Leucoraja erinaceus (little skate): 129697181
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Entry
129697181 CDS
T09122
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129697181 (gtf3c2)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
129697181 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_Prp19
RBR
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
DSE1_N
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Protamine-3
WDR90_beta-prop_4th
WDR55
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
129697181
NCBI-ProteinID:
XP_055491464
LinkDB
All DBs
Position
5:45484677..45585241
Genome browser
AA seq
1271 aa
AA seq
DB search
MEPNLQKTCEADTEEAQKKVASIKTSQSSADSISHVNNNGLEPSSSAFELEIPDECSVHL
GKSSLGTSDITEKGCKRLKKEDNTDGDTLPEPEITKYVAKSLLALKTSVQPLIGDIKLCP
ENVSEAILQQSNKRERRKSVHHSFEHAHSTMVKDTVMQTEISSNETNLHPKTVVTRQNIY
HIERHSNKGQPIDHSRCSAVDKNTVTPNEFGLEPHLTSDTLPLQQNVSKKRGRCKNIQST
LVCGPAVDLCNVPTDGGSGEVRSVPVVVPVKLPTKQGRKPKSAMVVAVQEILSHSNIENG
DENEMGSVQQVKITKKQGRKPKNSKTVSVEEAVPQTPSMENCSSFENGGDKEMGMPELTR
IPKKRGRKPKNAKAVPVEKVMLQISSTGRYDNAGDGIDNEMGVSPMMKIPKKRGRKPKNI
KPVPSDVPQPPSIEVCIDDDNGEASERQMVVPLKIPKKRGRKPKSEMVAREENTDTHGLL
RPIVQKLLEHTDADEELKASGRPKRRAARAALLYLREIVEEIKSPSYKIDEVTASTKSEL
DQSHCKLLSETKPSPTQRRGKRKKKSCDDDVFDDLSDDKDFVVSDGVFDEDEEEEEEEED
EELSEVDIPGDITESDLDVPSNEDYQKPRKSPINEQSRSAKRRLYGNFANGLPNHIMVPV
WGATTITIKHREEHHSPWVFPDWIPSTQAWSFISQSESLKYLPSETKSPYFKIKREGHRD
DSTIQNLSRFQSLPAHKESWDVNFFVGGPIWCLEWCPTPEGSAACQYAAIYCNKGMDDRH
KLMCQHVEPTLLQIWQLGDLQQEHCPQTNAALAYGIATDHGCIWDMKWCPSGAWELPETT
RKQPQMSRLGIIAAAFSSGKVVVYSLPHPESLHMYKMKLLKASSMQGPIICKVQCTVILE
IGSVQYSGSSQCGQCFCLDWMPSEEHQCLAAGFYDGTVALWNLNTKSLLLRVQQGDGSLK
IYPFHSFVAHDHAVKAIAWSKANSNFLVTASPDRKIKFWDLRRTYQPVNDIKRNLNTEVA
WLLPWCGVMVAQENCYAAFGLSGIHFLDAGFLGYKPYFAAPRTGTVWSISGSDWLNTCVS
GDNTGEVIAVILPDCMNNTMNIKRPNERRFPIYKADLVDRCTASNYSAPCSNQKEKEAKI
HKRSSGKEKEELNSSPIAEPKTYSETVKKYYVMFDDTDLKSFKNLFSRGPFKRMQTIDKG
KTYPDRMPLESVHKVRFNPNLDAHGWVISAGQSGIVRAHCVRCLNTHVSRRLIKEYQAQF
NSMFQPAVTSN
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatcttcagaaaacctgtgaggctgatacagaagaagcacaaaaaaaagtt
gcatccataaaaacttcacaaagttctgcagacagcatttctcacgtgaataacaatgga
ctggaaccttcatccagtgcttttgaattggagatccccgatgagtgcagtgtgcattta
ggcaagagctctttgggcacttctgatattacagaaaaaggctgtaagcgcttaaaaaaa
gaggataatacagacggggatactttgcctgaacctgaaataaccaaatatgttgcaaaa
tcattgcttgctcttaagacatcagtgcagccactcataggagacataaagctgtgtcca
gaaaacgtctcagaagccattttacagcaaagcaataaaagagaaagacgcaaatcagta
caccactcttttgaacatgcgcattccacaatggtcaaggatactgtgatgcaaacagaa
atctcttcaaatgaaaccaatctccaccctaaaaccgtggttacacgtcaaaatatttat
catattgaaaggcattcaaataaaggccagcccattgatcattcaagatgttctgcagtg
gacaagaacactgtaactccaaatgaatttgggcttgagcctcatttaacttctgataca
ttacctttacaacaaaatgttagcaaaaaaagggggagatgcaaaaatattcaaagtacc
ttggtgtgtggtccagctgtagatctttgtaatgttccaactgatggtggttctggcgag
gtacggtcagttccagtagtcgtaccagtgaaactgcccactaaacaaggaagaaaacct
aaaagtgccatggtagtagcagtgcaggaaattctcagtcacagtaacattgaaaatgga
gatgagaatgagatgggaagtgttcaacaagtgaaaattacaaagaaacaaggaaggaag
