Leucoraja erinaceus (little skate): 129696502
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Entry
129696502 CDS
T09122
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129696502
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129696502
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Fibin
Motif
Other DBs
NCBI-GeneID:
129696502
NCBI-ProteinID:
XP_055490452
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Position
4:complement(64277727..64378360)
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AA seq
1142 aa
AA seq
DB search
MMENILARGQKKTCFYSSIQNMDELTSQKNINIFKLVDSGDITLIEKLMEEDHDCLSRMD
EDKSSPLHHAAGAGHLNILTLIIEHANFEILNVIDSNGNTPLHWAAEKNQTHIVQTLLDK
GANPNILNNIYLSPLHVAMSLNHNGVVKALASHKSTDVNLQGDLKNTPLMLACSRDNSEG
LSILLEHGALLCKQNRLGRFPIHEAAFSGANKTMEILIRKGEELGYSRELHTNFLDERLH
TPLHMALLGGKIETIKTCINNGAKIDLQEQKDKSTPLHFACLQGAFEAVRFMLSQYKGEN
DILHILDGIKQTPIHKAATYDSSELLEYLIEQGSDMNMVDSESRTPLLWATSRGAWNSVK
ILVIKGANVKIKNSMGCNFLHLTVLQPKGLQNLSEEILKSIEVHELLDDKDNNGCTPLHY
VCTLGQTDSVAKMLALKACLYLKTRDKKSSLHFAANYGRLNTCKLLLQDISYTKLLNEGD
GTGMTPLLLAAQHGHTAVVQLLLRKGALFMRDYKSWTALHYAALGGHSQTMEVLLQGNIS
LLDQVDEKGNTALHLAAKRGHNSAVRLLLAQGAAIVLNKNEASFLHEAIYNKRTDTTLVV
VQNERFDESVQAFIHGSAMQCPLLEMIEHLPESFAGLLDICMTESSEDKKSTDFSIEYNF
KYLQCPLTYKKLVKEDKQIVYTPLAALNAMIHFNQVELLNHPVCKEFLKMKWRAYGLQAH
VFNMALFSLLLLPITYIVITSRPFAFINETQNALNATEELVVLEKENQSISFHTICTIIV
FAMCILGICKEAFQIVQQRWQYFHDSSNLLDGTMYVASILFVIPWVFDASHPLQWQCGMI
SAYTSWVNFLLYLQRFDICGIYVVMFAEILKTLLHIMSIFFFLIFAFGLAFYILLYEQRA
FRNPFLSLMRILAMMQGDINYNDNFLVPYYENRMPFPLLTFTMLTSFMLFIPILLMNLLI
GLAVGDIAEVQRTASLKRMAMQIYLHTSLEEKLPYWFLTKVDEIKITVYPNKRKSGMIND
MLLSFTESQNSETHCEMNNQATDLKKLELQMEKQKYRLKDISAGMQKQHELLMLVIRKLG
IPSEGEDHDQDEHSSYVKAKRQQFKKARSKWDLALKSMQCRQKQISPCSFTHSNEPDNNS
TL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatattttagcgagaggacagaaaaagacttgtttttattcatcaatacaa
aatatggatgaattaacttcacagaagaatattaacatatttaagctagttgacagtggt
gatataacactgattgaaaagttaatggaagaagaccatgactgcctgagcagaatggat
gaagataaatcaagcccattgcatcatgctgcaggagcaggtcaccttaatatcttaaca
ttgatcatcgaacatgctaactttgaaattctgaatgtcattgatagcaatggaaacaca
cctttgcactgggctgcagaaaagaatcaaacacacattgtacaaactctacttgacaag
ggtgcgaaccccaacatcctgaacaatatatatttgtctcctcttcatgtggccatgtct
ttaaatcataacggtgtggtgaaggcactagcctcacacaaatctacagatgtgaatctt
caaggcgatcttaaaaatacacctttgatgttagcatgttcccgagataattctgaaggg
ctgtccatattgttggagcatggagcattactatgcaaacagaatagactgggtcgtttt
cctattcatgaagctgcattttcaggagcaaacaagacaatggaaatattaattcggaaa
ggagaggaactgggttactctcgtgaattgcatacaaattttcttgatgaaagactccat
accccacttcatatggctttacttggcggaaaaattgagacaattaaaacctgcattaac
aatggagcaaaaattgatttacaagagcagaaggataaatcaactcctcttcacttcgcc
tgcttgcagggggcttttgaggctgtcaggttcatgctttctcaatacaaaggagagaat
