Leucoraja erinaceus (little skate): 129696366
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Entry
129696366 CDS
T09122
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129696366 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129696366 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129696366 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Ig_CD22
C2-set_3
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
129696366
NCBI-ProteinID:
XP_055490178
LinkDB
All DBs
Position
4:complement(50251390..50364411)
Genome browser
AA seq
1575 aa
AA seq
DB search
MSSVSVPFYQKHHKHYDRDYRSSQLHSTMQDYRLQEKRNITTHSHGSEHVSGFTHTKDEK
RKHSEGYIGAESHFVQKNTTEEHNVERIASHSSRKVAIRESAERISLNKKIHETHEFHKR
LKEDSMLRLPEFIIKPRSHTVWEKQNVKLHCTVSGWPEPRVTWYKNNVPINIYTDPGKYI
IESKYGLHSLEINNCNFDDTAQYRASAMNVKGELSAFASIVVKRFKAELDDFSFHLGRFA
LPSYDFFPGDSHVKFDVHIVEKFSVSFGKEGETMSLGCTVIVHPNLKRFQPEIQWWRDGV
QLHPSKWAQMHFSGECATLTLTHLNKEDEGLYTMRVLTKSGYELHSAYVFVRDSEAEVAG
APTAPLDVFCLDANKDYVIVSWKQPAVDGGSPILGYFVDRCEVGTSHWVQCNDTPVKFAR
LPVTGLVEGRSYIFRVRAVNNVGISRPSRVSDPVAALDPSDRDRLKGVPLAPWTGQIIVT
EEEPAEGIVPGQPTELTVTEATKNYVVLSWKPPGQRGHEGIMYYVEKCVAGTEDWQRVNP
EIPVKSPRFALFDLAEGKSYRFRVRSTNSAGIGEPSEATEFTEVTDKLDVPKAPGHVVPS
RNTDTSMVVSWEESKDTKELVGYYIEGSISGSGKWDPCNNKPVKGKRFICQGLPTGESYK
FRVRAVNAAGLSAFSQESEALEVMAALGGGVPAGVFPEQSGNIDGLTESRARWDGKHEAS
QPARDTLLSCDAVLNRHQLPTGYGSLPHTAPDTSKEVNAKWTSKPNQRSSKVQDMHEEGI
HEMGPKIQDKHEKGLKVPDMHKIGSKVPDENEKGPKVQDVHMENLAAPTPPCSITVLESV
HDSMVLGWKQPRFHGGSDITGYFVDYREIINNKPGKWNEAHIKAISERAYRINDLKENMI
YQFQVRAANMAGVGLPSSPSDKFKCEEWTIAVPGPPHDLMHTEVRKNSVVLTWKAPVYTG
RNEVTGYYADIRETDANEEQWSSINEKATSKRFIKVQGLKEGVSYVFRVRAVNMAGVGKP
SDLTEPITAETSPGTKEMVVDVDDDGVISLIFECTDMAGGSKFIWSKNYEELIDSSRVTV
ETKGGKTRLIFNDPGKDDLGVYSCAVTDTDGVSSSYAIDEAELLRLLELSHEHKFPVVPL
KSELAVELLDKGQVRFWLEAEHLSPNAQCKFVFNDKEIKNDDKYKIKVDHKTGLVEMIME
KLEDIDEGTFTVQLQDGKASNQSTLVLIGDVFKNLQKEAEFQRGEWLRKQGPHFVEYLEW
EVTSECNVLLKCKVANIKKETSIIWYKDDREIMFDEKHDFKDGVCTLLVQQFSKKDAGVY
EIVLKDDRGRDSSVLRLLEKAFSDLITEVCRMAALTATEVKVQSTEHGIRLYSFVSYYLE
DLKIIWHHNDTKLASTDRVKSGVTGEQIWLQINEPTQKDQGKYTLELFDGKEGHKKSVEL
SGTVFDEAFAEFQRLKQAAIAEKNRARVTGGLPDVVTIQERKSLNLTCNVWGDPVPAVSW
LKNEKELIGDDHLILKFESGKFASFTVTDVRTTDSGKYSILVKNKYGTETGDFTVSVFLP
EEEEQVEKEKATKKK
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgtatcagtacctttctaccagaagcaccacaagcactatgatcgcgactat
cggagtagccagttgcactccactatgcaagactaccgcctgcaggaaaagcgcaacatt
