Leucoraja erinaceus (little skate): 129698126
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Entry
129698126 CDS
T09122
Symbol
atm
Name
(RefSeq) LOW QUALITY PROTEIN: serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03440
Homologous recombination
leri04068
FoxO signaling pathway
leri04110
Cell cycle
leri04115
p53 signaling pathway
leri04210
Apoptosis
leri04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129698126 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
129698126 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129698126 (atm)
04210 Apoptosis
129698126 (atm)
04115 p53 signaling pathway
129698126 (atm)
04218 Cellular senescence
129698126 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
leri01001
]
129698126 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leri03032
]
129698126 (atm)
03036 Chromosome and associated proteins [BR:
leri03036
]
129698126 (atm)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129698126 (atm)
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129698126 (atm)
Protein kinases [BR:
leri01001
]
Serine/threonine kinases: Other
PIKK family [OT]
129698126 (atm)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129698126 (atm)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
129698126 (atm)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
Check point factors
Other check point factors
129698126 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
DUF3349
Motif
Other DBs
NCBI-GeneID:
129698126
NCBI-ProteinID:
XP_055492994
LinkDB
All DBs
Position
6:complement(51734093..51857285)
Genome browser
AA seq
3060 aa
AA seq
DB search
MSLAIQELLLCCRQIDNDKATERKKEVDKFKRLIRRPETREQLDRNSESKHSKQLNWDAV
FRFLQKYILKETECLKAANQNVSAATQANRQKKMQEISNIMKYFIRWANKRGPRLKCQEL
LKHIMDVLQNKFSSAYGADYNSILLKDVLSVRKYWCDITQQQWSDLMTLYFKMYLRPSRD
TNRVLVARIIHTLVKGCCVLSEGITSKLFEFFAKAMQNVRQEQVFAVIEHIVSALNVFLK
MCIMNCRVRVCKLGEDIFSTLLCIWTQKRLQDSLKDEIIEFFRLQLQAHHPKGIKTKEKG
AFAADWLNWQNLLYSLHEAIVSEVSHIGSRGKYSAGVRHVAVKENLVNLAADICHQLFGR
DFRVSVSPVTSTQTPQSPSVQGMPSKQRRVELGWEMICDALQKSENDFDLIPWLQIVTVL
VAKYPSSLPNCDLVPILTILHQILSQQRRGKRIPYVLCCLHEVAICQRLKLTLNTAQKLD
LQKLWAKIWAIALRSISSHQTEAESFQLMEAILEGNLTIPDIDFWKIFSGSTCKPSSSAV
KCLSQALGRCTLPERIDGAVENYPMGGRALDLREAIMQWLLSYQAEENAEGNTEIPSVVS
RDLPNQLVSQILVVLTLKDCKSGMDFFQPPSTESAPAEEPPNEDCKDGTVFSEMESLFLQ
TTFDEIPTRSSTKIRIGDKQIVTSKISAKRVLRDKLEEYLLALVECLHSNVTLPPECHVR
