Leucoraja erinaceus (little skate): 129697948 Help Entry 129697948         CDS       T09122                                  Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism leri  Leucoraja erinaceus (little skate) Pathway leri03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:leri00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     129697948  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:leri01009]     129697948   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:leri04515]     129697948 Protein phosphatases and associated proteins [BR:leri01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      129697948 Cell adhesion molecules [BR:leri04515]  Cadherins   Protocadherins    129697948 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 MAP17 DUF6377 TMEM154 EphA2_TM RCR V_ATPase_I Motif Other DBs NCBI-GeneID:  129697948 NCBI-ProteinID:  XP_055492666 LinkDB All DBs Position 6:complement(18848970..19605687) Genome browser AA seq 1479 aa AA seqDB search MDMRDFYLFLALVALLTVDSALAQELVYTIQEELPENILLGNIPRDLNISRLNAATGSSA NLIYRLVSKAGEVPLLRVSSSTGEIFTTANRVDREKLCAGTYTDTDCFFEVEVVILPNDH FRLVKIKVVVRDVNDNAPMFPSPVINISIPENTLVNSRFPVPSATDPDTGSNGVQRYQLL NGQGAYGLDVVESPEGEKWPQLIVQRSLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTV SDVNDNRPVFKESQLEVRLPENAPLGTSVIQLHATDADVGSNAQVRYLFSPQVSAAVRRH FALNSTAGLITVQRALDREETSLHKMTVLATDGSSSPARATVTVNVTDVNDNPPTIDIRY IISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGRVVCYIEKEVPFHLKAVYDNQYLLE TSALLDYESTRDYSFRIVASDSGKPSLNQSALVRVRLEDENDNPPVFNQPVIELSVAENN HRGLYLTTISATDEDSGKNAEIVYQLGPNASSFDLDRKTGVLTASRVFDREEQERYIFTV TARDSGNPPLQSQAAVIVTILDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDADAG ENAEVMASVVGDNDNFILHPVNGVIRSNVSFDRELQSSYTFEVKAIDRGRPVRTSIAKVT INVIDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYSIVSGNT KGLFRIDPVTGNITLEEKPAVADQGLHRLVVNISDLGYPKPLHTLVLVYLYVNDTISNAS YINELIRRTMETPLDKNIGDSTQPWQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRQSR FKATQRNKQGAEWMSPNQESKQNKKKKRKKRKSPKNSLLNFVTIEESKPDDPAHEPINGT ITLPAELEEQTIGRFDWNTTPPTTFKPSSPDLARHYKSGSPQPSFHLKPDTPVSAKKHHV IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPD GSQESCSDSGLGDHEPVNGGPLISHPLPLVQPQDEFYEQASPDKRTEADGNSDPNSMYMS SSTNIMYRVSTGGKLTKMVFKVTKRQKPAFSMWATCMLMKQFTKLQRLVRATKSKTPASE GQQRGCNLTAARVNKVSKLGRAVKDCRKRISDLRLGARRKGAFNKKRGAVQHKDVAKEKV LTWEEEKVTPIVHLVEHGPDASCNSSDSDEYCTSERRPEQHQITVVLEEKVSAQKQGHGM VNQGTETEEVPQGSCEECREDSADGQWKAARYMKVPSSEQSRQQGTYQPEAMRPAPSAVP PNSHNTPEGDLCPICRRLDALVSTVQRGFNHMHRDINALQNASQYRGARLSQNVMSLVGA MHTLVRLHHFSALPRRDVAIQTSIVLTEQCQGENVGAASNDLLTTSTETVVTSSDNVQTA NNTAAPGDTVVEISLDPNGDSDESMSIEESSLNSSDNDW NT seq 4440 nt NT seq  +upstreamnt  +downstreamnt atggacatgcgggatttttacctgtttctggcgctggttgctctcctgacggtggactcc gctctggctcaggagctcgtctacaccattcaagaggagctgcccgagaatatcttgctg ggcaacatccccagagatctcaacatctcacggctaaatgcggccacggggtcgagtgcc aatcttatctacaggctggtgtccaaggcaggcgaggtccccctgttgcgggtgtccagc agcaccggggagatcttcaccacggccaacagggtggaccgcgagaaactatgcgccggc acctacaccgacaccgactgcttcttcgaggtggaggtggtcatcttgcccaacgaccac ttcaggctggtcaagatcaaggtggtcgtgcgcgatgtcaacgacaacgcgcccatgttc ccgtctcctgtgatcaacatctccatcccggagaacactctggtcaacagccgcttcccg gtgccttcggccaccgacccggacacgggtagcaacggggtgcagaggtaccagctcttg aacggccagggggcttacggcttggacgtggtggagagccccgagggcgagaagtggccg cagctgatagtccagcgcagcctggaccgggagcagaaagacacctacgtgatgaagatc aaggttgaggacggggggagcccgcagaagtctagcaccgctatcctgcaagtgacggtg agcgatgtgaacgacaaccggccggtgtttaaagagagccagctggaggtgcgcttgccc gagaatgcgccgctgggcacctctgtcatccagctgcacgccaccgacgccgatgtgggc tccaacgcccaggtccgctatctcttcagcccgcaggtctccgccgccgtccgcaggcac ttcgccctcaacagcacggcgggtctcatcacggtgcagcgagccttggaccgggaagag