gatatacttcacattctggatggcattaaacaaacaccaatacacaaggctgcaacatat
gattcctcagaactactagaatatttaattgaacagggatcagatatgaatatggttgac
agtgaatcccgcaccccccttctgtgggccacttcacgtggagcctggaattctgtcaaa
atcctagtgataaaaggagctaatgtcaaaataaagaattccatgggctgtaacttcctt
catttgactgtcctgcagccgaaaggactacaaaacctcagtgaagaaattttaaagtcc
attgaagtgcatgaactcctggatgacaaggataataatggctgtaccccattgcactat
gtgtgtacactgggtcaaacggattcggtggctaaaatgttggcactaaaagcctgtctt
tacttgaaaacaagagacaaaaaatcatcactgcattttgcagcaaattatggtcggctc
aacacatgcaaactgctgctgcaggatataagttacacaaaactactgaatgaaggggat
gggacaggaatgactccactgctgctggctgcacagcatggccacaccgctgtggtgcag
ctactcctcaggaaaggagctctcttcatgcgtgactacaagagttggacagcgttgcat
tatgctgcccttggaggccactctcagacaatggaagtattactacaaggtaatatatct
ctgcttgatcaagtggacgaaaaagggaatactgctctccacctggctgcaaaaagagga
cataatagtgcagtacgcctattgctggcccagggagctgcgatcgtactgaacaagaat
gaagcttcctttctacacgaggcaatttacaataaaagaacggataccactttagttgtt
gttcaaaacgaaagatttgatgaatctgtacaagcctttatacatggctctgcaatgcag
tgcccattattggaaatgattgaacacctgccagaatcctttgctggtcttttggacata
tgtatgacagaatcctcagaagacaagaaaagtactgacttctcgattgaatataacttc
aaatatctacaatgtccacttacgtataagaaacttgtaaaagaggacaagcaaattgtg
tatacaccacttgcagctttaaatgccatgatacacttcaatcaagttgaacttttgaat
catcccgtttgcaaagagtttctgaaaatgaaatggcgagcctacggactacaagcacat
gtttttaacatggctctcttttcattactactgctaccaataacatacattgttattact
tcacgaccctttgctttcatcaatgaaacacagaatgccctcaatgctacggaggaactg
gtggtgcttgagaaagaaaatcagagcatttcattccacacaatatgcacaataattgta
tttgccatgtgcatcctaggcatatgcaaagaggctttccaaattgtacaacagcgatgg
caatacttccatgattcatctaatcttctagatgggacgatgtatgtggcatccattctg
tttgtaattccctgggttttcgatgcctctcacccgctgcaatggcagtgtggtatgatc
tctgcatatacgtcgtgggtgaacttcctactttatcttcaaagattcgatatttgtggg
atctatgtggtgatgtttgcagagattctgaaaaccttgcttcatattatgagcatattt
ttctttctcatctttgcttttggattggcattctacattcttttatatgagcagagagca
ttcagaaatccatttctttctttgatgaggatacttgcaatgatgcagggggatattaac
tacaatgataactttcttgtcccgtattatgaaaataggatgccattcccgcttctgaca
tttaccatgctgacctctttcatgctgttcataccaatcctcctcatgaatttactgatt
ggtttggcagtgggagatattgccgaggtccagagaactgcatccttaaagagaatggca
atgcagatttatcttcataccagtctagaggagaagctcccctattggttccttactaaa
gttgatgaaataaaaataacagtatatccgaacaagcgaaaatctggtatgataaatgat
atgctcctcagttttacagaatcgcaaaactctgaaacgcactgtgaaatgaacaatcag
gcaactgatctgaagaagcttgaattacaaatggagaaacagaagtataggttgaaggac
atttctgcaggaatgcagaaacagcatgagctgctgatgctcgtcattcggaaactggga
atcccttctgagggagaagaccatgaccaagatgaacattctagctatgtcaaagccaaa
aggcagcaattcaagaaagctagaagcaagtgggatcttgcattgaagagcatgcaatgt
agacagaagcaaatatcaccttgttcattcactcactctaatgaacctgacaacaacagc
actttgtag
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