Leucoraja erinaceus (little skate): 129696961
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Entry
129696961 CDS
T09122
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129696961 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129696961 (tbp)
03021 Transcription machinery [BR:
leri03021
]
129696961 (tbp)
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
129696961 (tbp)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129696961 (tbp)
RNA polymerase III system
TFIIIB
129696961 (tbp)
RNA polymerase I system
SL1/TIF-1B
129696961 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
WS_DGAT_C
NUDE_C
Motif
Other DBs
NCBI-GeneID:
129696961
NCBI-ProteinID:
XP_055491077
LinkDB
All DBs
Position
5:17061181..17078384
Genome browser
AA seq
302 aa
AA seq
DB search
MDQSNNGLPPYAQGLSSPQGIMTPGNTIFSPMMPYGTGLTPQPVQSSNSISLLEEQQRQQ
QQAAQQSTTSQLTTQVSTNQPPQLFHSQTMTTTNLPGITSHYASPMTPMTPVTPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcaaacaatgggctgcccccttatgcacaaggattatcatcaccacaaggt
atcatgacacccgggaacacaatatttagtccgatgatgccatatggcactggcttgact
ccacagcctgtccaaagctcgaatagcatatctctcttggaagaacagcaacgacagcag
caacaagcagcacagcagtccacaacatctcaactaacaacacaagtttctaccaatcag
ccaccgcagctctttcattcacagacaatgaccaccactaatttaccaggcatcacatct
cattatgcttctccaatgactcccatgacgcccgtaactccagctactcctgcttctgag
agttcaggaattgtaccacaactacaaaatatcgtgtctacagtcaatttaggttgcaaa
ctggatctgaagacgatagctctccgagcaagaaatgctgagtataacccaaaacgtttt
gctgctgtcatcatgagaattcgggagcctcgtacaactgcacttattttcagctccggg
aaaatggtgtgtactggcgcaaaaagtgaagaacagtcacggttagctgcaaggaaatat
gccagagttgtacaaaagttgggatttccagcgaaatttctggattttaaaattcagaac
atggtaggcagttgtgatgtgaaatttccaattcgactagaagggctggtgctcactcat
cagcaattcagcagttatgaaccagagctgtttcctgggttaatctaccgaatgatcaaa
ccaagaattgtgttactaatatttgtgtctggaaaagttgtattgacaggtgctaaagtt
cgtgcggaaatctatgaagcttttgaaaacatctatccgattttgaaaggtttcaggaag
acaacataa
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