Leucoraja erinaceus (little skate): 129697505
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Entry
129697505 CDS
T09122
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129697505 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129697505 (srfb)
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
129697505 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
129697505
NCBI-ProteinID:
XP_055492114
LinkDB
All DBs
Position
5:84392166..84442037
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AA seq
506 aa
AA seq
DB search
MLQSQAGASDSASTTGILQPAAPPPPAGNMREPPLSTAAYSGSEPSSDEEDELVAPPAPV
DRRGLKRRVSDMEAAAGLARVSGSGHDPSLDCGPGLAAAGGGGVYGVAAVAGGAAAAAGL
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSETD
SSGENKDGLKPTTFTVANVPGSTCVNQSASNTSTNLQVSSGHSFPITNYLAPVTAINSNG
SVFKPGGGGNPGGMVQIPSGFTLMSGTSLPGTPSIPLGPLQSHSLTIQGQQGQVMGGQSQ
PGQQTVFRFPASATGQIVSIAGGGLAQQLPVQTIQLHQSPAQVSVHQSTQHTATLSDSST
DISQTSTSATMTLPATIVTSSAPSSMASHVMYPSPHGTVMYTTSSPGLSDGLAVLNAFSQ
PSSAMQVSHGQMHEQDDGDWPALQHW
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagccaggccggagccagcgacagcgcctcgaccacgggtatcctgcagccc
gcagcacccccgccgccggccggcaacatgcgggagccccctctctccaccgccgcctac
agcggctccgagcccagcagcgacgaggaggacgagctagtggcgcccccggccccggtg
gacaggcgagggttgaagcgcagagtgtcggacatggaagctgccgccggcttggccagg
gtgagcggcagcggccacgaccccagcctggactgcggccccgggctggcggcggccggc
ggcggcggagtctacggggtagcggctgtggccggtggagcggcggcggcggccgggctg
aagccgggcaagaaaacgagagggcgggtgaagatcaagatggaattcatcgacaacaag
ttgaggcggtacacgactttcagcaagaggaagacgggcatcatgaagaaggcctacgag
ctttccacgctgacgggcacgcaggtgctgctgctggtggcgagtgagacgggccacgtg
tacaccttcgccacccgcaagctgcagccgatgatcaccagcgagacgggcaaggcactg
atacagacatgcctaaactcaccggactcgccgccccgctccgaccccaccaccgatcag
cggatgagtgccacgggcttcgaggagactgacctcacctaccaagtgtcggagaccgac
agcagcggggagaacaaggacggcctgaagccgaccaccttcacggtagccaacgtgccc
ggctcgacttgcgtgaaccagtcggcctccaacacctcgaccaacctgcaggtgagcagc
ggccacagcttccccatcaccaactacctggccccagtcaccgccatcaacagcaacggc
agcgtcttcaagcccggcggcggcggcaaccctggtggcatggtgcagatccccagcggc
ttcaccctcatgtcaggcacttcactgccagggacgccatccatccccctgggcccattg
cagtcacactcgctcaccatccaggggcagcaggggcaggtgatgggcggccagtcgcag
ccaggacagcagaccgtcttccgcttccctgcctctgccaccggccagatcgtctccatt
gcaggtgggggccttgcgcagcagttaccggtacagaccatccagctgcaccagtcgccg
gcgcaggtcagcgtgcatcaatccacgcagcacaccgcaaccctcagcgacagcagcacc
gacatctcgcagacttccaccagcgcaaccatgacactgcccgccaccatcgtgacctca
tcggccccctcgtccatggccagccacgtgatgtatcccagccctcatggaactgtgatg
tacaccacctccagccccggcctgtccgacggccttgcagtgctcaatgccttctcgcag
ccgtcctcagcgatgcaggtgtcacacggccagatgcacgagcaggatgacggtgattgg
ccagcactccagcactggtaa
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