Leucoraja erinaceus (little skate): 129698081
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Entry
129698081 CDS
T09122
Name
(RefSeq) uncharacterized protein LOC129698081 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129698081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129698081
Membrane trafficking [BR:
leri04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129698081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Myosin_TH1
PH_5
Motif
Other DBs
NCBI-GeneID:
129698081
NCBI-ProteinID:
XP_055492919
LinkDB
All DBs
Position
6:47915162..48023630
Genome browser
AA seq
1336 aa
AA seq
DB search
MRSTKTNSAFIVRAVSAPDLTLESSESLMSYQIDEMKESETEVGSINENGHVKLISGPTS
SNIYHNGNVKSCNGSTNGSIDILLSTGNSDSRMFQSSSPQKMDNYYDQRNINGQESRDST
SPSKNMQVFSSPRKKVIWSSDNRPSSVIMMGNTPTWNALSTLRKMSSLKKFKSTVFHGIQ
VRDNSAVRNVENVENEHKHMQNGHGVQMQNKYSCTETLQDICSSADDRASDGSETEDVDE
VFLRHTHRSRSIRRAYRIGRINLIDYDKSPIQENSTSIAPLGAQESNVSDSMVTNCKNHK
VIYRRSKSTDNLSFFKKSSFKRKSACNFTELKVTNANVDLGKTASTSENDEDSTGNTKIQ
SKHWRSPVRTKGFDRMLRLVSNVTEGVKRRESPSKENSPLYEQGIRSNSRLHDDYSRRVS
SGADSERHTYKSNWKNDSSSLEPCSPSTTISVPIVIMDMEKSLSSPEFQINRPSQCFSKA
VTNPSDLITCSPISPTTDDVFFNNSSESTRLIIRNEQPKTPDTAVTSKPQSPFHCSNQYS
NLSLSSTDSDGRTEGNIPKTGRCPVSFQDMVQTVYFDGNEDSGISSYSQLSLNTMISEMD
EKKEEVSSEDLWRKPLSSLEEDILNTQRVGQRRWNCGKGRQRQRPVSDYGQFASRKFFIP
KNDLPVQPPNMDFTDSEDTTDASCVDSQPQQYTIIQHHENQKRRPISVIGGFNVYENNSE
QMEDLLTVQSVVRPPIPSHEIPPYKAVSARIRPLTFSQSTPIGLDRVGRRRQMRTSNISA
DRGTEISALVDDNGSEEDLSYGEISRANPRYLQPGGEQLAVNELISDGHVVCAEALWDHV
TMDDQELGFKAGEVIEVLDASNKEWWWGMIDDKEAWFPASFVRLRVNQEDARGEYTGKSP
DEQLDTHCGKHRLHKSAENKEQMRTNVIKEIMNTERVYIKHLKDICEGYIRQCRKHTGMF
AEAQLSTIFGNIEEIYKFQRKFLKDLEKQFNKNEPHLSEIGSCFLRHHAEFGIYSEYCNN
HSSACLELVKLMKQSKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYT
TPDHSDYESISAAYEAMKNVAHLINERKRRLENIEKIAQWQVSIVNWEGQDALTRSSELI
HSGELTKISNQGKSQQRTLFLFDHQLILCKKDMLRRDMLYYNGHIDMDEIKAVDVEDGKD
KDFNIHIKNGFKLKSPTEEVHLFCAKKPEDKQRWLQACIDERKRVDEDKEMGFEIAESQK
KQAMLNAKKSSHGKMKGLNYSGFSVPPLHQSLHPLHQRHITVPTSIPQQQVFALAEPKRK
PSPFWHSFSKLTSFKK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcaccaaaaccaattcggcatttattgttcgggcagtcagtgctccagatttg
actcttgaatccagtgagtcactaatgtcataccagatagatgaaatgaaggaaagtgaa
actgaagtggggtcaattaatgaaaacggccatgtcaagctgatcagtggcccaacttct
tccaacatttatcacaatggcaacgtaaaatcgtgtaatggatctacaaatgggagcatt
gatatcttgttatccacaggtaattcagactctaggatgttccaaagttcatctcctcag
aagatggataattattatgatcagagaaacatcaatggacaggagagtagggatagcaca
agtccttcaaaaaatatgcaagtattttcaagtccaaggaagaaggtcatttggagctct
gacaatagacccagttctgtgataatgatgggaaatactcccacgtggaatgccttatca
accctgaggaaaatgagttccttaaaaaaatttaaatctacagtttttcatggaattcaa
gtgagagataactctgcagtcagaaatgtggaaaatgttgaaaatgagcacaaacatatg
caaaatggccatggcgtacaaatgcagaataaatattcttgcacagagactttacaggac
atatgtagctctgcagatgaccgtgcctcagatggctcagaaactgaagacgtcgatgaa
gtctttttgcgccacacccaccgatcacggagcattagacgtgcttacaggattggacgg
ataaatttaattgactatgataaatctccaattcaagagaactctaccagcattgcgccg
cttggggcccaagaatcgaacgttagtgattcaatggtaaccaattgtaaaaaccacaaa
gttatctacagaagaagcaaaagcactgataatttaagctttttcaagaaaagttccttt
aaaaggaaatcggcctgcaactttacagagttaaaagtaaccaatgcaaatgtagattta