CADLIIGVLRCYCDIGVTNEDNACASALFQKAKSFMQNVGEHISTTRNDLNEEVLNSLKT
LINVCTKCLHSHTKQHWPKKQSSVLFLQLFAASFMNDLVEVCRRLAFPTGKPCDAFEAKD
DFQDDLMETEGHGSGDLFDDDNDKGPEGGDYNENNDSSVGIGAKNILSEDNLTKHDFLLL
DILRFICCCTAAGQIHALSFRCADIRRKLLSLIEDINHNISKPPHLHMYLILLKELPSEE
GILPSSDFVVLLKPLLDLCSVYRCDQDVCSVILTHILPLLSVHGLDADEMADIQGILLKA
IGAFWHLSKEGKCNVQVRTALVRCMKALLEKDPHSKWTVLSSRDEELPVSEAYTEFLTDS
HHQVRMLTAMSISSLFQETRVQDTSVKLHALPVKLQQKAFENVYMKVQSGMRYQNRTSPE
ELQDEECNRRATLLIVLSLIMCCSPICEKQALFAICQSLKENKLDPMLVKKILESTSKCL
TYHTLESFMVSHMDYLIHEWLAVTDPDYKLSTFPYIVLNCSNLEEFYRSYYKVLIPHLMV
TGNIKEVKSIAAHINREWKELLVDCLPKIMVNILPYFAYQENSGSDNVFAQRRENASKVY
DMLKEDDCLGKQQIDHLSLNNLPEIVVEVLNTLYDLPNQDVANGGELGNFVGAMDPAPNP
PHFPSYIIKATLEYIGNCHKEKFKSLVAALSKNPDSIQKILLAICKKAADSTSAYEKHRI
LTMYRLFVNLLLKEIMDGLGRLWAFVLRDVIYSLIHHINSRPAHMDDVSTRSFSLCCDLL
NATCKTAVEHCGDALENHLHVIVGTLTPLVQEQPEIRQQALTLLKYLVISNRDNKNLYHA
IRRLDPFPDLPEFKELRLIQEKIKYSKKRFTLLEEINHFLSVNSCDSLPLTRLVGLNDLK
KQLALHKEDTKILLKECQDDPESSVLVKLVVNLLQLCKSAICHPAGKDILEAAGKCFGEM
GPIDFSTIALQNKKDKFHFKASEVLKENDSKLVCILLGVINNALIDQCIDVRFAAAKCAK
NILATQTGHQFWEFSKNEPNGPDPMLMYLHPFRTPRMKIPELLADSRSSPSETLDDSSLW
IPQGVNHDTWLKTLTCKLLDSGGVRSEVLQLIKSLCEVKADFCQMILPYLIHDILLHDDN
SCWQGLLSNHIQSFFNVCCRMGSSSSRSTTPAIIDSETDSLPHGSMDKTSRRTMLAVVDY
LRKQKRHQLSTVWDDNFWLDLNYLEVALTAQSCAAHFTALLYAEIYADKIRSDEEELKRS
SRRAARILKFDEGSQEQTISSLSSKSREETGISLQELLIEVYRSIGEPDSLYGCGGGKML
HPLARVRTYEHEVLWDKALVTYDIEMNLPVSTRQAGIVQALQNFGLCHILTTYLKGLEVE
NTEWCEELQEIRFQAAWRNMQWDPIPPSKGGNSGPGYHESVYHALQSLKDQEFSAFHEVL
KVARIKEVEELCKGSLESVYSLYPTLCRLQILEELEIIGHMLCRSDPDDALNTVHRKWQQ
QLLLLKDSDFTFQEPVLTMRTVIQELLIKKEMDGQRKELIKDALTEHLLEMAKLARAAKN
SQLAEKAIFQIKQHNPVGFGVSTWQLEEAQVFWDKQEQSLSLDILKQMIDKLEGTDDKAL
VPLYVECLRLCGNWLAETCLESPGTIMQMYLEKAVTHSIQHKDIVHNGKIEAFLSLARFS
DAQYQSIDNYMKSSEFENKRALLKNAKAEIHLMKEHKVQINRYVVKVQRECELDERAMCA
LQEDRKQFLCRAVENYINCLQSGGEHDMRIFRLCSLWLENSGVAEVNGMMKKGVEKIPSY
KFLPLMYQLAARMGTKMTGGHRFHEVLNKLIERTSLDHPHHTLFIILALSNANKDDILGK
PEEQRRGKHTKKEMPHLDQERMDAASNIINTVRKSKAKMIKDIERLCDSLITLANMDTSK
WKTERKAIEIPAIQPITKIKNLEVVIPTMEVKVDPSGKYENLITVQSFKSQFRLAGGVNL
PKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLEKNLETRKRKLTIRTYKVI
PLSQRSGILEWCAGTTPIGEYLVDPNEGAHKRYRPSDWSSLECRKKMSEAQKLSFEGKYQ
VFMDVCKNFRPVFRYFCMEKFLDPAVWFEKRLGYTRSVATSSIVCYIVGLGDRHVQNILI
DEESAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMEVM
RSSQEALLTILEVLLYDPLFDWTMNPLKALHLQQRPEDTDLHSTLNNSVAGDDNECDGKI
TDDKSINKVAERVFLRLQEKLKGVEEGAVLSVGGQVNLLIQQARDPKNLSRLFPGWQPWV
