Leucoraja erinaceus (little skate): 129697966
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Entry
129697966 CDS
T09122
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129697966 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129697966 (lmo7a)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129697966 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
129697966
NCBI-ProteinID:
XP_055492709
LinkDB
All DBs
Position
6:24560545..24764465
Genome browser
AA seq
1398 aa
AA seq
DB search
MERKGQSDSNVLAFAEGQRWVEEVTGKRFGQKDFRSALEDGVLLCELVNKIKRGVSKKIN
RLSTPIAGLDNVNVFLKGCQKIGLKEAQLFHPGDLQDLSSRVTVKREETERRLKNVLITI
YWLGRRAQSDPQYHGPYLDLNAFEGLLGQTLTKALADSGSLNRSGRDSGYCDIWCAERTE
PTSPQFTHRRDDSFDSLDSLGSKSLTSLSSDVTLKESSEGGGSDIESEDLSSKWVDGPKD
NMSLRRISTSEYKPALPYNQFLPTKSKPATYVPAPLRKKRAERNEDNRRSWASPMFTESD
GSFSRLLQKSTDNDSGSKSLNDVSAEEGDKMRKSLRFEELLKIKQAMNEQDQQWQSDLAG
WKNRRKSANSSLLKKKDEREEIEKMTIGENLKAPKTYRKIREERELRHQDSSSDNQTDYR
KLNSSDEEVFVEDRKPPQRLYERSHTVATETPFTFQKREPVSSAPPVQAPGRRPAPDSKK
TVNNMSEGQGSLPLYMRQAIDHKADQTRVSNSLPRNYQRSSVSRIAPVVSPRPYGTQAKK
LSSLTRPNTQRDEQPKYNGDVNGSKRFQAPSGFPFKSESAAPLESSGLTKRESEGGTRLS
PFLKTEEKRSEEMTLASEPENYQYTKSNFSSNVESDMYQRSNYSSKLENDDQSQGSSLMS
SNEEEGEEEEETRMPSLSEKNFPHESKADTTSNSATMNYFTKATSQPTNTVTTAAMRQKP
YSDTRIVINQKPNGNQDFGFTTDWTATGVTVKTIERGGPAEYCQLEVGNEISSINGNNVA
IMDNQAWLEALEDARKAGKLNMEVRKYKNNSANEMKYSISNEPIRWEATGPTMKTSRSQP
FNQLPDLPQSGENEKKLPEDSTQKASEPISLKNFKRRSQFFEQGRTETAVNDLQTPSISV
SSRWSLNPEEERKRQEMWQKEQDRLLQEKYQLEQEKLQEEWKRAQREAEQEGSKYYEEER
KILQETNSPRSFSVTDGPGESRNKLSSRNWSTSWDDQDTEEELGDEEDDERQSEAETRRQ
EEIRLQDERERERQEKAARRGQERKLQEEREQQRQEQQQRELERQKEERRQRQQAEEQAW
LAEAERARELQPRWAKSKSTSELDEEVPVQKHGVNVGTLGGVAQQLLEEEKPHRSCAKSK
DVMRVELETERLQILNQMKYADPERGDLKSRMSDSAWIKNEAPPKTSHQKEQPLTYAEQD
RQKILLEMRRKTQLLNDNSWIRQRSASVQNKAPVTNYGFMRRGESLDDLDTTGTNTWGST
SEPVNSSEKESTYHPVSTSNRSYMRAPSSTLPPPSTGSVRTASWSKNPSAHPNTQSLITQ
GSRSISGKKICTYCDNALGKGAAMIIESLGLCYHLHCFKCISCSVDLGGTESGAEVRVRN
NNLFCNACYTQYKVGQSN
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagggacagtcggattctaatgtgctggcgtttgcagagggtcaacgctgg
gttgaggaagttactggaaagagatttgggcagaaagattttcgatctgcactggaggat
ggagtcctgctatgcgagctggttaacaagataaaacggggtgtcagtaaaaagatcaac
cgcctgtctacacctatagctggtttggacaacgtaaatgttttcttgaagggctgtcag
aaaattggcttgaaagaagcacagctgtttcacccaggagatctacaggatttatccagt
cgcgtcactgtcaagcgtgaagaaactgaaaggagactcaaaaatgttttgatcacaata
tattggcttggtagaagagcacagtctgaccctcagtatcatggaccataccttgacctc
aatgcgtttgaggggctgttaggacagacgctgaccaaggctcttgcagactcgggaagt
ttgaatcgaagtggaagagacagcgggtactgcgatatctggtgcgcggagcggacagag
ccaacttcgccacagttcacgcacagaagagacgactcattcgatagcttggactcactt
gggtcaaagtctctcacgagcctttcatcagacgtaactctaaaggagagtagcgaaggt
ggtgggagtgatattgagtccgaagatctgagcagcaagtgggtggatggtccaaaggac
aacatgtcacttcgcaggatctccacatctgaatacaagcccgctcttccctacaaccag
ttcctgccaacaaaaagcaagcctgcaacttatgtgcccgctccgctgaggaaaaaacgt
gccgaaagaaatgaggacaatagaagaagttgggccagcccaatgtttactgaaagtgat
ggatcattttcaagacttcttcaaaagtcaactgataatgattcagggagtaaatcgctc
aatgatgtgtctgctgaagaaggggataaaatgagaaaatctcttagatttgaggaattg
ctgaaaataaagcaagctatgaatgaacaggaccagcaatggcagagtgatctggcaggt
tggaagaatcggcgtaaaagtgctaactccagcctactgaagaagaaagacgagagagaa
gaaattgagaaaatgacaatcggagagaatctcaaagcaccaaagacatatcggaaaata
