Leucoraja erinaceus (little skate): 129696430
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Entry
129696430 CDS
T09122
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129696430 (trappc8)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
129696430 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
DUF7974
Motif
Other DBs
NCBI-GeneID:
129696430
NCBI-ProteinID:
XP_055490287
LinkDB
All DBs
Position
4:complement(54820464..54936294)
Genome browser
AA seq
1512 aa
AA seq
DB search
MAQCVQSVQEFIQDTFVPMVAVLCSEAADGSTRKNNLSFAELVRPFCRLTSEVHMRDPNN
QSHVIKNLRISVTSIVTQPPQQTTIRKLLSEVVSASQPAEGLVANVITAGDYDLNISDRS
VKASVPWYNNWKDTLTQLNSSKFHAATTPWFEAYREYFFQSMPPSDHEFLHHYLACMLVV
SSRDSDPMEQFFKLSQEQHRIQHSSDYSYPKWFIPNTLKYYVLLHDVSEGGEERAETVYE
EMKHKYGTQVCYLLKFNSRMPSSGADEQIPDPWSQYLNRNNLQNQEICDGFVPPASKGKE
CVIGVELDGLDNSINAEIPNNCKSHPFQGSAKSRELDGPNQAKPVEAVNAVMKQNSSGAH
GLSLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLVSRKGLSRTLFTATKKWFSGS
KVPEKTINELKNASSLLYPPEAPELQIRKMADLCFLVQHYDLAYNCYHTAKKDFLNDQAM
LYAAGALEMAAASVFLQPGAQRQYPTHYMETAIQTYKDLCKNLVLAERCTLLSAEILKSQ
AKYSEAATLLIRMTSEDSDLRSAILLEQAAHCFINMRSPMVRKFAFHMILAGHRFGKADQ
RKHALRCYSQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVAAFRHILIKDSKQKA
AQQEAFLREYLYVYKSVSQLSPEAPLPQLPLPYIKSSATRVFFGHDRRPSEGEKQAATHV
SLDQEYEREASQQWKELEERVVAIVNKGAIPQNFQHTQYCLNSQTDNLRFPVAVVEEPVT
VEVVFKNPLKVPLLLSDLSLLWKFNFKDFMKGSEEDARESISNEKDSHMKASHDIFTEVI
NEFQISGEETKTVRLKLLPRLTGELHILGIVYNLSTVSSALKQDGLDSSSGTQMAANCLN
VSSPSLAKSGIKPQAAHNLHQPSSIDQLEYYHGLSWTEGKVPHGLSVRGRQDLEIQGPRL
NNTKEEKTSVKYGSDRRLDPIITEAKPLLEVFFINFPTGLLCGELRKTYVEFVNVSQCPL
TGLKVVCKDPDFFSFGSKTSALTPLSPTASENCSAYKTVVTDCAGTSSAITSSVSPADFG
MDSGNPRWVIEVPLPDSVLLPAASVQLPLWLRGPDEEGVHEINFLFYYESTKPHSKSGHR
VLRHTAIICTSRSLSVRATACRSNALEAEAKSNIDNLLLFLDVANINTSEAGVREFHIIQ
VSSCSEHWKLQKCINPTEDKDAKLSSRERAKLCFRATRCQHSEATLCSEGRYIFADIVLG
SEQIISATTPCADFFFQSCCAAQSRKAALQTPMVPSRPKTGHVTKLVQKCNEVDLNIIVL
WKAYVVEDNKQLILEGQLHVALQSIGKEACSLPHVQEAQEMVLLKFIRLEQPQLPARPSL
EQLSHLIKISLHYPEYYDHSFHQKSLCLVPVTLVLFNCCQIEVDIIVDLRHKATSPEMLE
VHGSFTWLGQTTYKIQLKGQEVHTVALKACFVHAGVYNLGTPRVFAKLADQNVQCETSQQ
NSSPALIIINSV
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtgcagagcgtccaggagttcatccaggacaccttcgttcccatggtg
gccgtgctgtgcagcgaggccgccgacggctcgacgcggaaaaacaacctgtcgttcgcc
gagctggttcggcccttctgccgcctcacgtccgaagttcacatgcgggatcccaacaat
cagagccacgttattaaaaacttgcggatcagcgtcaccagcattgtcactcaaccgcca
cagcagacaaccattcgcaagctgttaagtgaggtggtttctgctagccagcctgcagaa
ggattggtcgctaatgtgattacagcaggagattatgatctcaacatcagtgatcgctca
gttaaagctagtgttccatggtacaataattggaaagacactttgacgcagctgaattcg
tccaagttccatgcagctaccactccctggtttgaagcctacagagaatatttcttccag
tccatgcctccatcagaccatgagtttctgcatcactatttggcatgcatgctagtggtg
tcatcaagagactctgacccaatggaacagtttttcaagctatcacaagagcagcatcgt
atccagcacagcagtgattactcgtatccaaagtggtttattccaaacacattgaagtac
tatgttttactgcatgatgtcagtgaagggggagaagaacgagctgaaactgtctatgaa
gaaatgaaacacaaatatgggacgcaggtgtgctatttactcaagtttaactctcgaatg
ccttcaagtggagcagatgaacagatccctgacccttggagtcagtatttgaatcgcaac
aatttgcaaaaccaggaaatctgtgatggttttgttccacctgccagcaagggtaaggaa
tgcgtgattggagtggagctggacggattggacaattcaataaacgctgaaattccaaac
aactgcaaatctcacccgtttcagggaagtgcgaagtcaagggaactcgacggacctaac
caagcaaaacctgtggaagcagtcaacgctgtgatgaaacaaaacagctctggtgctcat
ggactgagtttaactctgactgaccatgatcgaattagacaattcattcaggaattcacc
ttccgaggattactgccacacatcgaaaagactatccggcaactgaatgaccagctggtg
tccagaaaaggcctcagtcgcactttatttactgcaacaaaaaaatggttcagcgggagt