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgcaattcaggaactgcttctctgctgccgtcaaattgacaatgacaaagct
acggagagaaagaaagaagtggataaatttaaacgccttattcgaaggccagaaaccagg
gagcagttggatcgaaattcggaatcaaaacattcaaaacaattgaattgggatgcagtt
tttaggtttctgcaaaagtatatccttaaagaaaccgaatgtctcaaggcggccaatcaa
aacgtgtccgcagcaacgcaagctaatcgacaaaagaaaatgcaagaaataagcaatata
atgaaatattttatccgatgggctaataaaagaggaccacgtttaaaatgtcaagagcta
ttgaagcatatcatggatgttctgcaaaataaattcagctctgcttacggggctgactac
aatagtattctgctgaaggatgttctttcagttcggaaatactggtgtgatataacccag
caacaatggtcagatttaatgacattgtacttcaagatgtacctcaggccctcgagagat
actaaccgggttcttgtagccagaataattcatacgcttgtgaaaggctgttgtgtattg
tcagagggcattacctccaaactctttgaattctttgcaaaagcaatgcagaatgtaaga
caggaacaagtctttgcagtcattgagcatatcgtatcagctctcaatgtcttcctcaag
atgtgtataatgaattgccgtgttcgtgtgtgtaaacttggggaggacatcttctcaacg
ctgctatgcatttggacacagaagcgtctccaagattccttaaaggacgaaatcattgaa
ttctttcgtctacagctccaagcccatcatccaaaggggataaaaactaaggaaaaaggt
gcttttgcagctgactggttgaattggcagaacctgctttatagtctccacgaagcaatt
gtcagtgaagtgagccacataggaagcagaggaaagtattccgcaggcgtgcgccatgtt
gctgtgaaagagaaccttgtcaatctggctgctgacatctgtcatcagttgtttggccgt
gacttcagagtgtctgtgtcaccagtaacaagtacgcaaactccacaaagcccctccgtt
caagggatgccaagcaaacaaagacgtgttgagttgggatgggaaatgatatgcgatgcg
ttgcaaaaatcagagaacgattttgatttgataccatggttacaaatcgtcactgttctg
gttgcaaaatatccttcaagcttacccaactgcgatcttgttcccatattgaccattttg
caccagatcctttctcagcagcggcgtggaaagagaattccatatgttctttgctgcctt
catgaggtggctatatgccagagattgaaattgaccctgaatactgcacagaaattagac
ttgcaaaagctctgggccaaaatctgggccattgcacttcggagcatcagctcgcaccag
actgaagctgaaagcttccagctgatggaggcaattcttgaagggaacctaaccatacca
gacattgatttttggaaaatcttttcaggatccacatgcaaaccatccagttccgctgtg
aagtgtctttctcaagcattgggaagatgtacattgccagaacgaattgatggtgctgtt
gaaaattatccaatgggcggcagagcactggatcttagagaagcaataatgcaatggtta
ttgtcttaccaagcggaggagaatgctgaaggaaatacagagattccatcagtagtttcc
agagatttaccaaatcaactggtgtctcaaatattggttgttttaacgctgaaggactgc
aaatctggaatggacttctttcagccaccctcaacagagagtgcaccagcagaagaacca
ccaaatgaagattgcaaagatggcacagtcttctcagaaatggaaagcctttttctgcaa
acaacatttgatgaaattccaactcgcagtagcactaagattcggattggggacaaacag
attgtgacatcaaaaataagtgccaagcgagttttgagggataaactagaggaatattta
ttagcattggtggaatgtctgcattctaatgtgacgcttcctccagaatgccatgttcgc
tgtgcagatcttatcattggagtgctccgatgttattgtgacattggtgttaccaacgag
gataatgcatgtgcgtctgcgctatttcagaaggcaaagtcttttatgcagaatgttggt
