Leucoraja erinaceus (little skate): 129696952
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Entry
129696952 CDS
T09122
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129696952 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129696952 (nup43)
03036 Chromosome and associated proteins [BR:
leri03036
]
129696952 (nup43)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129696952 (nup43)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129696952 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD_LRWD1
EIF3I
Baculo_p33
Motif
Other DBs
NCBI-GeneID:
129696952
NCBI-ProteinID:
XP_055491064
LinkDB
All DBs
Position
5:16426538..16588696
Genome browser
AA seq
366 aa
AA seq
DB search
MYGRFVSRKISRIRWRPEPASALQPPESIATGSWDAEQNKVCLWEAYGTDNTESEHLFVE
DPELKCEINHDGDVMDLQFFDQERIVTASSTGSVNLFQHQPSSETLTLSRTWDRVHYHLN
TSAPCTSVVCSYPDIVTVGEDGRINHILADLKEPVRVIDNADSSSLNAVTFLRTTEILTV
NSIGQLKIWDFRKPGDKPLQIFSFTDERVPLHCVDRHPSQQHIVGTGGQDGTLCIWDIRQ
GSVPISVLDAHSAEMWEIHFHPSNPDHVFTCSEDGTLWHWNASVVNSEKPSYLQGNRSFV
LNNSKVDLNQSVSSAWVASDITKGKVDAKNLLSDYSLSVNSLDVVGEHLVCGTDAEAIYI
TRNLQV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtacggccgcttcgtgtctcggaagatcagtcgcatccgatggcggccggagcctgcc
tccgcgctgcagccgccggagagtatcgccaccggctcctgggacgccgagcagaacaaa
gtatgcctttgggaggcatatggcactgataacactgaatcagagcacttgtttgtggag
gaccctgagctcaagtgtgaaataaaccacgatggtgatgttatggatttacagtttttt
gaccaggagaggattgtcacagcttcgtctacaggaagtgtgaatctattccaacatcaa
cccagcagcgagactcttactctttcccggacctgggaccgtgtccactatcatttgaac
accagcgccccctgcaccagcgtggtttgtagttatcctgacattgttaccgttggggag
gatggacgaatcaatcatatcctagctgacttgaaggaaccggtgcgggtcatagataat
gctgacagcagttcactcaatgcagttacgtttctgcgaactacagagattttgacagtc
aattctattgggcagttgaaaatctgggacttcagaaaaccaggagacaaaccattgcag
atattttcttttacagatgaacgagtgcccctgcactgtgtagacagacatccgagtcag
cagcatatagtggggacaggtggccaggatggaacactatgtatctgggatatcagacaa
ggaagtgttccgatctccgtgttggatgctcattctgcagaaatgtgggaaattcatttt
cacccttccaaccctgatcatgtctttacctgctctgaggatgggactttgtggcattgg
aatgcatctgttgttaattctgaaaaaccttcttatcttcaaggtaacagaagctttgtg
ttgaataattccaaagttgacttgaaccagtcagtgagcagtgcatgggtcgccagtgat
attacaaaaggaaaagtcgatgccaaaaatctactgtcggattacagcttgtctgtcaat
agtttggatgtcgtgggagagcatttagtctgtggaacagatgcagaagctatttacatt
accagaaatctgcaagtctga
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