KEGG   Leucoraja erinaceus (little skate): 129698077
Entry
129698077         CDS       T09122                                 
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129698077 (nup58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129698077 (nup58)
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129698077 (nup58)
SSDB
Motif
Pfam: Nucleoporin_FG2 Nup49_C Mitofilin FapA PSY3
Other DBs
NCBI-GeneID: 129698077
NCBI-ProteinID: XP_055492909
LinkDB
Position
6:complement(47772608..47831410)
AA seq 589 aa
MTTGFGFGTAAAAPGGGFALGATSNPSGTGGFAFGNLGTTAPTATTTASTFGGLSGGLFA
QKQPTGFSFGPTSTGATTAATTGLSLVAPTTTTGFGLGFTKPASSVTPFTMPVAPTAAGG
LCLSSVLPTSTAGSTGFALNLGGIPASAASIPTGLTLGGALTGLGGTLFQGTNASTLALG
QSLGLNLGVSPAAATITASEGLGGIDFSGSSDKKNDKCSTGVRPDESKALKDENLPPVIC
QDVENFQKFVKEQKQVQEEISRMSFKAMLKVQEDIKALKQLLAVVASGLQRDSLAIDKLK
IESAQELKNAEIALRTQKIPPGLQHENTAPADYFRQLVEQFEVQLQQYRQQIEELENHLA
TQANSSHMTPQDLSLAMQKVYQTFVALAAQLQSIHESAKILREQYLGYRKTYYGDATDVF
EARRVETKKWQNTPRVTTGPTPFSIPNAAAVAMAATLTQQQQPATGSQPALGVNFGVPFA
SGIGTGLQSTGLGSTTLGGFGNTSAFGSNTSGNASFGFGSATKPSGSLSAGFGSSTTTGF
NFNNPGITASAGLTFGVSNPSTSGLSSNLVGGQLLQLKKPPAGNKRGKR
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgacgaccggcttcggcttcggcaccgctgcggccgcccccggcggcggcttcgccctc
ggagccaccagcaaccctagtggtactggagggtttgcctttggcaatcttggaaccact
gccccaaccgctaccacgactgcatcaactttcggaggccttagtggtggattgtttgca
cagaaacaacccactggattctcatttggacccacctcgacaggggctacaacagcagca
acgacaggactatctttggtagcacccacaactacaactggttttggtttgggattcact
aaaccagcgagctctgtaacccctttcacaatgcccgtggcacctactgcagcaggggga
ctgtgcctgtcatctgtactcccaacatctacagcaggatctactggatttgcattgaat
ttaggtggaatccctgcatccgcggcatccatacccacaggtctgactttgggaggggct
ctgacaggcttaggtggcaccctctttcagggtacaaatgcctcgactttggcacttgga
caatcgctgggtttaaatcttggtgtatctccagctgctgcaaccattacagctagtgaa
ggacttggtggaatagacttcagtggatcttctgataagaaaaatgataaatgttcaact
ggagttagacctgatgaaagcaaagcgctgaaggatgaaaatctgccccctgttatctgt
caggatgtggaaaactttcagaaatttgtaaaagaacaaaaacaggtacaagaagagatc
agtcgaatgtcttttaaagccatgctgaaagtacaagaagacatcaaggcactgaaacaa
ctgctggcagtggttgcaagtggactacagagggattcacttgccattgacaaacttaag
atagaatccgcacaggagcttaagaatgctgaaatagcattaagaacacaaaagatacca
ccaggtcttcaacatgaaaacaccgcaccagcagactatttcaggcagctggtggaacaa
tttgaggttcagttacagcagtatcgacagcagatagaggaactggaaaatcaccttgct
acgcaggctaacagctctcacatgactccacaagatctgtctcttgcaatgcagaaagta
taccagacatttgtagctctggctgctcaacttcaatcaatacatgaaagtgcaaagatt
ctaagagagcagtatcttggctaccgtaagacatactatggtgatgccactgatgtcttt
gaagcgaggcgcgttgaaactaagaagtggcaaaatactccacgtgtcacaactgggcca
actcccttcagcataccaaatgcagcagcagttgccatggctgcaacattaacacagcag
caacagcctgctacaggatcacagccagctttgggagttaactttggagtaccgttcgcc
tcaggtattggcactggcttgcagtcaactggcttaggttctacaacacttggaggattt
ggaaatacttctgcctttggaagtaatacttcaggcaacgcctcatttggatttggatca
gccactaaaccctcaggaagcctcagtgcaggttttggcagctcaactacaactggattt
aacttcaataaccctgggatcacagcgtctgctggtctgacctttggtgtgtccaatcct
tcaacatcaggtcttagcagcaatcttgtagggggacagctcctacaactgaagaaacca
ccagccggcaacaagcggggcaaaagatag

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