Leucoraja erinaceus (little skate): 129697462
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Entry
129697462 CDS
T09122
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04020
Calcium signaling pathway
leri04144
Endocytosis
leri04510
Focal adhesion
leri04540
Gap junction
leri04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129697462 (pdgfra)
04020 Calcium signaling pathway
129697462 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129697462 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
129697462 (pdgfra)
04540 Gap junction
129697462 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129697462 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
leri01001
]
129697462 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
leri04090
]
129697462 (pdgfra)
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129697462 (pdgfra)
Protein kinases [BR:
leri01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129697462 (pdgfra)
CD molecules [BR:
leri04090
]
Proteins
129697462 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
VEGFR-1-like_Ig-like
Ig_2
V-set
VEGFR1-3_N_Ig-like
C1-set
Ig_4
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
129697462
NCBI-ProteinID:
XP_055492040
LinkDB
All DBs
Position
1:complement(64854272..64922885)
Genome browser
AA seq
1092 aa
AA seq
DB search
MATFWKTLLIVDCFFLGVLKGPHLALCQMLPDVYPNEVEIRVALHSTFTLTCSGENEVDW
DLPFYDIKENINKKNKNNNSGNFIQTLEVTKASGILTGKYICYYPALQHDDNDEIEGRGI
YVFVPDPDYPFIPQLNFENVVIVAEGEEAMIPCRVSDPDVHVTLTNIDTKNIISATYDNK
EGFKGPFKEGMYVCITTVNGVEHRSEEYIVNTFKVGKDLKVEIQAIKSIVKVGESIRVTC
SVVDNEVVTINWNYPGENGKEDLKEDKHPHIKITKTLEIENATLEDTGIYECSVSHATQD
TYSKKQVHIQVNEKGFIHLVPSFGEEEFADLHEVKQFVVNIEAYPVPTVRWLKNNVTLHE
DNNEVMINTIKAQENRYQSNLTLIRATKQDSGAYSIIVEHEDNSTIFTFFLQVKVPAKII
NLFDEHHGSANGQIVSCSADGTPSPEVEWLICTDLKKCANDSMLWNVLHSNSSGINIETH
QTKTNLVESKLTFLKVDNTVAVKCIAKNELAVVAREVKLVAHNPHSELTVAAAVLVLLVI
VIISLIVLVVVWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDTRWEFPREGLVLGR
ILGSGAFGKVVEGTAYGLSRSQPVTKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI
VNLLGACTKAGPIYIITEYCFYGDLVNYLHKNRDSFINRYSEKGKKEMDIFGINPADEST
RSYVILSFESNGDYMDMKQAGSTQYVPMLERKASFKYTDIQQHVYDHPPSQKKKSLTDTD
ETWNPLSDDSSEGLSFMDLISFTFQVAQGMEFLASKNCVHRDLAARNVLLAQGKVVKICD
FGLARDIMHDSNYVSKGNTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY
PGMMVDSNFYNKIKSGYRMTKPEHASSDVYDLMVKCWNSEPEKRPSFSCLAEIIGCLLPE
GYKKSYRQMNDDFLKSDHPAVARMRVESTDPYIGINYSNEEKKKDRESGFDEQRLSADSG
YIIPLPDIDPITDSDPTSSRNRHSSQTSEESAIETGSSSSTFIKREDETIEDMEMIDDMA
IDPSDLVEDSFL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggccacattctggaagacattgctgattgtggattgcttcttcctgggagtcctcaaa
gggccccacctggctctgtgccagatgttaccagatgtttaccccaacgaagtcgaaata
agggtcgccctccattcaactttcaccctgacgtgctcaggggagaatgaggtggactgg
gatttgccgttttatgatattaaggagaacatcaacaaaaaaaataaaaacaacaatagc
gggaactttatacaaacactcgaggttaccaaagcatcagggatcctcactggaaagtat
atctgctactacccagcacttcagcacgacgacaatgatgagattgaaggccggggtatt
tatgtgttcgttccagatcccgactatcctttcatcccacaattgaattttgagaacgta
