Leucoraja erinaceus (little skate): 129696575
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Entry
129696575 CDS
T09122
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129696575 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129696575 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129696575 (taf2)
03036 Chromosome and associated proteins [BR:
leri03036
]
129696575 (taf2)
Peptidases and inhibitors [BR:
leri01002
]
Metallo peptidases
Family M1
129696575 (taf2)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129696575 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
129696575 (taf2)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129696575 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
129696575
NCBI-ProteinID:
XP_055490587
LinkDB
All DBs
Position
4:complement(79554151..79656370)
Genome browser
AA seq
1198 aa
AA seq
DB search
MLYTELSFTFDLYLYTTHQVVCINNINFQRKSVIGYVELTIFPLVANLSRIKLNSKQCRI
YRVRINDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDTGNGELCIKVPS
ELWKHADEMKVMKVYIEFSLDQPKGGLHFVVPNVEGSMAERGAHVFSFGYENSTRFWFPC
VDSFSELCTWKLEFTVDAAMVAVSNGDLVESVYTHDMRKKTFHYMLTIPTAAPNISLTVG
PFEILVDPYMHEVTHFCLPQLLPLLKHTTSFLHEIFEFYEEILTCRYPYAYYKTVFVDEA
YVEVASYASMSILSTNILHSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWSDEWVLKG
ISGYIYGLWMKKTFGVNEYRHWIKEELDKIVDYELKTGGVLLHPTFTGVKEKETPAPHLH
FSIRHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHM
WSQMLLSTTGFLKSISNVSGKDIQPLIKQWVDQSSVVKFFGSFAFNRKRNILELELKQDY
TSLGTQKYVGPLKITVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLLNGEEV
DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESIHALEKF
PTPASRLALTDILEQEQCFYKVRMHACFRLAKIANAMVNTWTGPPAMKSLYTRMFCCKSC
SNIVKTNNFMNFQSYFLQKTMPVAMALQRDIHNQCPKEVLAFILDLIKYNDNRKNKFSDN
YYRAELIDALSNSVTPAISINNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRNTITV
SCLKAIRILQKNGHIPSDPSLFKSYADYGHFVDVRIAALEAVVDYTQVDRSTDELQWLLD
LVQNDGVPYIRHKILNMLNKNPPFTKNADSSMCIEALVDQLWKLMNSGTSHDWRLRCDAV
DVYHTLFGLSRPSCLPLPELGLVLNLKEKKTVLNPIIIPEIGISGQEPLGSANVHGIIPA
FQIKEEEHLVKDAVSAAFGIQGVKRKAETPLGSPLEPGQVLEKDEDNSKVKLKIKFSNSQ
EDEEIDMDSVHDSQAFIYHQLNILERPSTPGKETPAIETGMISMPATPVPSLGKESSSAK
HGEHHHHHHHEHKKKKKKHKHKHKHKHKHDGKDKEKDMFTFVNSPASGRSLNSPSFSD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatactgaactgtcatttacttttgatttgtatctttatacaactcaccaggtg
gtctgcataaataatataaactttcagaggaagtctgtcataggatatgtggagttgacc
attttcccattagttgcaaacctcagtagaattaaactgaatagcaagcaatgtcggatt
tacagagtaagaataaatgatttggaagctgctttcatttacaatgatccaactttggag
gtctgccaccacgaatcaaagcagcgaaatcttaattacttttccaatgcctatgcagca
gcagtcagtgcggttgaccctgacactggaaatggagagctgtgtattaaggttccatct
gaactgtggaaacatgctgatgagatgaaagttatgaaagtatatattgaattctccttg
gaccagccaaaaggagggcttcattttgttgtgcccaatgtagaaggtagcatggctgag
cgaggtgcacatgtcttttcctttggatatgaaaactctaccaggttttggtttccttgt
gtggactctttctctgaactatgcacatggaagttggagttcacagttgatgctgctatg
gtagcggtttccaatggagatttggtggagtctgtttacacccatgacatgagaaaaaaa
acttttcattacatgttaacgattccaacagctgccccgaacatttcactgactgttggc
