Leucoraja erinaceus (little skate): 129698077
Help
Entry
129698077 CDS
T09122
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129698077 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129698077 (nup58)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129698077 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
Mitofilin
FapA
PSY3
Motif
Other DBs
NCBI-GeneID:
129698077
NCBI-ProteinID:
XP_055492909
LinkDB
All DBs
Position
6:complement(47772608..47831410)
Genome browser
AA seq
589 aa
AA seq
DB search
MTTGFGFGTAAAAPGGGFALGATSNPSGTGGFAFGNLGTTAPTATTTASTFGGLSGGLFA
QKQPTGFSFGPTSTGATTAATTGLSLVAPTTTTGFGLGFTKPASSVTPFTMPVAPTAAGG
LCLSSVLPTSTAGSTGFALNLGGIPASAASIPTGLTLGGALTGLGGTLFQGTNASTLALG
QSLGLNLGVSPAAATITASEGLGGIDFSGSSDKKNDKCSTGVRPDESKALKDENLPPVIC
QDVENFQKFVKEQKQVQEEISRMSFKAMLKVQEDIKALKQLLAVVASGLQRDSLAIDKLK
IESAQELKNAEIALRTQKIPPGLQHENTAPADYFRQLVEQFEVQLQQYRQQIEELENHLA
TQANSSHMTPQDLSLAMQKVYQTFVALAAQLQSIHESAKILREQYLGYRKTYYGDATDVF
EARRVETKKWQNTPRVTTGPTPFSIPNAAAVAMAATLTQQQQPATGSQPALGVNFGVPFA
SGIGTGLQSTGLGSTTLGGFGNTSAFGSNTSGNASFGFGSATKPSGSLSAGFGSSTTTGF
NFNNPGITASAGLTFGVSNPSTSGLSSNLVGGQLLQLKKPPAGNKRGKR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccggcttcggcttcggcaccgctgcggccgcccccggcggcggcttcgccctc
ggagccaccagcaaccctagtggtactggagggtttgcctttggcaatcttggaaccact
gccccaaccgctaccacgactgcatcaactttcggaggccttagtggtggattgtttgca
cagaaacaacccactggattctcatttggacccacctcgacaggggctacaacagcagca
acgacaggactatctttggtagcacccacaactacaactggttttggtttgggattcact
aaaccagcgagctctgtaacccctttcacaatgcccgtggcacctactgcagcaggggga
ctgtgcctgtcatctgtactcccaacatctacagcaggatctactggatttgcattgaat
ttaggtggaatccctgcatccgcggcatccatacccacaggtctgactttgggaggggct
ctgacaggcttaggtggcaccctctttcagggtacaaatgcctcgactttggcacttgga
caatcgctgggtttaaatcttggtgtatctccagctgctgcaaccattacagctagtgaa
ggacttggtggaatagacttcagtggatcttctgataagaaaaatgataaatgttcaact
ggagttagacctgatgaaagcaaagcgctgaaggatgaaaatctgccccctgttatctgt
caggatgtggaaaactttcagaaatttgtaaaagaacaaaaacaggtacaagaagagatc
agtcgaatgtcttttaaagccatgctgaaagtacaagaagacatcaaggcactgaaacaa
ctgctggcagtggttgcaagtggactacagagggattcacttgccattgacaaacttaag
atagaatccgcacaggagcttaagaatgctgaaatagcattaagaacacaaaagatacca
ccaggtcttcaacatgaaaacaccgcaccagcagactatttcaggcagctggtggaacaa
tttgaggttcagttacagcagtatcgacagcagatagaggaactggaaaatcaccttgct
acgcaggctaacagctctcacatgactccacaagatctgtctcttgcaatgcagaaagta
taccagacatttgtagctctggctgctcaacttcaatcaatacatgaaagtgcaaagatt
ctaagagagcagtatcttggctaccgtaagacatactatggtgatgccactgatgtcttt
gaagcgaggcgcgttgaaactaagaagtggcaaaatactccacgtgtcacaactgggcca
actcccttcagcataccaaatgcagcagcagttgccatggctgcaacattaacacagcag
caacagcctgctacaggatcacagccagctttgggagttaactttggagtaccgttcgcc
tcaggtattggcactggcttgcagtcaactggcttaggttctacaacacttggaggattt
ggaaatacttctgcctttggaagtaatacttcaggcaacgcctcatttggatttggatca
gccactaaaccctcaggaagcctcagtgcaggttttggcagctcaactacaactggattt
aacttcaataaccctgggatcacagcgtctgctggtctgacctttggtgtgtccaatcct
tcaacatcaggtcttagcagcaatcttgtagggggacagctcctacaactgaagaaacca
ccagccggcaacaagcggggcaaaagatag
DBGET
integrated database retrieval system