Leucoraja erinaceus (little skate): 129696699
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Entry
129696699 CDS
T09122
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03420
Nucleotide excision repair
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129696699 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
129696699 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129696699 (ercc8)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129696699 (ercc8)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129696699 (ercc8)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
129696699 (ercc8)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_SCAP
Nucleoporin_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
129696699
NCBI-ProteinID:
XP_055490800
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All DBs
Position
1:complement(52959383..53010953)
Genome browser
AA seq
400 aa
AA seq
DB search
MLALLAARRSGCDDPLRVKRAESTRRVLNLELNNDRDVQRIHGSGINSLDIDPVEQKYML
SGGSDGVIAIYDLENATKKLQYTCKAICTVGRSHGHVHKFSVETVQWYPCDTGMFTSSSF
DKTLKIWDTNRLLPAEVFTFEGTVYCHHMSPIATKHCLIAVGTKNPKVQLCDLKSGSCTH
ILQGHRGEVLSVKWSPRHEHILVTASADSKVRLWDIRNASGSLIVLDQHNGEIAKSSSES
ANTAHNGRANGLCFTSDGLHLLTIGTDDRMRLWNSSTGENTLVNYGRVCNGSRKNLKLAV
SHGCRPDFAFVPVDSCIAVYDIYAGQLLTELRGHYNYVNCCTFQSYFQELYSGGSDVNIL
AWIPDLGRIGVENDEPKECEARTSQTGIFQDEWSSSDNEN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccttttggcagctcggcggagcggctgcgatgatccgctgagagtgaagcga
gccgagtccacacggagagtgttaaatctggaattaaacaacgacagggatgtacagcga
atccatggaagtggaattaacagtcttgatattgatcctgttgagcaaaagtacatgttg
tctggtggatcagatggtgttattgcaatatacgatttggagaatgccacaaaaaagcta
cagtatacctgcaaggcaatctgtacagtgggcaggtcgcatggtcatgtgcacaaattt
agcgtggagacggttcagtggtatccttgcgacaccggcatgtttacatcaagctctttc
gataaaacgttgaaaatatgggatacaaatagactgctgcctgctgaagtgtttaccttt
gaaggaacagtctactgtcatcatatgtcaccaattgcaaccaaacactgtctgatagct
gttggtaccaagaatcctaaagtacagctgtgtgatcttaaatctggatcctgcacacac
attctgcagggccacaggggtgaggtgttatctgtgaaatggtcaccacgtcatgaacat
atactagtaacagcaagtgccgacagcaaagttaggttatgggatatacggaatgcttct
ggaagtttaattgtacttgaccagcacaatggtgaaatcgctaaatcatcttcagagtca
gccaacactgctcataatggacgtgctaatggcctctgctttactagtgatgggcttcat
cttttaactattggtacagatgatcgaatgagactctggaatagttccacaggggaaaat
acactggtgaactatggaagagtatgcaatggaagccgaaagaatctcaagttggcggtg
tcccatggctgcaggccagattttgcctttgttcctgttgatagctgtattgccgtttat
gatatctacgctggtcagctgctaacagaactcagggggcattataattatgtaaactgc
tgcacattccagtcttactttcaagagctctatagtggtggcagtgatgttaatatttta
gcatggattccagatcttggtcgaataggtgtggaaaatgatgaacctaaagagtgtgaa
gccagaacttctcaaactggcatcttccaagatgaatggagcagcagtgacaatgaaaac
tga
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