KEGG   Leucoraja erinaceus (little skate): 129696366
Entry
129696366         CDS       T09122                                 
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
  KO
K24495  myomesin
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129696366 (myom1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:leri04990]
    129696366 (myom1b)
Domain-containing proteins not elsewhere classified [BR:leri04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   129696366 (myom1b)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_DSCAM-DSCAML_C Ig_2 ig V-set Pur_ac_phosph_N C2-set_2 Tissue_fac Ig_CD22 C2-set_3 Ig_VEGFR-1-like_5th
Other DBs
NCBI-GeneID: 129696366
NCBI-ProteinID: XP_055490178
LinkDB
Position
4:complement(50251390..50364411)
AA seq 1575 aa
MSSVSVPFYQKHHKHYDRDYRSSQLHSTMQDYRLQEKRNITTHSHGSEHVSGFTHTKDEK
RKHSEGYIGAESHFVQKNTTEEHNVERIASHSSRKVAIRESAERISLNKKIHETHEFHKR
LKEDSMLRLPEFIIKPRSHTVWEKQNVKLHCTVSGWPEPRVTWYKNNVPINIYTDPGKYI
IESKYGLHSLEINNCNFDDTAQYRASAMNVKGELSAFASIVVKRFKAELDDFSFHLGRFA
LPSYDFFPGDSHVKFDVHIVEKFSVSFGKEGETMSLGCTVIVHPNLKRFQPEIQWWRDGV
QLHPSKWAQMHFSGECATLTLTHLNKEDEGLYTMRVLTKSGYELHSAYVFVRDSEAEVAG
APTAPLDVFCLDANKDYVIVSWKQPAVDGGSPILGYFVDRCEVGTSHWVQCNDTPVKFAR
LPVTGLVEGRSYIFRVRAVNNVGISRPSRVSDPVAALDPSDRDRLKGVPLAPWTGQIIVT
EEEPAEGIVPGQPTELTVTEATKNYVVLSWKPPGQRGHEGIMYYVEKCVAGTEDWQRVNP
EIPVKSPRFALFDLAEGKSYRFRVRSTNSAGIGEPSEATEFTEVTDKLDVPKAPGHVVPS
RNTDTSMVVSWEESKDTKELVGYYIEGSISGSGKWDPCNNKPVKGKRFICQGLPTGESYK
FRVRAVNAAGLSAFSQESEALEVMAALGGGVPAGVFPEQSGNIDGLTESRARWDGKHEAS
QPARDTLLSCDAVLNRHQLPTGYGSLPHTAPDTSKEVNAKWTSKPNQRSSKVQDMHEEGI
HEMGPKIQDKHEKGLKVPDMHKIGSKVPDENEKGPKVQDVHMENLAAPTPPCSITVLESV
HDSMVLGWKQPRFHGGSDITGYFVDYREIINNKPGKWNEAHIKAISERAYRINDLKENMI
YQFQVRAANMAGVGLPSSPSDKFKCEEWTIAVPGPPHDLMHTEVRKNSVVLTWKAPVYTG
RNEVTGYYADIRETDANEEQWSSINEKATSKRFIKVQGLKEGVSYVFRVRAVNMAGVGKP
SDLTEPITAETSPGTKEMVVDVDDDGVISLIFECTDMAGGSKFIWSKNYEELIDSSRVTV
ETKGGKTRLIFNDPGKDDLGVYSCAVTDTDGVSSSYAIDEAELLRLLELSHEHKFPVVPL
KSELAVELLDKGQVRFWLEAEHLSPNAQCKFVFNDKEIKNDDKYKIKVDHKTGLVEMIME
KLEDIDEGTFTVQLQDGKASNQSTLVLIGDVFKNLQKEAEFQRGEWLRKQGPHFVEYLEW
EVTSECNVLLKCKVANIKKETSIIWYKDDREIMFDEKHDFKDGVCTLLVQQFSKKDAGVY
EIVLKDDRGRDSSVLRLLEKAFSDLITEVCRMAALTATEVKVQSTEHGIRLYSFVSYYLE
DLKIIWHHNDTKLASTDRVKSGVTGEQIWLQINEPTQKDQGKYTLELFDGKEGHKKSVEL
SGTVFDEAFAEFQRLKQAAIAEKNRARVTGGLPDVVTIQERKSLNLTCNVWGDPVPAVSW
LKNEKELIGDDHLILKFESGKFASFTVTDVRTTDSGKYSILVKNKYGTETGDFTVSVFLP
EEEEQVEKEKATKKK
NT seq 4728 nt   +upstreamnt  +downstreamnt
