Leucoraja erinacea (little skate): 129696423
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Entry
129696423 CDS
T09122
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129696423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129696423
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129696423
04090 CD molecules [BR:
leri04090
]
129696423
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
129696423
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Major cadherins
129696423
CD molecules [BR:
leri04090
]
Proteins
129696423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Stevor
DUF2304
CD34_antigen
DUF4381
DUF5385
Motif
Other DBs
NCBI-GeneID:
129696423
NCBI-ProteinID:
XP_055490279
LinkDB
All DBs
Position
4:complement(53933803..54041314)
Genome browser
AA seq
911 aa
AA seq
DB search
MVRLEAAAVLLAALLQATVEANGISLCLAGFTDDTYYAVVSRDIYKGQPLLNVVFNDCFG
SISFRYELSDPRFRVQRDGVVFAAESFRLSGKQLKFVITAHNTQSVQQWQAAVKLAGRSD
SSAMQSGPKSWNPSGVSLPWNVPDILFPAVRPASIGQLKRQKRDWVIPPINVPENERSPF
PKDLVMIRSDRDKNRSLRYSVTGPGADQPPNGLFSINPISGQLIVTRPLDREQIPSYHLR
AHAVDLNGNQVENPIDIVINVIDMNDNRPEFLHPTWNGSVPEGSKPGTFVMTVTAIDADD
PNTSNGILRYKILSQTPSSPSSNMFTINNQTGDIFTVAAGLDREKVPQYTLIIQATDMEG
SPMYGLSNTATAIITIHDINDNPPEFTSATFYGEVPENRFDIIVANLTVTDKDQPLTDAW
YAAYRIIGGDAAGHFIIPTNPINNDGLVTVDKPIDYESNRAFVLTVIAENQVSLTKGIQL
PPQSTATVSITVIDVNESPRFVPNPKVVRQQEGLPEGKVVAFFTAEDPDRYMQQTMRYSK
LSDPANWLKIDPLRGQVTTIAELDRESPFVRNNMYNATFLASDNGIPPASGTGTLQIVLL
DDNDNAPQVSPQEVSICERPEPNAINITAIDLDIEPNTGPFVFELPATPEDVRRNWTITR
LNGDYAQLSLKIGMLDDGIYEIPITIIDSGNPPLSATSVLLIKVCPCNENGDCTSAEAIV
AAGLGTGAIIAILLCIIILLILVLLFVIWMKRRDKERQAKQLLIDPEDDVRDNILKYDEE
GGGEEDQDYDLSQLQQPDTMEPDSIKPMGIRRVDERPIHAEPQYPVRSAAPHPGDIGDFI
NEGLKAADNDPTAPPYDSLLVFDYEGSGSMAGSLSSLNSTSSGGDQDYDYLNDWGPRFRK
LADMYGGGSDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcttggaggcggcggcggtgctgttggccgcgttactgcaggcaacagtggaa
gcaaatggaatctcactatgcttggctggatttacagacgatacctactatgcggtcgtg
tcaagggacatttacaaaggccaacctctcctaaatgtggtattcaacgactgttttgga
agcatttcctttcgctacgaattgagcgacccaaggttcagagtccagcgagatggggtt
gtgtttgcggctgaaagctttcgtctctctggaaagcagctgaagtttgtaataacggct
cacaatacccagtcagtgcaacagtggcaagctgctgtcaagttggccggccgatcggat
agcagcgccatgcaaagtggcccaaagagctggaatccaagtggcgtctccctgccgtgg
aatgttccggatatcttgttcccagccgtccgaccagcgagcattggtcagctgaagcgg
cagaagagagattgggtcatcccgccaatcaacgtgcccgagaatgaacgcagtcctttc
ccaaaggatttggtcatgatccgatcggacagggataaaaatcgctcgttgcgctacagt
gtcacgggcccgggagcagaccagccacctaatgggctgttcagcattaaccccatctcc
ggacaactcatcgtgaccagacctctggatcgggaacagataccttcataccacctccga
gcccacgccgtggacttgaatggaaaccaggtggaaaacccaatcgacatcgtcataaat
gtgatcgatatgaacgacaatcgtccagagttcctgcatcccacctggaacggctcagtc
cctgaagggtcaaaaccaggcacgttcgtgatgaccgtgactgctattgatgccgatgac
cccaatacttccaatggcattttgcgatacaagatcctctcccaaactccgagcagtccc
tcctcgaacatgttcaccatcaacaatcagaccggggacatcttcacggtggctgcaggt
ctcgaccgtgagaaagttccacagtacacgttgataatccaagcgacggacatggagggc
agcccgatgtacggactctctaacaccgccacggccatcattaccatccatgatatcaat
gacaacccaccggagttcacctctgcaacgttctacggagaagtaccggagaacaggttt
gatatcatcgtggcaaacctgacggtgacggacaaagaccagcccctgacggatgcgtgg
tacgccgcctaccggatcatcggtggggatgcagcgggtcacttcatcatccccactaat
cccatcaataacgatggcctggtcactgtggacaagccgatagattacgagagtaaccga
gcttttgtactgacggtgatcgctgagaaccaggtgtccctgaccaagggcatccagctc
ccccctcagtccaccgccaccgtctccatcaccgtcatcgacgtgaacgagagcccgcgc
ttcgtgcccaaccccaaggtggtccggcagcaggagggtctgcccgagggcaaggtggtc
gccttcttcaccgctgaggaccccgaccgatacatgcagcagaccatgagatactccaag
ctgtcggatccagccaactggctcaaaatcgaccccctccgtggacaagtcacgacaatc
gccgagctggaccgtgaatcgccgttcgtgaggaacaacatgtacaacgccaccttcctg
gcgtcggacaacggtatccctccagcgagcgggacgggcacgctgcagattgtgctgctg
gatgacaacgacaacgccccccaggtctctccacaggaggtgtccatctgcgagaggccc
gaacccaacgccatcaacatcaccgccatcgacctcgacatcgaacccaacactggcccc
ttcgtcttcgagctgcccgccacgcccgaggacgtgcgacgcaactggaccataacccgt
ctcaacggagattatgcccagctgagcctgaagatcgggatgctggacgatggcatctat
gagattcccatcacgataatagactctgggaaccctcctctctccgccacctctgtgctg
cttatcaaagtctgtccgtgcaacgaaaacggggactgcacttcagcggaggcgattgtc
gctgcgggtctgggtactggagccatcatcgccatcctgctgtgcatcattatcttgctg
atcctggtcttgctctttgtgatttggatgaagcgccgtgacaaggagcgtcaggccaaa
cagctgctcatcgacccagaggacgacgtgcgtgataacatcctcaagtacgacgaggaa
ggcggcggagaagaggaccaggattacgacctgagccaactccagcagcccgacacgatg
gagcccgactccataaagcccatgggcatccgccgtgtggacgagagacccatccacgcc
gagcctcagtaccccgtacgctcggctgccccccatcctggcgacatcggggacttcatc
aacgagggtctgaaggcggctgacaacgaccccaccgcaccgccctacgactcgctgctg
gtgtttgactatgagggcagtggctcgatggcaggctccttgagttccctcaactccacc
agctctggaggagaccaggactacgactacctgaatgactggggcccacggtttaggaag
ctggcagacatgtacggaggaggcagcgatctctaa
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