Leucoraja erinaceus (little skate): 129696463
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Entry
129696463 CDS
T09122
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
KO
K07375
tubulin beta
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04145
Phagosome
leri04517
IgSF CAM signaling
leri04540
Gap junction
leri04814
Motor proteins
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129696463 (tubb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129696463 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
129696463 (tubb5)
09142 Cell motility
04814 Motor proteins
129696463 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129696463 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129696463 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129696463 (tubb5)
04147 Exosome [BR:
leri04147
]
129696463 (tubb5)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
129696463 (tubb5)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
129696463 (tubb5)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129696463 (tubb5)
Exosomal proteins of colorectal cancer cells
129696463 (tubb5)
Exosomal proteins of bladder cancer cells
129696463 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
129696463
NCBI-ProteinID:
XP_055490354
LinkDB
All DBs
Position
4:complement(59497201..59509417)
Genome browser
AA seq
488 aa
AA seq
DB search
MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPAGNYIGDSYLQLQRINVYYNEASCEWVT
GDGRAGSGGEGKGLHFNLRLSTHLLPIPHSLPAAQKYVPRAILLDLEPGTMDSVRSGNLG
QLFKPDNFIFGQTGAGNNWAKGHYTEGAELVDSVMDVVRKECENCDCLQGFQLTHSLGGG
TGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
DNEALYDICFRTLKLTTPTYGDLNHLVSSTMSGVTTSLRFPGQLNADLRKLAVNMVPFPR
LHFFMPGFAPLTARGSQQYRTLSVSELTQQMFDAKNMMAACDPRHGRYLTVATIFRGAMS
MKEIDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPCGLKMSSTFIGNSTAIQELFKRIS
EQFAAMFRRKAFLHWFTGEGMDEMEFSEAESNMNDLISEYQQYQDATTDENEYFEENEEE
QDETQLSN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagatcgtccacatccaggccggacaatgcggcaaccagatcggcagcaagttc
tgggaggtgattagtgacgagcatggcattgaccctgcgggaaactacattggagactcg
tacctacagctgcagaggatcaatgtgtactacaacgaggcgtcgtgtgagtgggtgact
ggggacgggcgggcgggctcgggaggggaggggaaggggctgcatttcaatctacgactc
tccactcatctcttgccaataccccactcactccctgcagcccagaagtacgtgcccaga
gccatcctactggacctggagcccgggacaatggacagtgttcgttcggggaacctggga
caactcttcaaaccggataacttcatatttggacaaacaggtgcggggaacaactgggcc
aagggacactacacggaaggggctgagcttgtggactcggtgatggacgtggtgaggaag
gaatgtgagaactgtgactgtctacaggggtttcagctcacccactccctgggaggaggc
acggggtcgggaatggggactctgctgataagcaagatacgcgaggagtacccagacagg
atcatgaacaccttcagcgtcatgccatcccctaaagtgtcggacacggtggtggagcca
tacaacgccaccttgtccgtccaccagctggtggagaacacggacgagacctactgcatc
gacaacgaggccctctacgacatttgcttccgcaccctgaagctgaccacacccacctac
ggggatttgaaccacctcgtctcgtccaccatgagtggcgtgaccacttccttgaggttc
cccgggcagctcaacgcagacctgaggaagctggcggtcaacatggtgcccttcccgaga
ctgcacttcttcatgcctggcttcgccccgctcacggcccggggcagtcaacagtaccgc
accctctccgtctccgagctcacccagcagatgttcgacgccaagaacatgatggccgcc
tgtgaccctcgccacggccgctacctgaccgtggccaccatcttccgcggggccatgtcc
atgaaggagatcgacgagcagatgctggccatccagagcaagaacagcagctacttcgtg
gagtggatccccaacaacgtgaaggtggccgtctgcgacatcccgccctgcggactcaaa
atgtcctccaccttcatcggcaacagcaccgccatccaggaactgttcaagcggatatcg
gagcagttcgcagccatgttccgcaggaaggccttcctgcactggttcaccggggaaggg
atggatgaaatggaattctccgaggcggagagcaacatgaatgacctgatatccgagtac
cagcagtaccaagacgctacaacggacgagaacgaatactttgaggaaaacgaggaggaa
caagacgagactcaattaagcaactga
DBGET
integrated database retrieval system