acaactcactcccacggctccgagcatgtcagcggatttactcatacaaaagatgaaaaa
cgcaagcactcagaaggatacattggtgcggagagtcactttgtccaaaagaataccact
gaggaacacaacgttgagaggattgcatcgcattcatcaagaaaagtagccatccgggag
tctgctgagcgcatttcactgaataaaaagattcacgagactcatgaatttcacaaaaga
ctgaaggaggacagcatgcttcgtttgcctgagtttataatcaagcctcgatcccacact
gtgtgggagaagcagaacgtgaagctgcattgtactgtctcaggatggcctgaacccaga
gtcacatggtataaaaacaatgtgcccatcaatatctacactgaccctgggaaatacatc
attgagagtaaatacggccttcattcgttggaaattaacaattgtaactttgatgacact
gcccaatatcgtgcttcagcaatgaacgtcaagggagaactttcagcttttgcatcaatt
gtggtgaagagattcaaggccgagcttgatgatttctcattccatcttggaagatttgca
cttccttcctatgacttcttccctggggattctcacgtgaagtttgatgtgcacattgtt
gaaaagttcagcgtgtcctttggtaaagaaggagagacaatgagtttgggctgcaccgtc
attgttcaccccaatctaaagcggtttcaaccagagatccaatggtggcgtgatggcgtt
cagttacatccttccaaatgggctcagatgcattttagtggtgaatgcgccacacttacc
cttactcacctaaacaaagaggatgaaggactctacacaatgcgtgtgttgacaaaatct
ggctatgaacttcacagtgcttatgtgtttgtcagagatagtgaagcagaggtggctgga
gccccaactgcccccttagatgtattttgcttagatgccaataaggattatgtaattgtc
agctggaaacagccagcagttgatggcggaagccccatcctcgggtactttgttgacagg
tgtgaagtaggaaccagtcattgggtccaatgtaatgacaccccggtgaagtttgcgcgc
ttacccgtcactggattggtggaaggccgctcttacatcttccgtgtgcgtgctgtcaat
aacgttggaatcagtagaccttcccgtgtctctgatccggtggcagccttggatccttcc
gacagagatagactgaagggagtaccactggccccctggactggtcagattatcgtaaca
gaagaagaaccagcagaaggtattgtgccgggacaacctacagaacttactgtgactgaa
gccaccaagaattatgttgtcctcagctggaaacctcctggtcaacgtggccatgaaggt
atcatgtactatgtggaaaagtgtgtggcaggcaccgaggactggcagagggtcaaccca
gaaatcccggtgaagtctccacgctttgcattgtttgatctggctgagggtaaatcatac
cgtttccgtgtccgctccaccaactctgctggtattggtgagccttctgaagcgacagaa
tttactgaagttacagacaagctcgatgttccaaaagctcctggtcatgttgtgccttca
agaaacacagacacgtccatggtcgtaagttgggaagaatcaaaagacacaaaagagttg
gtgggatactatattgaaggaagcatcagtggatctggaaaatgggacccatgcaataac
aaaccagtgaaaggaaaaaggtttatttgtcaagggctgcccactggggaatcctacaag
ttccgagtcagggctgtcaatgctgctggccttagtgcattctcacaggaatctgaggct
ttggaagtcatggcagctctaggaggaggagtgcctgctggtgtgtttcctgaacaaagt
ggtaacattgacggactaacagaaagccgtgcacgctgggatggcaagcatgaggcatct
cagcccgcacgtgacactttactaagttgtgatgctgtgcttaacagacaccaactgccc
actggctatggtagtttgccacacacagcaccagatacttcaaaggaggtaaatgcaaag
tggacgagcaagcctaatcagagaagctcaaaggtacaagatatgcacgaggagggtata
catgagatgggtccaaagatacaagataaacatgaaaagggccttaaggtaccagatatg
cacaagattggttctaaggtgccagatgaaaatgagaaaggccctaaagtacaagatgtg
