KEGG   Leucoraja erinaceus (little skate): 129696961
Entry
129696961         CDS       T09122                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129696961 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:leri03000]
    129696961 (tbp)
   03021 Transcription machinery [BR:leri03021]
    129696961 (tbp)
Transcription factors [BR:leri03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    129696961 (tbp)
Transcription machinery [BR:leri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129696961 (tbp)
  RNA polymerase III system
    TFIIIB
     129696961 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     129696961 (tbp)
SSDB
Motif
Pfam: TBP WS_DGAT_C NUDE_C
Other DBs
NCBI-GeneID: 129696961
NCBI-ProteinID: XP_055491077
LinkDB
Position
5:17061181..17078384
AA seq 302 aa
MDQSNNGLPPYAQGLSSPQGIMTPGNTIFSPMMPYGTGLTPQPVQSSNSISLLEEQQRQQ
QQAAQQSTTSQLTTQVSTNQPPQLFHSQTMTTTNLPGITSHYASPMTPMTPVTPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatcagtcaaacaatgggctgcccccttatgcacaaggattatcatcaccacaaggt
atcatgacacccgggaacacaatatttagtccgatgatgccatatggcactggcttgact
ccacagcctgtccaaagctcgaatagcatatctctcttggaagaacagcaacgacagcag
caacaagcagcacagcagtccacaacatctcaactaacaacacaagtttctaccaatcag
ccaccgcagctctttcattcacagacaatgaccaccactaatttaccaggcatcacatct
cattatgcttctccaatgactcccatgacgcccgtaactccagctactcctgcttctgag
agttcaggaattgtaccacaactacaaaatatcgtgtctacagtcaatttaggttgcaaa
ctggatctgaagacgatagctctccgagcaagaaatgctgagtataacccaaaacgtttt
gctgctgtcatcatgagaattcgggagcctcgtacaactgcacttattttcagctccggg
aaaatggtgtgtactggcgcaaaaagtgaagaacagtcacggttagctgcaaggaaatat
gccagagttgtacaaaagttgggatttccagcgaaatttctggattttaaaattcagaac
atggtaggcagttgtgatgtgaaatttccaattcgactagaagggctggtgctcactcat
cagcaattcagcagttatgaaccagagctgtttcctgggttaatctaccgaatgatcaaa
ccaagaattgtgttactaatatttgtgtctggaaaagttgtattgacaggtgctaaagtt
cgtgcggaaatctatgaagcttttgaaaacatctatccgattttgaaaggtttcaggaag
acaacataa

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