aaagtgccagagaaaactataaatgaattgaaaaatgcttccagtctgttgtatccacca
gaggctccagagttgcaaataaggaaaatggcagatctttgtttcttggttcagcactac
gacctggcttacaactgctaccatacagcaaagaaagattttctcaatgatcaagcaatg
ctttacgcagcaggggctttggaaatggcggcagcctctgtttttcttcagcctggagcg
cagaggcaatatcccacccattacatggaaacggcaattcagacctacaaggacctgtgc
aagaacttggtactcgctgagcgatgcacattattgagtgctgaaatcttgaaaagccaa
gccaaatattcagaagctgcaacacttcttattcggatgaccagtgaggattctgacctc
cgaagtgcgattttactggaacaagctgctcattgtttcatcaacatgcgatcccccatg
gtgcgaaaatttgctttccatatgattctagccgggcatcgatttggtaaagcagatcag
cggaagcacgccttgcggtgctacagtcaagccatgcaggtttacaaagggaaaggctgg
agtctggcagaggatcacatcaacttcaccattggtcgtcaatctttcactctgcggcag
ctggacaatgctgtggcagccttcaggcacatcctgatcaaggacagcaagcagaaggct
gcacagcaggaagcgttccttcgggagtacctgtatgtttataagagcgtcagccaattg
tcaccggaagcaccgctaccccaactacctttgccctatattaagagctcagcgacacgg
gtattttttggtcatgacaggcgcccctcagaaggtgaaaaacaagcagccacgcacgtc
agcttggaccaggaatatgagcgtgaagcatcccagcagtggaaagaacttgaggagcgg
gttgtagctatagtgaacaaaggggcaatcccacagaattttcagcatactcagtactgt
ctcaacagccagacagacaacttgcgcttccctgtggctgtggtggaagaaccagttact
gttgaagtagtgttcaaaaatcctttgaaggtccctctattattgagtgatctatcgtta
ttgtggaaatttaacttcaaagactttatgaaaggatctgaggaagatgcaagagaatcg
atcagcaacgagaaagattcacatatgaaggcgtctcacgacattttcacggaggtaata
aatgaattccaaataagtggtgaagagaccaaaacggtaagattaaaactgcttcctcgt
ctgacaggtgagctgcacattctcggaatcgtttacaatcttagcacagtatcatcagct
cttaaacaagatggacttgactccagctctggaacacagatggcagccaactgcctcaat
gtcagcagtccttccttggcaaaatctgggatcaaaccacaagctgctcataacctccat
caacccagctcaattgatcaactggagtactaccatggactgagctggactgaaggtaaa
gtacctcacggattatcagtaagaggccgtcaagatttggaaatccagggacctaggctc
aataacactaaagaagagaaaacttctgtgaagtacggatcagatcggcggttagatccc
atcatcacagaggcaaagcccttattagaggtatttttcattaactttcccactggattg
ctttgtggggaattgagaaaaacctacgtggagtttgtgaacgtaagccaatgcccgctt
actggattaaaagttgtgtgcaaggacccagatttcttttcctttgggagtaaaacgtcc
gcgttaacgccactaagtccgacggcttcagaaaactgtagcgcctacaagactgtggta
accgactgtgcgggcacctcctctgccatcacttcatccgtttctcctgcagactttggg
atggactctggaaatccacgctgggtgatcgaagtgcctcttcctgactctgtattgtta
cccgcggcatctgtgcaactgcccctgtggttacgtggacccgatgaagaaggagtacat
gaaataaactttttattttattatgagagtacaaaaccacattcaaaatcgggccaccga
gtgctgagacacacagcaataatatgcacgagccgctctctcagtgttagggccacggct
tgcaggagcaacgcccttgaagcagaagcaaagagcaacatcgataatctcctcctcttt
ctggatgtggccaacattaacacaagtgaagcaggcgtgagggaattccacataattcag
gtgtctagttgcagtgagcattggaaactacagaaatgtatcaaccctacggaagataaa
gatgcaaaactcagcagtcgcgagagagcaaaactgtgttttcgggcaacgcgatgtcaa
cattcagaagctaccttgtgttcagaaggaaggtatatatttgcagatatcgttttggga
agtgagcagataatcagtgcaaccactccgtgtgcagacttcttctttcaaagttgctgt
gctgcacagtctcgaaaggctgcattgcagactcccatggtccccagcagacccaaaact
ggccatgttacaaaattagtgcagaagtgcaatgaggtggatctgaacattatagtatta
tggaaggcttacgttgtggaggacaataaacagctcatcttggaaggccaactccatgtt
gctctccagtccattgggaaagaagcctgttctttacctcatgtacaggaagcgcaggaa
atggttctgttgaaattcatccgactagaacagccacagctccctgcaagaccaagcctg
gaacaactttcacatctcattaagattagccttcattacccagagtactatgaccactca
tttcatcaaaaaagtttgtgtttagtccccgtaacccttgttctgttcaactgctgtcag
atcgaagtggacattatcgtggacctgcggcacaaggccacaagcccggagatgctggag
gtccacggttcattcacctggctggggcagaccacctacaagatccagctgaaggggcag
gaggtccatacggtggcgttgaaggcttgctttgtccacgccggtgtctacaacctgggc
acgccgcgggtctttgccaagctggccgaccagaatgtgcagtgtgagaccagccagcag
aactccagcccggccctgatcatcatcaacagcgtctaa
DBGET
integrated database retrieval system