cacatggagaacttagctgccccaactccaccttgcagcatcacggtgcttgaaagtgtc
catgactcgatggtgttaggatggaagcaacccagattccatggtggttccgacataact
ggctattttgtggattaccgtgaaattattaacaataagcctggaaagtggaacgaagca
catatcaaggctatcagtgagcgggcatatagaatcaatgacctaaaggagaacatgata
tatcaattccaagtccgtgcagccaacatggcaggagtaggtctaccttcttcaccgagt
gacaagtttaagtgtgaagaatggaccatcgctgttccagggccacctcatgatcttatg
cacactgaggttagaaagaactctgtggtcctcacctggaaagctccagtgtatactgga
cggaacgaggtgacagggtactatgctgatatccgggagactgatgcaaacgaagaacaa
tggtcaagtatcaatgaaaaagcaacatcaaagagattcataaaggtacaaggactaaaa
gaaggtgtgagttatgttttccgtgtgcgggctgtgaacatggcaggggttggaaaacca
tccgatttaacagagccaatcactgcagaaacaagcccaggtaccaaagagatggtcgta
gatgtggatgatgatggagtcatttccctgatctttgagtgcacggatatggctggaggt
tcaaaattcatttggtctaagaattatgaagaactcattgactcatcaagagttaccgtg
gagacgaaaggcggaaagacgagactcattttcaatgatccagggaaggacgatttgggt
gtttattcttgcgcggtcactgatacagatggagtttcttccagctatgccatagatgaa
gcagagctcttgcgtcttcttgaacttagtcacgaacacaaattcccagttgtacctctg
aagtccgagctagctgttgaactcctggacaaaggacaagtgcgattctggttggaggct
gaacatctctctccaaatgcacagtgtaaatttgtatttaatgacaaagagattaaaaat
gatgacaaatataaaataaaggttgatcacaagactggattggtggaaatgattatggag
aaattggaggatatagatgaaggcacgttcactgttcaactccaagatggtaaagcaagt
aaccagtcgactctggttctgattggagatgtgtttaagaatctgcagaaagaggcagaa
ttccagagaggcgagtggctcaggaaacaaggtccacattttgttgagtatcttgaatgg
gaagttacaagcgaatgcaacgtacttttgaaatgcaaggtggctaatattaagaaagag
acatcaatcatctggtataaagatgacagagagataatgtttgatgagaagcatgacttc
aaggatggtgtgtgtactttgttggtgcaacagttttcaaagaaggacgctggtgtttat
gaaattgtactgaaagacgacagaggaagagattcaagtgtacttcgactgcttgagaaa
gctttcagtgacctgataactgaagtttgtcgtatggctgctctgactgcaactgaggtg
aaggtacagagtacagagcacggcatcagactctactcctttgttagttactacctggag
gatttgaagatcatctggcaccacaacgacacaaaacttgcatcgacggatagagtaaag
agtggtgttacaggggaacagatctggctgcagattaatgagcccacacagaaggaccag
ggaaaatatactctggaactcttcgatggaaaggagggtcacaaaaaatctgtcgaattg
agcggaactgtatttgatgaagcgtttgcagaattccagaggctgaaacaggctgcaatt
gctgagaaaaatcgcgctcgggttactggaggtttgcctgatgttgtcacaatccaagaa
agaaagtcacttaaccttacttgtaacgtgtggggagatccagttcctgccgtctcctgg
ttgaagaacgaaaaggaactcatcggagatgatcatctgatacttaagtttgaatctgga
aagtttgcttcgtttaccgtcaccgatgtcaggaccacggactctggcaaatacagcatc
ctcgtgaaaaacaaatacggcaccgagacaggtgactttacagtaagtgttttcttaccc
gaggaagaggagcaagttgaaaaggagaaagcaacaaagaaaaagtga
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integrated database retrieval system