acctccctgcacaagatgaccgtgctggccaccgacggcagctccagcccggccagggcc accgtcaccgtcaacgttaccgatgtcaacgacaaccccccaaccatcgacatccgctat atcatcagccccatcaacggcaccgtctacctgtccgagaaagatcccgtcaacaccaag atcgccctgatcaccgtgtcggacaaggacaccgacgtgaacgggagagtggtctgctac attgagaaagaggtgcctttccatctgaaggcggtatatgacaaccagtacctcctggag acctctgccttattggactatgagagcacaagagattacagcttcaggattgtggcatcg gactctggtaagcccagcctgaatcaaagtgccctggtcagagtgcgcctggaagatgag aatgacaaccctcctgtattcaaccagcctgtcatcgagctgtctgtggccgaaaacaac caccgtggcctctacctcaccaccatcagtgccacggatgaggatagtggcaagaacgcc gagattgtctatcagctgggtcccaatgcctcctcctttgacctggaccgcaagaccggg gtcctgaccgcatccagggtcttcgaccgggaggagcaggagcgctacattttcacggtg accgccagagacagtggcaaccctcccctccaaagccaagcagccgtgattgtcaccatc ctggacgagaacgacaacaatcccaaattcacgcacaaccacttccagttctttgtgtcc gaaaatttgccaaagtacagcaccgtaggtgtaatcacggtgacggacgcagatgccggg gagaatgcagaggtgatggcctctgttgttggtgacaatgacaattttatcttgcaccca gtgaacggagttataagatccaacgtctcctttgacagggagctgcaaagctcgtacacg ttcgaagtcaaggcaatagatcgaggtagaccggtccgtacctccattgccaaagtcacc atcaatgtcatagatgtcaatgataacagtcccgttgtaatctatccaccttcaaacacc tcattcaaactggtccccctctctgccatccctggttcagtggtggcagaggtatttgca gtagatgttgacacaggaatgaacgccgaactcaagtacagcatcgtcagtggaaatacc aagggcttgttcagaattgatccagtgactggcaatattaccctggaggagaaacccgct gttgcagaccaaggtttgcatcgattggtggtaaacattagtgatttagggtaccctaaa cccttgcacaccctggtccttgtctacttgtatgtgaatgacaccataagtaatgctagt tacatcaacgaactcataagaagaacgatggagacaccattagataagaacatcggggac agtacccaaccttggcaaaatgaagattatcttaccatcatgatcgccatagtagcgggg gcaatggtggtgattgtggtcatatttgtcaccgtgttggtgcgttgccggcagtcgagg ttcaaagccactcaaagaaacaaacagggtgcagaatggatgtccccaaaccaagagagt aagcaaaacaaaaagaagaaaagaaagaaaagaaagtctccaaagaattctcttctaaac tttgttaccattgaagagtccaaacccgatgaccctgcccacgaacccatcaatgggacc attactcttccagctgagctggaggagcagactataggaaggtttgactggaacacaaca ccaccaacaacctttaagccgagcagcccagaccttgcaaggcattacaagtcaggctca ccacagccctcttttcatctaaagccggacactccagtttctgcaaaaaagcatcatgtg attcaggagctccctttggacaacacctttgttggggggtgcgataccttgtccaagcgc tcttctacgagctcagaccacttcagcgcgtcggagtgtagttcccaaggtggcttcaag acaaaaggcccattgcacaccagacagtctcagaggcgcgttacatttcacctccccgat ggctcccaggaaagctgcagtgatagtggtctaggagaccatgagccggtaaatggtggc ccgctgatctcacaccctctccctctggttcagccgcaggacgagttctacgagcaggct tccccagacaagaggaccgaggccgatgggaattctgacccgaattctatgtacatgtct tcatcaactaatataatgtacagagtctcaacaggcggaaaactgacgaaaatggtgttc aaagtaaccaagcggcagaagcctgcattctccatgtgggctacatgcatgcttatgaaa cagttcacaaaattacaaagattggtccgggccacaaaatccaaaacgcccgctagtgag ggtcaacaacgtggctgcaaccttaccgctgccagagtcaacaaagtttccaaactaggc cgagcagtcaaggactgtcgaaagcgtatcagtgacttacgacttggtgcccggaggaaa ggcgcttttaacaaaaagagaggggcagtccagcacaaagatgtggcaaaagagaaagtc ctaacatgggaggaagagaaggtgaccccgatagtccaccttgtggaacatggacctgat gcgtcctgtaactccagtgactctgatgagtattgcacttcagaacgaagaccagagcag catcagatcactgtggtattggaagagaaggtttctgcccagaaacaaggacatggaatg gtgaatcaaggtacagagactgaagaggttccacaaggttcatgtgaggaatgtagagaa gactctgcagatggacaatggaaagcagcccgttacatgaaagtgccttcctcagagcag tctaggcagcaagggacatatcagccagaggcaatgagacctgccccttccgctgtccca ccaaattcccataacactcccgaaggggatctgtgccccatatgccgcaggttagacgcc ctggtgagcactgtgcagcgtggcttcaaccatatgcacagagacataaatgcattgcag aatgcctcgcagtatcgcggggcccggctgtcccagaatgtcatgtctttggtgggtgca atgcacacactggtgaggctgcatcacttctctgccttgccccggcgggatgtggctatt cagacctccattgtactgacagaacagtgccagggggagaatgttggggcagcatctaat gacctcctaacaacctccaccgagactgtggtgacatcctctgataatgtccagacagct aataacacagctgcacctggagacacagtagttgaaatatcacttgatcctaatggtgac tctgatgagagtatgtccattgaggaatcatcgctaaactcctcagataatgactggtaa

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