gtaatagtggcagagggtgaagaggctatgattccgtgtcgagtttctgatccggacgtg
catgtcaccttgactaatatcgataccaagaacataatctccgctacctatgacaataaa
gagggattcaaaggccccttcaaagaggggatgtatgtctgcatcacaacagtcaatggt
gtggagcacagatccgaggagtacattgttaatacatttaaagtgggtaaggatctgaaa
gttgaaatacaagccattaaaagtatagttaaagtcggagagagcatccgtgtaacctgt
tctgtagtggacaatgaagtggtgactatcaactggaattatccaggagaaaatgggaag
gaagatctcaaggaagataaacacccacacataaaaataacgaagactctggaaattgag
aatgccacgctggaagatactggaatctatgaatgttctgtgtcacatgcaactcaagac
acctacagtaaaaagcaggttcacatccaagttaatgagaagggcttcatacatttggtt
cccagttttggggaagaagagtttgcagacctgcatgaagtcaagcaatttgtggtcaac
attgaggcctacccagtacccactgttcggtggctaaaaaacaacgttactctgcatgag
gataacaatgaagtgatgatcaacaccattaaagcccaggaaaacaggtatcaaagtaat
ttaaccctgattcgtgcaacgaaacaagacagtggagcctacagcatcattgttgaacat
gaagataatagtactatctttacattcttcttgcaggtgaaagtgccagcaaagatcatc
aatctttttgacgagcaccatggctctgcaaatggccagattgtttcatgttctgcagat
gggacacccagcccagaggtcgaatggctaatctgtacagatctaaaaaagtgtgcaaat
gactcaatgctgtggaatgttctccacagtaattcgagtggtataaatatcgagacccat
cagacaaagacaaatcttgtagagagcaaactgacctttctgaaagtggataacacagtg
gctgtgaaatgcattgcaaagaacgagcttgcagttgttgcacgtgaagtcaaactggtg
gctcacaatccacactccgaattgactgtggcagctgcagtattggtgctgctggttatc
gtgatcatttctctgatagtgctagttgtagtttggaaacagaaaccaagatatgagata
agatggagagtcattgaatccataagtccagatggccatgaatatatttatgttgacccg
atgcaacttccctatgatactagatgggagtttcctcgggaaggacttgtccttggccgc
atccttggttctggggcatttggaaaggttgttgaaggaactgcatacggtttgagtcgc
tcacagcctgtcacgaaagttgcagtgaaaatgctgaaacctacagctcgttccagtgag
aagcaggccttgatgtcagagctgaagataatgacccacctcggtccacatttaaacatt
gttaatctgcttggggcttgcacaaaagcaggtcccatttacatcattacagaatactgt
ttctatggggacctggtcaactacctgcataaaaatagggacagttttattaatcgatat
tctgaaaaaggaaagaaagaaatggatatttttggtataaaccctgctgatgaaagcaca
cgaagttacgtgatcttgtcttttgagagcaatggggactacatggacatgaaacaagca
ggaagcacccagtatgttccaatgttggaaaggaaagccagcttcaaatatactgacatc
cagcagcatgtgtacgatcatccaccttcacagaaaaagaagtccttaacagatacagat
gaaacatggaatcctctttcagatgacagctcggaggggctttctttcatggatctaatc
agcttcacctttcaagttgcacaaggaatggagtttctagcttctaaaaattgtgtgcat
cgtgacctggcagcacgcaacgtgcttctagcgcaaggaaaagttgtcaagatctgtgac
tttggtctggcacgagacatcatgcatgactccaactatgtttctaaaggcaacactttc
ctacctgtgaagtggatggctccagagagcatatttgacaacctgtacactacgctaagc
gatgtttggtcttacggcattcttctgtgggaaatattctccttgggtggcacgccatat
ccaggaatgatggtagattccaacttttacaataagataaagagtggctacagaatgacg
aaaccagaacatgcttcttcagatgtctatgacctgatggtgaaatgctggaacagtgaa
ccggagaaaaggccttcctttagctgcctggctgagattattgggtgtttgttgccagag
ggctacaagaagagctacagacagatgaacgatgactttctgaagagcgaccatccggct
gttgctcgcatgcgggtagaatccacggacccttacattggaattaactacagcaatgag
gagaagaagaaagacagggagagtggttttgatgagcaacggctaagtgctgacagtggt
tatattatcccactgcctgatattgacccaatcacagacagtgaccccacttcttcaaga
aaccgccacagttcccagacatctgaagaaagcgcaatagagaccggttccagcagctca
acttttataaagcgtgaggatgagaccatagaagacatggaaatgattgatgacatggca
attgatccctcagacttggtggaagatagcttcctgtaa
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