagaatttggtgatctgaaaactgaggagcaggtacaaaaacttcaggct
attctgaaaccaatgatgttaagacgcttgaaggaagatgtggagaaaaatctggctcca
aaggaagaaacgatcattgaagtagaactgacaaacattcaaaagaaatattaccgagct
attttggagagaaactttgccttcctctcaaaaggagctggtcaaaccaatgtgcccaac
cttctgaataccatgatggaactgagaaaatgctgtaatcatccatacctaattaatggt
gctgaagagaagattttggaagagtttaaagaaactcacaatcctgatataccagatttt
cagcttcaagctatgatccaagctgctggtaagctagtgctgattgacaagctgctgcca
aaactgaaggctggtggccacaaggtgcttatattttcccagatggtgcgctgcctggat
attcttgaggactacctcattcagcgaaggcacctgtatgagcgcattgatggtcgagtg
agggggaatcttcggcaggcagcaatcgatcgtttctcaaaacctgactcggatcgtttt
gttttcctgctgtgcactcgtgctggaggtttggggattaatcttactgccgcagacacc
tgcatcatctttgattctgactggaatccacaaaatgatctccaggctcaagctcgttgt
cacagaattggacagagcaaagcagtgaaagtgtatcgattaataacaaggaattcttat
gaaagagaaatgtttgataaagccagtcttaaacttgggttggacaaagctgttctgcaa
tcgatgagtggaagagaaaatagtgccaatggggtgcagcagctatctaaaaaggaaatt
gaggatcttctgaggaaaggagcatatggtgccctgatggatgaagaggatgaagggtcc
aaattctgtgaggaagatattgaccagattcttttaagacgcactcatacaattactata
gagtctgaagggaaaagctctacttttgcaaaggctagctttgtggcttctggaaataga
accgatatttcccttgatgatcccaacttttggcaaaaatgggcaaagaaagctgaattg
gatattgatgcagtaaatggacggaacactttggtgattgatacaccaagagtaagaaaa
caaacaagacactacaatgctatcaaggaagatgaactcatggaattttccgatttggaa
agtgagtctgaagaaaagactgggaagccccgtagaccacaggacagatcccatggttat
ccaaggactgaatgcttcagggtggagaaaaacttattggtatatggttggggccgatgg
agtgacatactatcacatggtcgttttaaacggcagttgacagaacatgatgtggagacc
atctgccgcactatccttgtgtactgcttgaaccattacagaggagatgagaagatcaaa
ggatttatatgggatctgattactcctactgaggatggacagactcgagctctgcaaaac
cactcgggtttgtctgcaccagtgcctagagggaggaaaggaaagaaagttaaaagccag
tctactcagccaatcttgaaaaatgctgattggctcgtaagctgcaacccagataccttg
ctgcatgatgatggttacaagaaacaccttaaacaccactgcaacaaagtcctactgcgg
gtacggatgctgtattatttgaggcaagaagtgataggagatgtagcagacaagatattt
gatggtgcagatgcaagtgatgtagatatctggatcccagaaatggatcatggggaactt
cctacggattggtgggatcgtgaagctgataaatgccttcttatcggtgtctataagcat
ggttatgaaaagtacaattctataagggcagatcctgtattctgtttcgtggagcgagta
ggaatgcctgatgcaaaggccatggctgctgaacagaggggaacagatgtgttggcagat
gttagtgatggtgttgattttgacagagaggaggaagatccagaatataaaccaggcaga
attccattcaaagatgaaatggatgattttgagaattctccacaagatgacaaagaagaa
tgtatggatactgtgaatacagacaaacaacccgatcaagatgatgaatcagataaactt
tattggcctagcacatcagttctcacaacacgtctgcgccggctgatcacagcttatcag
cgcagctacaagagggagcagatgaaattagaagcactgagcagaagtgaccgtcgcagg
cgccggcctagagatgaagtgaaagctcgggaggcagagagaaacgcagccatatctgag
aagcgtcaaaggtggaccaggagggaggaggcagacttctaccgagttgtatcaaccttt
ggtatagtgtttgatcctgtgaagaagcaatttgactggaaccaatttcgtgcctttgct
agactggataaaaagtctgatgatagtttggaaaagtacttcaactcctttgtggctatg
tgtaaaaaagtgtgtcacatgcctcctaatccagatgaagaagcagattctactattttc
attgagcccatcacggaagagcgtgcttctcgaaccttgtaccgaatagaacttctccgg
aaagttcgggagcaagtgttgctccatgcccaactagttgagcgactcaagctttgtcag
ccaagcatggacctgcctgaatggtgggagtctggtaaacatgacaaagatttattggtt