ccctttgaaatactggttgatccttacatgcatgaagtaacacatttctgcctaccccaa
ttgttgccactcctgaaacacaccacgtcctttcttcatgagatttttgagttttatgaa
gagattctgacctgcagatatccctatgcctattataagactgtatttgttgatgaagcc
tatgtagaagtagcttcatatgcatcgatgagtattttaagcacaaacatcctgcacagt
gccatgattatagatcagacgccacttaccagacggtgtttagcacaagctctcgctcag
cagttttttggctgcttcatttccagaatgtcttggtcagatgaatgggtgttgaaagga
atctctgggtatatatatggcctttggatgaagaaaacatttggtgtaaatgaatacaga
cactggataaaagaggaactggacaaaattgtggactatgaattgaaaactggtggtgtt
ttgctgcatccaacatttactggagtgaaagagaaagaaaccccagcaccccacttgcac
ttttcaattcgacatccacatacattgtcctggaagtattacaagatgtttcagtgcaaa
gcccaccttgtaatgagactcattgaaaataggatcagcatggaattcatgctacaggtc
ttcaacaaactgttaagtttggccagtaccgcctcttcacagaagttccaatcacatatg
tggagccagatgctgctttcaacaactggattcttaaaatcaatttcaaatgtgtctgga
aaagatattcaacctctaataaagcaatgggttgaccagagcagtgtggtgaagtttttc
ggcagctttgcgtttaacaggaaaaggaacatcttggaactggaactgaagcaagattac
acttctttgggaactcaaaaatatgtgggacctttaaaaattaccgtacaagaattagat
gggtcatttaaccacactctgcaaattgaagagaacagcctcaagcatgatattccttgc
cattctaagagcagacgaaataagaaaaaaaagatcccactgttgaatggggaggaagtg
gacatggatctttctgcaatggatgctgattctccattactgtggataaggattgaccca
gatatgtctgttttgagaaaggtggaatttgagcaggctgatttcatgtggcaataccag
cttcgttacgaaagagatgtggttgcgcaagaagaatcaattcatgctctagaaaagttt
cccacaccagcatctcgactagcactaacagatatcctggaacaagaacagtgcttttat
aaagtacgaatgcatgcctgcttcaggctagcaaagattgcaaatgccatggtgaacact
tggacaggtcctccagccatgaagtcgctctatacccgcatgttttgctgcaaaagttgt
tcaaatattgttaagaccaacaatttcatgaacttccagagctactttttacagaagacc
atgcctgttgctatggcattgcagcgggatatccataaccagtgtcccaaagaagtgttg
gcctttattttggacttaattaaatataacgacaacagaaagaacaagttttcggacaac
tactatcgtgctgaacttattgatgcactttcaaactcagtgacgcctgcaattagcatc
aataatgaagttcgaacattggataatctcaatcctgatgtacgattgattttggaggag
attaccagatttttaaatatggagaagttgctaccaagttatagaaacacaataactgtc
agttgcctgaaagctatacgtatacttcagaagaatggccatattcccagtgatccatca
ctttttaaatcatatgcagattatgggcactttgttgatgttcgcattgcagctctggaa
gcagttgtggattatacgcaagtggacaggagcacagatgaattgcagtggctgttagat
ctggtccagaatgatggtgtaccctacataagacataaaattttgaatatgctcaataaa
aatccccctttcaccaagaatgcagactcatccatgtgcatcgaggcattggtggaccag
ctctggaaactaatgaactcaggaacctcccacgactggagacttcgctgtgatgccgtg
gacgtgtaccatactttgtttggcctcagccgaccttcttgccttcctctgcctgagttg
ggtctagttctcaacttaaaggaaaagaaaactgtactgaatcctataatcattcctgag
ataggaataagtggacaagagcccttgggcagtgcaaacgtgcatggaataatacctgcc
ttccagattaaagaagaggagcaccttgtcaaggacgctgtatccgctgcatttgggatt
cagggtgttaagagaaaagcagagactccacttggttccccactggaacctggccaagtt
ctggaaaaagatgaagataacagcaaagttaagcttaaaatcaaattttctaattctcaa
gaggatgaagagattgacatggactcagttcatgatagtcaggcttttatttatcatcaa
ttgaacatacttgaacgaccgtctactccaggaaaagaaactccagctatagaaactggc
atgatttccatgccagccactccggttccttcacttggcaaagaatccagttcggcgaaa
catggggaacaccatcatcatcatcatcatgaacacaagaaaaagaagaaaaagcataaa
cacaagcataagcacaagcacaaacatgatgggaaagataaagaaaaagacatgtttact
tttgtaaacagcccagctagtggacggtcgcttaactctccttcattttcagactaa
DBGET
integrated database retrieval system
