Leucoraja erinaceus (little skate): 129698074
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Entry
129698074 CDS
T09122
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129698074 (rnf6)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129698074 (rnf6)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129698074 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
129698074
NCBI-ProteinID:
XP_055492896
LinkDB
All DBs
Position
6:47406200..47442193
Genome browser
AA seq
755 aa
AA seq
DB search
MSSVGEITTGDGWFVESCRLLFKYQQDSKPPKFKTFKLVGIPRTMDSPNSTNHHSDQQAP
TENISRSEDEQRRQLERLSREEAYYQFINDLSEEDYRLMRDSNLLGTPGEITAEELQQRL
NGAKDQLTTQSSLGSNEQSTENQGSDLPGESSNSDSLLEWLNTFRRTGNATRSGQSGNQT
WRAVSRTNPNSGEFRFSLEININHEHEAVSGQSMDTSTLEGTTNRNLENAQQQSASRVSS
RTRSRTRAHIQPAIARTSSASNFGAAVRVEEVESVEVTPPVVQRNMRSRTIEITTGRQRS
RRQSANQQAALSVVGERRTSRRRAEWQNVRTIHEEEQHGRIALEDLERHAIETAINENDF
QGRLEQHRSYRNLQNRRSRSPLRRESTAVNPSDPTASRRDNYVDRRQSTRRQRGTVDQST
MTTEEMQAASGSTTVPPAGGGLLRQEAMDERERIHSSGLSSAVRRHPTIMLDLQVRRIRP
GENRDRDSIANRTRSRVRMAENTVTFESDSGGFRRTISRSELAGIRTYVSTIRIPLRRIS
ETGLGEPSSIALRSILRQIMTGFGELSSLMENDSDSELNQRVQPNLSDSFDSANLQSNPN
LNLSHSRNESADRLTGNQSARVQGHENLQNDNFDRAAESMETRQIRDTNSLVENGTLPIL
RLAHFFLLNDDDEEERQRGLTKEQIDNLMTRNYGSISAENEFSKTCSVCINDYAVGNKLR
RLPCAHEFHIHCIDRWLSENSTCPICRQPILASSN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtaggtgaaatcaccacaggcgatggttggtttgttgaaagctgcaggttg
ctttttaaatatcaacaggattcaaaaccacctaagtttaaaacttttaagttagttgga
attcccaggaccatggactctcctaattccaccaaccaccacagcgatcaacaggcacca
actgaaaacatcagccgcagtgaagacgagcagaggcggcagctggagcgtttgagccga
gaggaggcgtactatcagttcattaacgacctgagcgaagaggactatcggctaatgaga
gacagcaatttacttggcactcctggtgaaattacagcagaggaactgcagcagcggctg
aatggagctaaagatcaattaacgacacaaagcagccttggaagtaatgagcagagtact
gagaatcaaggctctgacttgccaggagaaagctccaatagtgattccctgctggagtgg
ctgaacacatttcgacgcacaggaaatgccacgcgcagtggacaaagtgggaaccagacg
tggagagcggtgagtcggaccaaccccaacagcggtgaattccgcttcagcctcgaaatc
aacatcaatcatgaacacgaagcggtcagtggtcagtccatggatacgtccacactggaa
ggtacaacgaataggaacttggaaaatgctcagcaacaaagtgcgtctcgtgtttcaagt
cgtaccagaagtcgaactcgagcccacatccaaccagccattgcgcggaccagttctgcc
agtaatttcggagctgcggttagagttgaggaagtagaaagcgtggaagttactccacct
gtggtccaaaggaatatgaggagcagaactattgagatcacaaccggtaggcaaaggtcc
aggagacagagtgctaatcaacaagcagctttgagcgtggttggggagcggagaacaagt
aggcgcagagcagaatggcagaacgttagaacaatacatgaagaggagcaacatggtcgc
attgcacttgaggacttggagaggcacgccatagaaaccgcgataaatgagaatgacttt
cagggacgactggaacagcacagatcctataggaatttgcagaacaggcgcagccgatcg
cccttacgtagagaaagcaccgctgtaaatccttcagatccaactgcatctcggcgagat
aactacgtggatcggagacagagtaccaggaggcaacgggggactgtagaccaatccacg
atgaccacggaagaaatgcaggctgccagtgggagtaccacggtcccaccggcaggtgga
ggcttgctgagacaggaggccatggatgaaagggagcgaattcattccagcggattgtct
tcggccgttcgaagacatcccaccattatgttggatcttcaggttagaaggatacgtcct
ggagaaaatcgagatcgtgacagcatcgctaacagaactcgatcccgagtccgaatggca
gaaaacacagtgacttttgaaagtgacagtggcggtttccggagaaccatctcacgatca
gaacttgcaggtattagaacttatgttagcaccattcgtatacctctgcgtaggatatct
gagactgggcttggagagccatcgtcaatagccttgaggtcaatacttcgtcagattatg
acaggatttggtgagctgagctccctcatggagaatgattcagattctgaacttaaccaa
agagttcagccgaacctatccgacagctttgattctgcaaacctgcagtccaacccaaat
ctaaacctctctcattcaaggaatgaatcagccgacagattaactggaaaccagtcggcg
agggttcagggccacgaaaacctgcagaacgataactttgaccgcgctgctgaaagcatg
gagacgagacaaattcgagatacgaacagtttggtagaaaacggtaccctgccaatatta
cggcttgctcatttctttttgctgaatgacgacgatgaggaagagaggcagaggggtcta
accaaagaacaaattgacaatcttatgactcggaattacggaagtattagtgcagagaat
gaattcagtaaaacctgcagcgtgtgtattaacgattatgcagttggaaacaagctcaga
cgcctgccttgtgcacacgagtttcatattcattgcattgatcgctggctttcagaaaac
tccacctgtccaatttgtcgacagccaatcttggcctccagtaattga
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