ggtgctgcaaagcatggagttagccggacagactatcatattctaaatgaccctaaacta
tttttcctggaggcccataaaaactttgcacagagcaaaggggccagtcagcggaccagt
acgcctttccaaaaccagcctattgcctgcgcgagccaaatgtcttctgttggtgttgct
ccagccacaccagtccaagaagaaaaatcttcagaacaagctgattatgataacagcaaa
actgaaaatgaacggaaaagtcctgtaccaatagctcaggatgagcaagtagcagagcct
tctaaggaagatggggaaacaaattgtgcagagaacgcacaaattgattctgattgtcgg
gatacctttgagctattgtctgtgaaagttgagcatgatgctaatgatacttcagccatg
ggtaccaaaatgcttgctgattctgaagaaaaggaattcagacctaaattactatttgaa
aaagggtcagaagatgatgatgacgatgaggatgatgacgatgatattgataagtcagaa
gaatcatctcaacctgaagcctgtactatttctcaaggcaaacattttgatgaagaaagc
aatgcttctttgagcacagcccgtgatgaaactcgtgatggcttttttatggaagatagt
gagcccacagtagctcagctacttcatgaaagaacttattgcttctcattctggcccaag
gatcgtgtaatgattaatcgtttggataacatttgtgaaacagtgatcaagggaaagtgg
cccataaacaggcgtcagccatttgatttccatggtattatcaactatacccccacttca
gtggaaagccctctgccaaggaggagttttactgaactctccattgttggccaagggagc
ttcagtgcctgtgaagatgtagcaggttctcctcaggtgtcgagggatgatgcaatgaat
ttatcagttccaagacaacgtaggagacgacgaaagaagattgaaatagaagctgagcga
gctgcaaggcgaagaaacctgatggagatggtagctcagcttcgtgagtcccaggcagcc
tcagatagtggacaggagagagctgtagatttatcaaaagcctccagagaggcgagaagt
tctacctcagtcagtaactcttcagctaatcccaagtatgttttgccgaatgcctctgtg
ccagtatcggatgcctataaagcccatgtggaaatgctgcaagcaggcctttcacgaaca
ccaactggacttatgataaatggttcactagttgatggggaaatgccaataaaaaggaga
agaggaaggaggaaaaatgtggagggacttgatctcttatttatgaacaacaagcggaca
tcattaaatgctgatgatgcagaagtgaccaaagcttttgaggagagcatgcagacagca
tcacaactaagaaacattccatctcctggtcaattggacccagaggcgcacatccctgtt
gttaacttggaagatgggaccaggcttgtaggcgaagctgcccctaaaaataaagatttg
gtggaatggctgaaaattcacccagcttatacagtggatatgcctagttatgtaccaaag
agtggagaagtgctgttgagcccatttcagaagcctaaacagaaaaggcatcgctgcaga
aatcctaacaaactggacgttaacactttgacaggagatgaaagagtacctgtcgttaat
aaaagaaatgggaaaaagatgggtggtgccatggccccaccaatgaaagacttacctaga
tggcttgaagaaaatcctgagtttgctgttgcacccgactgggctgaggtagtcaagcaa
tctggttttttaccagagtctatgtttgaccgtgttctcactggaccagttgttagagag
gagggagcaagtcggagaggaaggcggccgaagagcgagattgccaaagctgcagtggca
gctgctgcttcagcttcaggtataaacccactactgatgaacagtctttttgctggaatg
gatcttgcaagcctccaaaacttacaaaacctgcaaagtcttcagttagctggattgatg
gggttcccgtcaggccttgctgcagctactacaggagatgcaaaaaaccctgcttcttta
ctaccactgatgctcccaggcatggcaggactgcccaatatgtttggactaggaagcttg
ttaagcaaccccttgactgcgaccgctagtacttcagcagcatcgggtgcaagtgaaaca
gaaagtggtatttcatctaagacagaaaatgataaagaaaatgataaagaaaatgatgat
aaggaaataaacaatgcggaatctgctgttgattctaatggtgcaagttcaagctctttc
acagctgttgcaactgctggactatccaacaatcctcttgcattcaacccattcctgctt
tccactatggctcctggattattctacccatctatgtttcttcctcctggcctgggaatg
accttgtctgggtatcctcacactgcactggctggactgcagagcacagtaagctcaagt
gatgacaaggaggataaaactgatggcaaaactgaagacagcagttttattgaaggagaa
gccaactcaggtgacagtgatcttgcgggaagccctagtaaaccatcttctcttggtgaa
gatgaattggcacaagctacagggttggactcaattgagggagaagatgaggaagatgag
gattaa
DBGET
integrated database retrieval system
