KEGG   Leucoraja erinaceus (little skate): 129698144
Entry
129698144         CDS       T09122                                 
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
  KO
K05450  platelet derived growth factor C/D
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04010  MAPK signaling pathway
leri04020  Calcium signaling pathway
leri04510  Focal adhesion
leri04540  Gap junction
leri04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129698144 (pdgfd)
   04020 Calcium signaling pathway
    129698144 (pdgfd)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129698144 (pdgfd)
   04540 Gap junction
    129698144 (pdgfd)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    129698144 (pdgfd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:leri04052]
    129698144 (pdgfd)
Cytokines and neuropeptides [BR:leri04052]
 Cytokines
  Growth factors (RTK binding)
   129698144 (pdgfd)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 129698144
NCBI-ProteinID: XP_055493029
LinkDB
Position
6:53613009..53717545
AA seq 367 aa
MLLLFTLVIVFADFGLHGIKAQGGSIKALRSSTIQRDESNHLTAIYRHEDTVNVVKNGYV
QSPRFPLNYPRSILLTWKLLSPENTRIQLVFDTRFGLEDPENDICRYDFVEVEDISDTSR
VIRGRWCGSKEVPPRLTSKSNRIRITFKSDEYFVAKPGFRIYYSPVEVEDLQPQTSKSNW
EAVTSSILGSQGHHSSATASPLTAESLDEAIASFDTIEELLRHLNPDFWEDDLNNIFKET
PQFRGRTFHHRERKTKVDLNRMNNDVKRYSCTPRNYSVNLREELKQTNAVFFPRCLLVQR
CGGNCACGTEHWGSCNCMQARTVMKYHSVLRFIPEPGKSRKRNMSLVDIQLEHHERCDCI
CSSRPPR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgttattgctattcacattggttatagtgtttgctgactttggccttcatggcatcaaa
gctcaaggtggttctattaaggcgttgcgatcatctactatacagagagatgagagcaat
cacctcacagcaatttatcggcatgaggatacagtcaatgtcgtgaagaatggatatgta
cagagcccacggtttcctctcaactatccaagaagcatcttattgacatggaagttgctg
tctcccgaaaacacaagaatacaattggtgttcgatactcgtttcggactggaggaccca
gaaaatgatatttgcaggtatgactttgtagaggtggaagatatatctgatacaagccga
gtcattcgtggaagatggtgtggcagtaaggaagttcctccgagactaacatcgaaaagc
aacagaataaggataacctttaaatcagatgaatattttgttgccaaacctggatttcgc
atttattactctccagtggaagtggaagatctacagccacaaacctcaaaatcaaactgg
gaggcagtcacaagttctatcctgggttcacaggggcatcattcctctgctacagcttca
ccactgactgcagagtctttggatgaggctattgctagtttcgatacaatagaagaactt
ctgaggcatttaaatccggacttctgggaagacgacctgaataacattttcaaagaaaca
ccccagtttcgaggcagaacattccatcaccgtgaacgaaagaccaaagtggacttgaac
agaatgaataatgacgtaaaacgctacagctgtaccccgcgaaactactccgttaacctt
cgagaagagctgaagcaaacaaatgcagttttcttcccgcgctgccttctcgttcaacgc
tgtggtggaaactgtgcctgtggtaccgaacactggggatcctgcaactgcatgcaagct
agaactgttatgaaatatcattcggtgttgagatttattcctgagcctggaaagagcaga
aagaggaacatgtcccttgttgacatccagttggagcatcatgaacgatgtgactgcatc
tgcagttcccggccaccccgatag

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