Leucoraja erinaceus (little skate): 129697794
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Entry
129697794 CDS
T09122
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129697794
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129697794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129697794
NCBI-ProteinID:
XP_055492397
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All DBs
Position
6:complement(11452858..11454615)
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AA seq
339 aa
AA seq
DB search
MYSLMMESELQSPGHPISAPGGGTTVPAAGTNGKLSGERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLMSEGEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLK
KDKYSLPTALLPQGPGALGLSQRLDAAGVAGAYGHMNGWANGSYPGSAAAAAAAVMMQEQ
LSYSQHPALAAVGAGGGGDGGAGGGAVHHHHHHPQQLHRYDMPLQYSPLTGTQSYMSGSP
SYGTLSSGYSHQPAGGIQLASMVKLEPAPSPPVSSHSRPPCSGDLREMISMYLPGGGGGG
GGGGGGETGDPSSSRLLPLSQHYQSPASGVNGTIPLTHM
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtctgatgatggagagtgagttgcagtctccggggcatccgatcagcgcgccg
ggcggcgggaccaccgtgcccgctgcgggcacaaacggcaagctgagtggcgagcgggtg
aagagacccatgaacgccttcatggtgtggtcccgcgggcagcggaggaagatggctcag
gaaaaccccaagatgcacaactcggagatcagcaagcgcctgggagctgagtggaagtta
atgtccgagggagagaagcgacccttcatcgacgaagccaagagactccgagcgttgcac
atgaaagagcacccggattacaagtaccgtccccgccggaagaccaagactctactgaag
aaggacaagtactcgctgccgaccgcgttgctgcctcaaggccccggagcgctcggctta
agccagcggctggacgcggcgggcgtggccggcgcttacgggcacatgaacggttgggcg
aatggctcttacccgggctcggcggcggcagcggcggccgcggtcatgatgcaggaacaa
ttgtcttactcccagcacccggcgctggcagcggtgggagcaggaggagggggcgacggg
ggcgccggcgggggagcagtacatcaccaccatcaccacccgcagcagttgcaccgttac
gacatgcccctccagtacagcccactcaccggcacgcagagctacatgagcggctcccct
tcctacggcactctctcatccggctacagccaccagccggccggtggcatccaactggcc
tcgatggtgaaattggaaccggcccctagtcccccggtcagctcccactcccgccccccg
tgctccggggacctaagggagatgatcagcatgtatttacccggaggaggaggaggagga
ggaggaggaggaggaggagaaacaggcgacccgtcttccagcagactgctgccactttct
caacactatcagagcccggcttcgggggtaaatgggaccattccactaactcacatgtga
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