gaacacatttctacaacgcgaaatgatcttaatgaagaggttctcaactctctgaaaaca
ctgattaatgtgtgcacaaaatgtctacactcgcacactaagcagcactggccaaagaag
caatcatctgttctctttcttcaactattcgcagcaagttttatgaatgacctcgttgaa
gtttgtcgacggctggcatttcccactggaaaaccatgtgatgcttttgaggcaaaggac
gattttcaagatgatttaatggaaacagagggacatggatccggagacctctttgatgac
gataacgacaaaggccctgaaggaggagattataatgaaaacaatgactcatcggttgga
ataggagcaaagaacattttatctgaagacaatttgacaaagcatgatttcctcctgctc
gatattctccgattcatctgttgctgcacagcagcaggtcagatacatgcactttcattc
aggtgtgcagacattagaagaaagctactgtcattaattgaggacatcaaccacaacatt
tcaaaacctccccacttgcatatgtacttaatcctcttaaaagagctcccatcagaagaa
ggcattctaccttcaagtgattttgtcgtacttctgaaaccactcttggacttgtgttct
gtgtatcgttgtgatcaagacgtttgttcagtgatcctgacacacattcttccattactg
tcggtacatggccttgatgctgatgaaatggctgacattcaaggaattttgctaaaagca
attggagcattctggcatctaagcaaggaaggaaaatgtaacgtgcaagtgagaactgct
ctggtgagatgcatgaaagccctacttgagaaagatcctcactccaagtggactgtgctt
tccagccgagatgaagaattgcctgtctctgaagcctacacagagttcctaacagacagt
catcaccaagttcgcatgcttactgctatgtctataagcagtctattccaggagactcgg
gtacaggatacgtctgtaaagctgcacgcccttcccgtgaaactgcagcaaaaagccttt
gaaaatgtgtatatgaaagtacaatcaggaatgagatatcagaatcgtacatccccagaa
gaacttcaggatgaggaatgcaacagaagagctacgttgcttatagtgctttcattgatc
atgtgctgcagccccatatgtgaaaagcaggccctatttgctatttgccaatcattaaag
gagaacaagctagaccctatgcttgttaaaaagattcttgagtctacgtcaaagtgtttg
acttaccatactttggagagcttcatggtttctcatatggattatctgatccatgaatgg
ctggcagtgactgatcctgactacaaattgtctacattcccttacattgtattgaactgc
tctaatctggaagaattttacaggtcctattacaaagtacttatcccccacctgatggtt
actgggaacataaaggaagtgaaatcaattgctgcgcacattaacagagagtggaaagaa
ttgcttgttgattgccttccaaagataatggttaatattctgccttactttgcatatcaa
gaaaatagtggatctgataatgtttttgcacaacggagagaaaatgcatccaaggtgtat
gacatgctgaaagaagatgattgcctggggaagcagcaaattgaccatttgagcctcaac
aacttgccagagattgttgttgaggtgctcaataccctgtatgatcttcctaaccaagat
gtagcgaatggtggagagctggggaactttgttggggcaatggatcctgctcctaaccca
ccacattttccttcctacattatcaaagctactctggaatatattggaaactgccataaa
gagaagttcaaatcacttgtggcagcactttcaaaaaaccctgattcaatacaaaagatc
ttgctggcaatttgtaagaaggcagcagacagtaccagtgcttatgaaaagcatagaatt
ctgacgatgtatcgattgtttgtaaatttgctactgaaagagattatggacggactggga
agattgtgggcatttgttctccgtgacgtcatctatagtctgattcaccacatcaacagt
cggccagcacacatggatgatgtatccacacgcagtttttctctgtgctgtgatctcttg
aatgccacttgtaaaactgctgtagaacattgtggggatgcactggaaaatcatcttcac