ggaaaaacagcaagcacttcggaaaacgatgaggactccacaggcaatactaaaatacaa
tcaaaacattggagaagcccagtcaggactaaaggttttgacagaatgctaagattagtg
agtaatgttacagaaggtgtaaaaaggcgagaaagcccttcaaaggaaaattcaccatta
tatgaacaaggaatccgatctaatagcaggctgcatgatgattattctcgaagagtttct
agtggtgctgacagtgaaagacacacatataaatccaactggaagaacgattcttcttct
ctggaaccctgtagcccatccaccaccataagtgttccaattgttatcatggacatggag
aaatcattgtcttcaccagaatttcaaatcaatagaccttcccaatgcttcagcaaagct
gtaacaaatccaagtgatctaattacctgttctcccattagtcccacgactgatgacgtt
ttttttaacaattcaagtgaatcgactcggctcataattagaaatgaacagcccaaaaca
cctgacacagcagtgacttctaaacctcagagtccattccattgttcaaatcaatatagt
aatttgtctcttagctcaacggacagcgatggacgaactgaaggaaacattccaaaaact
ggaagatgtcctgtatcttttcaggatatggtgcaaacagtatactttgacggcaatgag
gacagtggcattagcagctattcgcagctcagtctgaacacaatgatttcggaaatggat
gaaaagaaagaagaggtttcctctgaagacctgtggagaaagccattatcttcattggaa
gaagacattctgaacacacaaagagttggtcaaaggaggtggaactgtggaaaaggcagg
cagcgacaacggcccgtttcagactatggccagtttgcgagcaggaagttttttatccca
aagaatgatcttcctgttcaacccccaaacatggattttacagatagtgaggacactact
gatgcatcttgtgttgattcccagccacagcaatatacaattattcagcatcatgagaac
caaaagagaaggcccatctctgtaattggtggattcaatgtctatgaaaataactctgag
caaatggaggaccttcttacagtacaatcagttgttcgaccacccatcccttcacacgag
ataccaccatacaaagcagtgtctgccagaattcgaccgttaaccttctcccaaagcaca
ccaattggtttagatcgggttggacggagaagacaaatgaggacatcaaatatatctgca
gatagaggcacagagatttctgctctggttgatgacaatggcagtgaggaggatttgtca
tatggggaaataagtcgagcaaatcccagataccttcaacctggtggggaacaacttgct
gtaaatgagttgataagtgatggccacgttgtatgtgcagaggcgctctgggatcatgtc
accatggatgatcaggagcttggattcaaggctggagaagtcatcgaagtacttgatgcc
tccaacaaggaatggtggtggggcatgattgatgataaagaagcctggtttccggccagc
tttgttcgactacgggtgaaccaggaggatgccagaggtgaatacactggaaaatctccg
gatgaacagttggatactcactgcggtaaacatcgccttcacaaaagcgctgaaaacaaa
gagcagatgcgaacaaatgtaatcaaggagatcatgaatactgaacgagtctacattaag
catctgaaagacatctgtgagggatatattcgtcaatgtcgcaaacatacagggatgttt
gctgaagcacagttgagtaccatttttgggaacattgaagagatttacaaattccaaagg
aaatttctgaaggacttggagaaacaattcaataaaaatgaacctcacctgagtgaaata
ggatcctgtttccttcgacaccatgccgagtttgggatatactctgaatattgcaacaat
cattccagtgcatgtctcgagctagttaaactaatgaagcaaagtaaatatcggcacttt
tttgaggcttgtcgactgcttcaacagatgattgacattgcaattgatggcttccttcta
actccagtgcagaagatttgtaaatacccactccagcttgctgaattgctcaaatacacc
accccagatcacagtgattatgagagcatcagtgctgcctatgaggccatgaagaacgtg
gcacatctgattaacgaaaggaaaaggcgattagaaaatatagaaaagattgctcagtgg
caagtctccattgtaaattgggagggacaagatgctttaactagaagttcagaattgatc
cattctggagagttgactaaaatctcaaaccaaggaaagagccaacagaggactttattt
ctttttgaccatcaattgattctctgtaaaaaagatatgctgagacgagatatgttgtat
tacaatggccacatcgacatggatgaaataaaagcagtggatgtagaggatggcaaagac
aaagattttaacattcacataaaaaatggctttaaattgaaaagtccaacagaggaagtc
cacctattttgtgccaaaaagccagaagacaaacaacgatggctgcaggcatgtatagac
gaaaggaaaagagtagacgaggataaagaaatgggatttgaaatagcagagagtcagaag
aaacaagctatgttaaatgccaaaaaatccagtcatgggaaaatgaagggactgaattat
agcggattttctgttcctcctctccaccagtcccttcacccactccatcagcgacacatc
accgtgcctaccagtattccccaacaacaagtttttgcactggctgagcccaaacgcaaa
ccatctccattctggcacagctttagcaaattaacctcctttaagaaatga
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