KEGG   Leucoraja erinaceus (little skate): 129697144
Entry
129697144         CDS       T09122                                 
Name
(RefSeq) syndecan-1-like
  KO
K06257  syndecan 1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04512  ECM-receptor interaction
leri04514  Cell adhesion molecule (CAM) interaction
leri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129697144
   04514 Cell adhesion molecule (CAM) interaction
    129697144
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129697144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129697144
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:leri04090]
    129697144
   00535 Proteoglycans [BR:leri00535]
    129697144
Membrane trafficking [BR:leri04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    129697144
CD molecules [BR:leri04090]
 Proteins
  129697144
Proteoglycans [BR:leri00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   129697144
SSDB
Motif
Pfam: Syndecan Serglycin TM_ErbB1 FhbB
Other DBs
NCBI-GeneID: 129697144
NCBI-ProteinID: XP_055491371
LinkDB
Position
5:complement(39432573..39480405)
AA seq 348 aa
MKMPNFSLAFLLAMVYPAVLLANRPQKLHRTLFSIDVEESDIYSEEGDDDDLYSGSGSGS
GSGSGSGSGSGGGFMLKQGSFIAKLTTDFPTAPSTSSSSPLSSSQVTVTDIPRQGVVKDL
STIPVLPDLHAVDTTTDAIMTSRMPSTTISKGTRANHFRPRIVDIKHDTTVAAPLMSSAG
PKVPSMLPDHTTAIVKDESFTVSHVVAEHENEKATTVNTNIDLINEVVVKMTVETVNSPI
EDDIFIKDETVIPNGRNPNPIQDHQSSVMPPKDSYVRDFSTSGSFLERRELLAAAVVGGL
VGLMIAVLLVVLLVYRMKKKDEGSYTLDEAKQPNGGYQKPKKQEEFYA
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaagatgccaaatttcagcctcgcctttcttctggccatggtctaccccgccgtcctg
ttggccaacagaccacaaaagctgcaccgaaccttattttccattgacgtggaagagtct
gacatctattctgaagaaggtgatgatgatgatttgtactctggctctggctctggctct
ggctccgggtctgggtctggatctggttctggtggtggctttatgctgaaacaaggctct
ttcattgcaaagttgacaacagatttcccgactgctccttcaacatcttcaagcagtccg
ctttcttcaagccaagtaactgtgactgacatcccacgccaaggtgtcgtgaaagatttg
agcacaataccagtgcttcctgatttgcatgctgttgacaccactactgatgccataatg
accagccgtatgccttccaccaccatttcaaaaggaaccagagctaatcatttcaggcca
cgtattgttgacatcaagcacgacacaactgttgctgctcctcttatgagtagtgctggt
cctaaagttccaagcatgttacctgatcatacaactgctattgtcaaggatgaatccttc
actgtgtcacatgtggttgcagaacatgaaaatgaaaaagctacaacggtaaacacaaac
attgatctaattaacgaggttgtggtgaaaatgactgtggaaacagtaaacagtccaatt
gaagatgacattttcatcaaagatgaaacagtgattccaaatggtcggaacccaaacccc
attcaagatcaccaaagttcggtgatgccaccaaaagacagctacgtgcgagacttcagt
acatcgggcagttttctcgaaagacgtgaattattggcagctgctgtggttggaggactt
gtgggactcatgatcgctgtcctgctggtagtattgttggtatatcggatgaagaaaaag
gatgagggaagttatactttggatgaagcaaagcagccaaatggaggctaccaaaagcca
aaaaaacaggaggagttctacgcctaa

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