KEGG   Leucoraja erinaceus (little skate): 129697218
Entry
129697218         CDS       T09122                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129697218 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:leri03041]
    129697218 (cdc5l)
   03400 DNA repair and recombination proteins [BR:leri03400]
    129697218 (cdc5l)
Spliceosome [BR:leri03041]
 Complex B
  Other components
   Prp19 complex
    129697218 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    129697218 (cdc5l)
DNA repair and recombination proteins [BR:leri03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    129697218 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 129697218
NCBI-ProteinID: XP_055491530
LinkDB
Position
5:48910975..48954658
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDQEEEAADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTAEENYQALEPDFK
RLRQQHLDGELRSEKEESEQKKDKQRLKKKKESDLPSAILQISGVSEFTKKRSKLVLPAP
QISDAELEEVVKIGQASEMACQAVEESGMPNSASNALLSEYSIANSGLSLRTARTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQIVQTPNTVLATPFRTPTHGS
DALTPRSGMTPKTGAVVTPGRTPLRDKLNINPGDEVVDYNDPSYTKQLEREHREQLRVGL
LNLPTPKNDFEIVLPENAERELEEQDTEDNFIEDAADVESRRQAMKDAERERELKKRHQS
VQRSFPRPTEVNETILRPLNVEPPLTEMQKAEEMVKKEMIVMLHYDTLHHPYVDLFNKRG
KGAGSSSGNVEHIAFLEHNRYEKINKEDMKKASDLLCQEMEIVKHGMGHGDLPLDAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLETNRNHMTTEAKQAAKMEKKLKIL
LGGYQSRATGLMKQLSDQWDQIEQAHLELCTFEELKKHEDIAIPRRQESLREDVARQQER
EKELQQRFADLLLEKEGLVAAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggataatgatcaaaggaggcgtctggaggaacacggaggatgaaattcttaaa
gcagcggtgatgaaatatggcaaaaaccagtggtcacgtattgcatcactgttgcaccgg
aagtcagccaaacaatgcaaagccagatggtatgagtggctagatccaagtatcaagaag
acagaatggtcaagggaggaagaagagaagttactccatttggcaaagctcatgccaacc
cagtggaggaccattgctccaattattggcagaacagctgcccagtgcttggaacattat
gaatatcttctagataaagctgcccagagagaccaagaagaggaagctgctgatgatcct
cgaaagcttaaacctggtgagatcgatccaaacccagaaactaaaccagccaggcctgac
ccagtcgatatggatgaagatgaacttgaaatgctgtctgaggctagagctcgtttggcc
aatacgcaaggcaagaaagctaagagaaaagcacgagaaaagcagcttgaagaagccaga
cgactagcagcacttcagaagcgcagagaattgcgagccgctggcattgagatacagaaa
aaaagaaaaaagaagagaggtgtggattataatgctgaaattccgtttgaaaagaaacct
gctccgggtttttatgataccgctgaggaaaactatcaagcacttgaaccagatttcaaa
agactccgccagcaacatctagatggagaactacgatctgagaaagaagaatctgaacag
aagaaagataagcagcgtctgaaaaagaagaaggaatctgatttgccttctgctatatta
cagatcagtggtgtatctgagtttactaagaaaagaagtaaattagttcttcctgcacca
cagatctctgatgctgaactggaagaagtggtcaaaattggacaggcgagtgaaatggcc
tgccaagctgttgaggaatctggcatgccaaattctgcctccaatgctcttctttccgaa
tatagcattgccaattcgggtttgagtttgcgaactgcacgtactcctgcagcacaagat
cgtattcttcaggaagctcaaaatttaatggcactgacaaatgttgatacgcctttaaaa
ggaggactgaacacccctctccatgaaagtgatttttctggagtaaccccacagcgacag
atagttcagacaccaaatacggtgcttgcaacacctttcaggaccccaacgcatgggagt
gatgctttgactccacgcagtggaatgacaccgaaaactggtgcagtagtgactcctgga
aggactcctttacgagataaattgaatatcaatcctggagatgaagttgtggattataat
gatccttcgtacaccaaacaactggaaagagagcaccgggagcaactacgggtgggcctg
ctcaatcttcctactcctaaaaatgacttcgaaattgtcctgccagagaatgcagaacgc
gaactggaggaacaggacacagaagacaacttcatagaagatgctgctgatgtggagtca
cggagacaggcaatgaaagatgctgaacgtgagagggaattaaaaaagagacaccaatca
gtacaacgaagttttccaaggcctacagaggttaatgaaaccatcttgcgtcctctaaat
gttgagccacctctaactgaaatgcagaaagctgaagagatggtgaagaaagaaatgatt
gtcatgcttcactatgatacgttgcaccatccatatgtagatctgtttaataaaagaggg
aaaggagcaggatcaagttctggtaacgttgagcatattgcttttctggaacacaacaga
tatgagaagatcaataaagaagacatgaaaaaggcgagtgatttgttgtgtcaggagatg
gaaattgtaaaacatggtatgggtcatggagatcttcctcttgatgcatataaccaggtg
tgggaagaatgttacagtcaggtgctgtatctgcctggacagaacagatacactcgtgcc
aacctggccagcaagaaagatcgtatagagtcactggaaaagaaactggagaccaacaga
aatcatatgaccacagaagcaaaacaggcagcaaaaatggagaaaaagctgaagatcctg
cttggtggttatcagtcgcgtgctacagggcttatgaaacagttgagcgatcagtgggat
cagattgaacaggcacatttagaattatgcacctttgaggaattgaagaagcatgaagat
attgctataccaagaaggcaagagtctttgagggaagatgttgcaagacagcaggagaga
gagaaggaactccagcaaaggtttgcagacctgcttctggaaaaagaagggcttgtggct
gccaagtattga

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