cctaagaattcaaaaacagtgtcagtggaagaagcagtgcctcaaacaccatcaatggag
aattgttctagttttgagaatggtggtgataaggagatgggaatgcctgaattaacgagg
atcccaaagaagcgaggaagaaaacccaaaaatgcaaaagcagtacctgttgaaaaagta
atgctgcaaatatcatcaacaggaagatatgataatgctggggatggaattgacaatgaa
atgggagtatcgcctatgatgaaaatcccgaagaaacgaggaagaaagcctaagaatata
aaaccagtaccttctgatgtaccacaacctccatcaatagaggtgtgcattgatgatgac
aatggtgaagccagtgaaagacaaatggtagtaccgctgaagattccgaagaaacgggga
agaaagccgaaaagtgaaatggtagcccgagaagagaacacagatactcatgggctattg
agaccaattgtacaaaaattattggagcatacggatgcagatgaagaactaaaagcaagt
ggacgaccaaagagaagggcagccagagctgccttgctttacctgcgtgaaatagttgag
gagataaaatcaccttcttataaaattgatgaagtgactgccagtacaaagagtgaacta
gaccaatctcactgtaagttgttgtctgagactaaaccctcccctacacaaagaagagga
aagaggaagaaaaaatcttgtgatgatgatgtttttgatgacttgtcagatgacaaagac
tttgtggtttctgatggagtattcgatgaagatgaagaagaagaggaagaagaagaagat
gaagaacttagtgaagtcgacatccctggtgatataacggagtctgatctagatgttcct
tccaatgaggactatcaaaaaccaagaaagagtcccataaatgaacaatctcgtagtgca
aaacggcgattatatggaaattttgcgaatggcctacctaatcatataatggtgccagta
tggggagccacaacaattacaataaagcatcgagaggagcatcactccccatgggtattt
ccggattggattccttcaacacaagcctggagttttatttcccaaagtgaatcgcttaaa
tatttgccaagtgaaacaaagtcaccatattttaaaattaaaagggagggacatcgagat
gattccacgattcagaacctgagcagatttcagtcattaccagctcacaaggaaagttgg
gatgtaaacttctttgttggtggcccaatatggtgtctagaatggtgcccaaccccagag
ggttcagctgcctgtcagtatgctgctatttattgcaacaaaggaatggatgatagacat
aaactgatgtgccagcatgtagagccaacattgcttcagatatggcaattgggtgatctc
cagcaagaacattgcccacaaacgaatgctgctttagcttatggtattgcgacagaccat
ggatgtatttgggatatgaagtggtgccccagtggggcttgggaactgccagaaaccact
agaaagcaacctcagatgtcgagacttgggatcatagcagctgcattttcctctggaaaa
gttgttgtctacagtttgccacacccagaatccctacatatgtataaaatgaaactttta
aaagcttcgtctatgcaaggaccaatcatctgcaaggttcagtgcactgtaattttagag
attggatccgttcaatatagtgggtcgtcacagtgtggacagtgtttctgccttgactgg
atgccctctgaggaacatcaatgtttggcagcgggtttttatgacggtacggttgctctc
tggaatttgaatacaaaatcattactgttgcgagttcagcaaggcgatggaagtttgaaa
atctatcctttccattcctttgtggcacacgaccatgctgtcaaagccattgcttggagt
aaagcgaacagcaattttctagtgacagctagccctgacaggaagatcaagttttgggat
ctcaggagaacataccaacctgtcaatgatatcaagcgaaacttaaacactgaagtagct
tggttgttgccctggtgtggagttatggtggcacaagaaaattgttatgcagcgtttggc
ctcagtggaattcactttttggatgctggttttcttggatataagccttattttgctgct
ccaagaacaggaactgtgtggagtatttctggttcagattggctaaatacctgtgtgtct
ggagacaatacaggagaagtaatagctgtcatccttccagactgtatgaacaataccatg
aacataaagcgacctaatgagcgtcgatttcctatttataaagctgacctcgtcgatcgc
tgtactgcaagcaactattcagctccctgttcaaatcaaaaagagaaggaggccaagatt
cataaaagatcatcaggaaaagagaaagaagagttaaattccagccctattgctgaacca
aagacatatagtgagacagtgaagaaatattacgtgatgtttgatgacaccgacctgaaa
agtttcaagaacttattttccagaggaccttttaagagaatgcagacaatagacaaagga
aaaacatatcctgacagaatgccactggaatctgtacataaggtccgtttcaatcccaac
ctggatgcccatggatgggtgatctctgctgggcaatctggcattgtccgagcccactgt
gtgcggtgccttaacacacacgtgagcaggaggttgatcaaagaataccaagcacaattc
aattctatgttccagcctgcagtaacaagcaactga
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