gtcattgtgggtacattaacaccattggtccaggaacagccagagatccgtcaacaggcc
ctcacgttgttgaagtatctagtgatttctaatcgagacaataaaaacctataccatgca
attaggcggttggatccattccccgatcttcctgaattcaaagagctgcgtcttatccag
gagaaaatcaagtatagtaagaaaaggttcacattattggaggaaatcaatcacttcctc
tcagtcaattcctgtgattccttgcccttgactaggcttgtgggattaaatgatctaaaa
aaacaactagcacttcataaagaggacactaaaatcctgctaaaagaatgccaagatgat
cctgagtccagtgtccttgtgaaactagtcgtgaatcttctgcaattgtgcaagtctgct
atctgtcaccctgctggaaaagatatattggaagctgcaggcaagtgctttggagaaatg
ggtccaattgacttttccaccattgctttacaaaacaagaaagataaatttcatttcaag
gcgtcagaagttttgaaagaaaatgattctaaattggtttgcattctcctcggtgtaatt
aataatgctctcattgaccaatgtattgatgttcgctttgcagctgctaaatgtgcaaag
aacatacttgccacccaaacaggccaccaattctgggagttcagtaagaatgaacccaat
ggtcctgatcccatgttgatgtatttacaccctttccgaacacccagaatgaagattcct
gagctgctagcagacagcagatccagtccttctgaaactcttgatgacagcagtttgtgg
atacctcagggtgtaaaccatgacacatggttgaaaacactaacctgtaaactattagac
agtggaggtgtgaggagtgaagttctacagttaataaagtcactatgtgaggtgaaggct
gacttctgccagatgattcttccatacttgatccatgatattctccttcatgacgataac
agttgctggcaggggttgttatctaaccacattcaaagtttctttaatgtgtgctgtaga
atgggatcaagctctagcagatccaccacaccagccattattgattcagaaacggacagc
cttccccacggatctatggataagacctctcggcgcacaatgctggctgtggtcgattat
ctgcgcaagcaaaaaagacatcagctgagcactgtatgggatgacaacttctggctggat
ctgaattatttggaggttgctttgacagcccagtcatgtgcagctcactttacagccttg
ctttatgcagaaatctatgctgataaaatcagatctgacgaggaagagttgaaacggagt
tctcgcagagcagctcgcatcttaaagtttgatgaaggcagccaagaacaaacaatctcc
agcttgagcagtaaaagcagagaagaaacggggattagcttacaggagctactgattgaa
gtctacagaagtataggagaacctgatagtttatatggctgtggtggagggaagatgttg
cacccacttgccagagttcgaacatatgagcatgaagtgctgtgggataaggctcttgta
acatatgacattgaaatgaatcttcctgtctctacacgccaagctggtattgtccaggct
ttacagaactttggactatgccatattctaactacatatctaaaggggcttgaagttgaa
aacacagaatggtgtgaggaactgcaggaaatccgcttccaggcagcctggagaaacatg
cagtgggatcctatccctccaagcaaaggtgggaattcgggacctgggtatcatgaatct
gtgtaccatgctttgcagtctctgaaagaccaagaattctctgccttccatgaggttttg
aaggttgccagaattaaagaagttgaagaattgtgcaaaggaagcctggagtctgtctac
tctctataccccacactatgcagattgcaaatactggaagaactagaaatcatcgggcac
atgctctgcagatctgacccagatgatgctttgaatacagtacacagaaaatggcagcaa
cagcttctgcttctcaaggacagtgactttacattccaggagcctgtcttaaccatgagg
actgtcattcaagagctgcttatcaaaaaagaaatggatggtcaaaggaaggaactcatt
aaagatgctctgactgagcatttacttgaaatggcaaaattagcaagagcagcaaaaaat
tcccagttggcagaaaaggcaattttccaaatcaaacagcacaatccagttgggtttggt
