Leucoraja erinaceus (little skate): 129696969
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Entry
129696969 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9 isoform X1
KO
K10649
tripartite motif-containing protein 9/67
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129696969
04121 Ubiquitin system [BR:
leri04121
]
129696969
Membrane trafficking [BR:
leri04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
129696969
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129696969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
fn3
ANCHR-like_BBOX
zf-B_box
zf-C3HC4_4
PRY
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
129696969
NCBI-ProteinID:
XP_055491089
LinkDB
All DBs
Position
5:complement(17221088..17263935)
Genome browser
AA seq
710 aa
AA seq
DB search
MADMEDELKCPVCGAFYRDPIILPCSHNVCLPCARTILVQTPEAEPPSPQGRPPASASAS
DYDYLDLDKMSVYSEADSGYGSYTSFAPPIPSQKSPNGVRVFPPAPAPPPLRHSSLTCPQ
CHRSALLEERGLRGFARNRLLEAIIGRYQQSRAVAARCQLCERNPQEAAVMCEQCDVFYC
EPCQRRCHPARGPLAKHRLLPPAQGRGAGKPAPRKHSTCAEHELENHSMYCANCKIPVCY
QCLEEGKHSKHEVKALGAMWKQHKAQLSQALGGVSDKAKEAKEFLVHLKNMVQLIQENGV
EFEACLVAQCDALVDALNRQKAKLLTRVTKEREFKLKVVRDQISHCTLKLRQTTGLIEYC
LEVLKDNDTSGFLQISDALIKRVHVSQEQWVKGALEPKINPEFDLTLDNSPLLQTIHQLD
FIQMKIPSAVPPMPILQLEKCCTHNNNATLAWKAPPLNQTQIEGYILELDDGNGGQFQEV
YVGKETVCTVDGLQFNSAYNARVKAFNSAGVGPYSKTVVLQTSEVAWFTFDPNSAHPDIL
LSNDNLTITCNSYDDRVVLGSVALSKGIHYWELSIDRYDNHPDPAFGVARVNLLKDIMLG
KDDKAWAMYVDNNRSWFMHSNSHTNRTEGGICKGTTIGVLLDLNKRNLSFYINNVQQGPV
AFENLEGIFVPAVSINRNVQVTLYTGLEVPNHIKQAKSSLSYSPKSKTKY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatggaagacgagctcaagtgcccagtgtgcggcgccttctaccgcgacccc
atcatcctgccgtgctcgcacaacgtgtgcctgccgtgtgcccgcactatcctggtgcag
acgcccgaggccgagcccccgtcgccgcagggccgcccgcccgcctcggcctccgcctcc
gactacgactacctggacttggacaagatgagcgtgtacagcgaggcggacagcggctac
ggctcctacaccagcttcgcgccgcccatccccagccagaagtcgcccaacggggtgagg
gtgttcccgcccgccccggcgccgccgcctctccgccactccagcctgacctgcccgcag
tgccaccgcagcgcgctgctggaggagcgcggcctccgcggcttcgccaggaaccgcctg
ctggaggccatcatcggccgctaccagcagagccgcgccgtggccgcccgctgccagctg
tgcgagcgcaacccgcaggaggcggccgtcatgtgcgagcagtgcgacgtcttctactgc
gagccctgccagaggcgctgccacccggcccgcgggccgctggccaagcaccggctcctg
ccacccgcccaaggccgcggcgccggcaagccagcgcctcgcaagcactccacttgcgcc
gagcacgaactggagaatcacagtatgtactgcgccaactgcaagatacccgtctgctac
cagtgcctggaagagggcaaacacagcaagcacgaagtgaaggcgctcggagccatgtgg
aaacagcataaggcccaactatctcaagcattaggtggtgtttctgacaaagcaaaggaa
gccaaagaatttttggtgcatttgaaaaacatggtacaactaattcaggagaatggtgtg
gaatttgaagcttgtcttgtggcacaatgtgatgcacttgttgatgcgttaaatcgtcaa
aaagcaaaattgcttacgagagtcaccaaggagcgtgagtttaaattaaaggttgttcgg
gaccagataagccactgcacgctaaaactacgtcagacaactggtctcatagaatactgc
ctggaagtattaaaagacaatgacaccagtggattcctgcagatttccgatgcattaatc
aagcgtgtgcatgtgtcccaggagcagtgggttaaaggagctttagaacccaaaataaat
ccagaatttgatctgacgctcgataacagcccattattgcagacaattcaccagctggat
tttattcagatgaaaattccttctgcagtgccaccgatgccaattctacaactggagaaa
tgctgcacccataacaacaatgccacacttgcatggaaggcacctccactcaaccagact
cagatcgaaggctatatcctagaacttgatgatggaaatgggggacaatttcaagaggtg
tatgttggaaaagaaactgtgtgcacagtggatggacttcaattcaacagtgcttacaat
gcaagagtaaaagcctttaattcagcgggtgttggaccttacagtaaaactgttgttttg
cagacatctgaggtggcttggtttacctttgatccgaattctgctcatccagatattctt
ctatccaacgataatctgaccattacatgtaatagctacgatgaccgggttgtgctggga
tctgttgcactctccaaaggaatccactactgggaattatctattgatcgttatgacaac
caccccgatcctgcctttggagtggcaagagttaatttactgaaggatataatgttgggc
aaggatgataaagcctgggccatgtacgttgacaacaatcgcagttggtttatgcatagc
aattcccatacaaacaggactgaaggtgggatttgtaaaggtacaacaataggtgtcctg
ttggacctaaacaagcgcaacctctcgttttatatcaacaacgtgcagcaaggcccggta
gcctttgaaaatttggaaggcatctttgttcctgctgtcagcattaataggaacgtacag
gtgactctttatacaggactggaagttccgaatcatatcaaacaagccaaatcctcatta
tcctacagccccaaaagcaagaccaagtactga
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