atgtcctccgtatcagtacctttctaccagaagcaccacaagcactatgatcgcgactat
cggagtagccagttgcactccactatgcaagactaccgcctgcaggaaaagcgcaacatt
acaactcactcccacggctccgagcatgtcagcggatttactcatacaaaagatgaaaaa
cgcaagcactcagaaggatacattggtgcggagagtcactttgtccaaaagaataccact
gaggaacacaacgttgagaggattgcatcgcattcatcaagaaaagtagccatccgggag
tctgctgagcgcatttcactgaataaaaagattcacgagactcatgaatttcacaaaaga
ctgaaggaggacagcatgcttcgtttgcctgagtttataatcaagcctcgatcccacact
gtgtgggagaagcagaacgtgaagctgcattgtactgtctcaggatggcctgaacccaga
gtcacatggtataaaaacaatgtgcccatcaatatctacactgaccctgggaaatacatc
attgagagtaaatacggccttcattcgttggaaattaacaattgtaactttgatgacact
gcccaatatcgtgcttcagcaatgaacgtcaagggagaactttcagcttttgcatcaatt
gtggtgaagagattcaaggccgagcttgatgatttctcattccatcttggaagatttgca
cttccttcctatgacttcttccctggggattctcacgtgaagtttgatgtgcacattgtt
gaaaagttcagcgtgtcctttggtaaagaaggagagacaatgagtttgggctgcaccgtc
attgttcaccccaatctaaagcggtttcaaccagagatccaatggtggcgtgatggcgtt
cagttacatccttccaaatgggctcagatgcattttagtggtgaatgcgccacacttacc
cttactcacctaaacaaagaggatgaaggactctacacaatgcgtgtgttgacaaaatct
ggctatgaacttcacagtgcttatgtgtttgtcagagatagtgaagcagaggtggctgga
gccccaactgcccccttagatgtattttgcttagatgccaataaggattatgtaattgtc
agctggaaacagccagcagttgatggcggaagccccatcctcgggtactttgttgacagg
tgtgaagtaggaaccagtcattgggtccaatgtaatgacaccccggtgaagtttgcgcgc
ttacccgtcactggattggtggaaggccgctcttacatcttccgtgtgcgtgctgtcaat
aacgttggaatcagtagaccttcccgtgtctctgatccggtggcagccttggatccttcc
gacagagatagactgaagggagtaccactggccccctggactggtcagattatcgtaaca
gaagaagaaccagcagaaggtattgtgccgggacaacctacagaacttactgtgactgaa
gccaccaagaattatgttgtcctcagctggaaacctcctggtcaacgtggccatgaaggt
atcatgtactatgtggaaaagtgtgtggcaggcaccgaggactggcagagggtcaaccca
gaaatcccggtgaagtctccacgctttgcattgtttgatctggctgagggtaaatcatac
cgtttccgtgtccgctccaccaactctgctggtattggtgagccttctgaagcgacagaa
tttactgaagttacagacaagctcgatgttccaaaagctcctggtcatgttgtgccttca
agaaacacagacacgtccatggtcgtaagttgggaagaatcaaaagacacaaaagagttg
gtgggatactatattgaaggaagcatcagtggatctggaaaatgggacccatgcaataac
aaaccagtgaaaggaaaaaggtttatttgtcaagggctgcccactggggaatcctacaag
ttccgagtcagggctgtcaatgctgctggccttagtgcattctcacaggaatctgaggct
ttggaagtcatggcagctctaggaggaggagtgcctgctggtgtgtttcctgaacaaagt
ggtaacattgacggactaacagaaagccgtgcacgctgggatggcaagcatgaggcatct
cagcccgcacgtgacactttactaagttgtgatgctgtgcttaacagacaccaactgccc
actggctatggtagtttgccacacacagcaccagatacttcaaaggaggtaaatgcaaag
tggacgagcaagcctaatcagagaagctcaaaggtacaagatatgcacgaggagggtata
catgagatgggtccaaagatacaagataaacatgaaaagggccttaaggtaccagatatg