gtttctacctggcagctggaagaagcccaagtcttttgggataaacaggaacagagtctt
tctcttgatattctcaaacagatgattgacaagctagagggaactgatgacaaagcatta
gtaccactctatgttgagtgtctgagactgtgtggaaattggttggcagaaacatgttta
gaaagccctggcactatcatgcagatgtatttagaaaaagctgtgactcatagcattcaa
cataaggacatagttcacaatgggaaaattgaagcatttttatcgttggcacggttctct
gatgcacagtatcagagtattgataattatatgaagtcgtctgagtttgaaaacaaacgt
gcacttctcaaaaatgccaaagcagaaattcatttaatgaaggaacataaagttcagatc
aacagatatgtagtgaaagttcagcgggaatgtgaattggatgaacgagcgatgtgtgca
ttgcaagaagatcgtaagcagtttctgtgtagagccgtggagaactacatcaactgcttg
cagagtggtggagaacatgacatgcgcatcttcagactctgctccttgtggcttgaaaac
tcgggagttgcagaagtaaacggaatgatgaagaaaggtgtagaaaagattccatcttac
aagtttttacctttgatgtaccagctggctgctcgaatgggaacaaagatgacaggaggt
catagattccatgaagtgttaaacaagctaattgaaagaacttcattggatcatccacat
cacacactgtttatcattttagccttatccaatgcaaacaaggatgacattctagggaaa
cctgaagaacagaggaggggtaaacatactaaaaaggagatgccacacttagatcaggag
agaatggatgctgccagtaacataataaataccgttcgaaaatctaaagctaaaatgata
aaggacattgagagattatgtgattccttaatcacgcttgcaaatatggacactagtaaa
tggaaaacagaaagaaaagccattgaaattcctgcaatacagcctatcacaaaaataaag
aatcttgaagttgttattccaacaatggaagttaaggttgatccatctggaaagtatgaa
aacctgatcactgtacaatcattcaagtctcagtttcgattagcaggaggagtgaatctt
ccaaaaatcattgattgtgtggggtccgatggcaaagagagaaggcagctagtcaagggt
cgggatgatctgcgacaagatgccgtaatgcagcaggtttttcagatgtgcaacactctt
ttggaaaagaatttggaaaccagaaagagaaagctgactatccgtacatacaaggttatt
cctctttctcaaagaagtggcattcttgaatggtgtgcaggaaccacgcccattggggaa
tatctggttgacccaaatgaaggagcccataagaggtatcgaccaagcgactggagcagc
ctagaatgcaggaagaaaatgtctgaagcacagaaactgagctttgaaggtaaatatcaa
gtcttcatggatgtctgtaagaatttccggcctgtcttccgatatttctgtatggagaag
tttttggatccagccgtttggtttgaaaagcgtcttggatacactcgaagtgtggctacg
tcttcaattgtttgctacattgtcggtcttggtgacagacacgtacagaacatcctcata
gatgaagagtcagctgaacttgtgcacatagatctgggggttgcatttgagcaaggaaag
attcttcccactccagagacagttccgttccgcctaactcgggacatcgttgatggaatg
ggcatcactggtgtggagggggttttcaggaggtgttgtgaaaagacgatggaagttatg
cgaagttctcaggaggccttgttaacaatccttgaggtgctgctatatgaccctcttttt
gattggaccatgaatcctttaaaagcacttcacctacaacagaggcctgaagatacagac
cttcattccacgttgaacaactctgtggctggggacgacaacgaatgtgatggaaagatt
actgatgacaagagcatcaacaaagtggcagaacgtgtctttctgagacttcaggagaaa
ttgaagggcgttgaagaaggtgcagtcctcagtgttggtgggcaggtgaacctactcata
caacaagccagagacccaaagaatctcagtcggctctttcccggctggcagccttgggta
taa
DBGET
integrated database retrieval system