agggaagaaagggagctcagacaccaagattcatccagtgacaaccaaactgactacaga
aagctgaactcctctgatgaagaagtgtttgtagaagacagaaaacccccgcagcgattg
tacgaaagaagtcacacagtggcaactgaaacccctttcaccttccagaaacgtgagcct
gtatcctcagcacccccagttcaagctccaggaagacggccggcaccagattcgaaaaag
accgtcaacaatatgtcagaagggcaaggctcacttcccttgtatatgcgccaggcgatt
gaccataaagctgaccagactcgagtttcaaattctctgcccaggaattatcaaagatcg
agcgtgtcaagaattgctccggtggtttccccgagaccctatgggacacaagctaaaaag
ctctcatcgctcacaaggccaaacacacagcgggatgagcaaccaaaatataatggagat
gtgaatggttcaaaacgtttccaggcaccctcgggcttccccttcaagtctgaatctgca
gcaccattggaaagtagtgggctcacgaaaagagagtcagagggaggcacgaggctcagt
cctttcttgaaaactgaggagaagaggtctgaggagatgacccttgcctccgaaccagag
aattaccagtacacgaagagcaatttttcttccaacgtcgaaagtgacatgtatcaaagg
agcaactattcctcaaaactggagaatgatgaccaatcacagggcagttctttaatgagt
agtaatgaggaggagggggaagaagaggaagaaacaaggatgccatctctcagtgaaaag
aactttcctcatgagtcaaaggctgacaccacttccaactctgcaacaatgaattatttt
acaaaggcaacaagccagcccacaaacacagttaccacagcagccatgcgacagaagccg
tatagtgatacacgcatagttattaatcagaaaccaaacggtaatcaagactttggattc
acaactgattggactgccaccggtgtgactgtcaagacgattgaaagaggaggaccagca
gaatattgccagttggaagtggggaatgaaataagttcaatcaatggcaataatgtagct
atcatggacaatcaggcttggttagaagccttggaagatgcaagaaaagctggaaaattg
aacatggaagtcagaaaatataaaaataacagtgcaaatgaaatgaaatacagcatctcc
aatgaacctattcggtgggaagctactggaccaaccatgaagactagcagaagtcaaccc
ttcaatcaactaccagatcttcctcaatcaggagaaaatgagaagaaattaccggaggat
tcaacacaaaaagcttctgaacccattagtctgaaaaactttaaaagacgatcccagttt
tttgaacaaggtagaacagaaacagcagtgaatgatctacaaactccgtcaattagtgtt
tcaagtcgttggtctttgaatcctgaggaggagagaaagcgccaggaaatgtggcagaag
gaacaggaccgattgttacaggaaaaatatcagcttgagcaagaaaagctacaggaagaa
tggaaacgagcccagagagaagctgaacaggaaggttccaagtactatgaagaggagcgc
aagatactacaagaaacaaacagcccacggtcattcagtgtcacggatgggcctggtgaa
tctagaaacaaattatcctcccgaaattggtccacgtcttgggatgatcaggacaccgaa
gaagagctgggggacgaagaagatgatgaacgccaaagtgaagccgagactaggaggcag
gaggaaatccggctgcaggatgagagggaacgtgagcgccaagaaaaagcagcccgccgt
ggacaggagagaaaactgcaggaggagagggaacagcagcgccaggagcaacaacaacga
gagctggaacgacagaaagaagaaagaaggcagagacagcaggcagaggagcaagcatgg
ctggcagaggcagaaagagcgagggaattgcaacctcgatgggctaaatcaaagtccacc
tctgagcttgatgaggaagtgcctgtgcaaaaacacggtgtaaatgtgggaacattgggc
ggtgtagcccagcagctgctggaagaagaaaaaccacacaggagttgtgccaagtccaaa
gatgttatgcgagttgaattggaaactgagaggctgcaaatcctcaaccagatgaaatat
gctgacccagagcgaggggacctgaagagtagaatgtcagacagtgcatggattaagaat
gaagcaccgccgaaaacctcgcaccagaaagaacagcccctgacgtatgctgagcaagac
cgacagaaaattctgctggagatgcgcaggaagacccagcttttaaatgacaatagctgg
atcaggcagcgtagtgccagtgttcagaataaggctccagttaccaattacggattcatg
agaagaggtgaatctttggatgatttagataccacggggacaaatacatggggatcaacc
tccgagccagtgaattcctcagaaaaggagtcaacctaccacccagtctccacctcaaac
cgatcctacatgcgtgctccatcttcaacactgccacctccatccactggatcagtgaga
acagcttcatggtccaagaacccatctgcacacccaaatactcagtccctaataactcaa
ggcagcaggtcaataagtggaaagaagatctgtacatactgtgataacgctctgggcaaa
ggagctgccatgatcatcgaatctcttggtctttgttatcatttacattgttttaagtgc
atctcgtgcagtgttgacctcgggggcacagaatccggagcagaggttcgagtgcgaaac
aacaatctcttctgcaacgcctgctatacccaatataaagttgggcagtccaattga
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integrated database retrieval system