cacaagattggttctaaggtgccagatgaaaatgagaaaggccctaaagtacaagatgtg
cacatggagaacttagctgccccaactccaccttgcagcatcacggtgcttgaaagtgtc
catgactcgatggtgttaggatggaagcaacccagattccatggtggttccgacataact
ggctattttgtggattaccgtgaaattattaacaataagcctggaaagtggaacgaagca
catatcaaggctatcagtgagcgggcatatagaatcaatgacctaaaggagaacatgata
tatcaattccaagtccgtgcagccaacatggcaggagtaggtctaccttcttcaccgagt
gacaagtttaagtgtgaagaatggaccatcgctgttccagggccacctcatgatcttatg
cacactgaggttagaaagaactctgtggtcctcacctggaaagctccagtgtatactgga
cggaacgaggtgacagggtactatgctgatatccgggagactgatgcaaacgaagaacaa
tggtcaagtatcaatgaaaaagcaacatcaaagagattcataaaggtacaaggactaaaa
gaaggtgtgagttatgttttccgtgtgcgggctgtgaacatggcaggggttggaaaacca
tccgatttaacagagccaatcactgcagaaacaagcccaggtaccaaagagatggtcgta
gatgtggatgatgatggagtcatttccctgatctttgagtgcacggatatggctggaggt
tcaaaattcatttggtctaagaattatgaagaactcattgactcatcaagagttaccgtg
gagacgaaaggcggaaagacgagactcattttcaatgatccagggaaggacgatttgggt
gtttattcttgcgcggtcactgatacagatggagtttcttccagctatgccatagatgaa
gcagagctcttgcgtcttcttgaacttagtcacgaacacaaattcccagttgtacctctg
aagtccgagctagctgttgaactcctggacaaaggacaagtgcgattctggttggaggct
gaacatctctctccaaatgcacagtgtaaatttgtatttaatgacaaagagattaaaaat
gatgacaaatataaaataaaggttgatcacaagactggattggtggaaatgattatggag
aaattggaggatatagatgaaggcacgttcactgttcaactccaagatggtaaagcaagt
aaccagtcgactctggttctgattggagatgtgtttaagaatctgcagaaagaggcagaa
ttccagagaggcgagtggctcaggaaacaaggtccacattttgttgagtatcttgaatgg
gaagttacaagcgaatgcaacgtacttttgaaatgcaaggtggctaatattaagaaagag
acatcaatcatctggtataaagatgacagagagataatgtttgatgagaagcatgacttc
aaggatggtgtgtgtactttgttggtgcaacagttttcaaagaaggacgctggtgtttat
gaaattgtactgaaagacgacagaggaagagattcaagtgtacttcgactgcttgagaaa
gctttcagtgacctgataactgaagtttgtcgtatggctgctctgactgcaactgaggtg
aaggtacagagtacagagcacggcatcagactctactcctttgttagttactacctggag
gatttgaagatcatctggcaccacaacgacacaaaacttgcatcgacggatagagtaaag
agtggtgttacaggggaacagatctggctgcagattaatgagcccacacagaaggaccag
ggaaaatatactctggaactcttcgatggaaaggagggtcacaaaaaatctgtcgaattg
agcggaactgtatttgatgaagcgtttgcagaattccagaggctgaaacaggctgcaatt
gctgagaaaaatcgcgctcgggttactggaggtttgcctgatgttgtcacaatccaagaa
agaaagtcacttaaccttacttgtaacgtgtggggagatccagttcctgccgtctcctgg
ttgaagaacgaaaaggaactcatcggagatgatcatctgatacttaagtttgaatctgga
aagtttgcttcgtttaccgtcaccgatgtcaggaccacggactctggcaaatacagcatc
ctcgtgaaaaacaaatacggcaccgagacaggtgactttacagtaagtgttttcttaccc
gaggaagaggagcaagttgaaaaggagaaagcaacaaagaaaaagtga

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