Leucoraja erinaceus (little skate): 129698162
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Entry
129698162 CDS
T09122
Name
(RefSeq) high-affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129698162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129698162
Transporters [BR:
leri02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129698162
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
129698162
NCBI-ProteinID:
XP_055493072
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Position
6:complement(55286501..55304097)
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AA seq
583 aa
AA seq
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MTVHVDGIVAIVIFYMLILIVGLWAAWKSKNSPTLGAMDRSEAIMIGERDIGLLVGGFTM
TATWVGGGYINGTAEAVYVPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEMFWSAAVLSALGATLSVIVDINIKLSVIISAVIAIFYTLI
GGLYSVAYTDVVQLFCIFLGLWISIPFAMLHPAVTDIAITANHEVYQAPWLGTIDPKDIL
IWMDNFLLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCIVMAIPSVLIGAIGAST
DWNQTSYGLPDPKSENKTDMILPIVLQHLCPSYISFFGLGAVSAAVMSSADSSILSASSM
FARNIYHLAFRQEATDNEIVWVMRITIFLFGGAATAMALLADSIYGLWFLSSDLVYVIIF
PQLISVLFVKGTNTYGSIAGYIIGFLLRISGGEPYLHMEPFICYPGCYLEHSFGADPVYV
QRFPFKTMAMLFSFLGNLGVSYLAKHLFESGILPQKFDFLDSVVAQHSKENMEKTLLVNH
DNITLSELVHVNPKHSASVNAFTNKEAFEDTEPIPEFSKSEND
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacacgtcgatgggatcgtagcgatcgttatcttttacatgttgatcttaatt
gttggattatgggctgcttggaaaagtaaaaactcgcccacgttaggggccatggatcgg
agtgaagccatcatgatcggagaaagagatatcggattgctggtcggtggcttcactatg
accgcgacctgggttggcggtggatatatcaatggcacggcggaagcggtgtatgtccct
ggttacggattggcgtgggcacaggctccattcggatacgcgctcagtttggttgtagga
ggcttattcttcgccaaacccatgcgctcacggggttacgtgaccatgttggaccccttt
caacagatctacggcaagcgaatgggaggactgctcttcatacccgctctcatgggagaa
atgttttggtctgcagccgtgttgtccgctctaggtgcaaccttgagcgtgattgtggac
atcaacattaaattatcagtgattatttccgccgtgatcgctatattctacactctgatc
ggcggattgtactcggtcgcgtatacagacgtcgtccagttattctgcatcttcttgggt
ttgtggatcagcattcctttcgccatgctacaccctgcagtcacagatattgccataact
gcaaatcatgaagtttaccaggccccttggttgggaacgatagatccgaaggacatttta
atctggatggacaacttcctgctgctgatgctgggtggaatcccgtggcaggtatatttt
cagcgagtcctttccgcttcctctgctacctatgcacaagtgctgtcctttctggctgcc
ttcggctgtattgtcatggccatcccgtctgttctaattggcgcaattggagcatccacc
gattggaatcagacatcctatggtttgcctgaccctaaaagcgagaacaagacagatatg
attttgccaatagtgctgcagcatctgtgtccttcctacatatcctttttcggtcttggt
gctgtctctgctgcagtgatgtcatcggctgattcttctattttatcagcaagttctatg
tttgctcggaatatttatcatcttgctttcagacaagaggctacagacaacgaaatcgtg
tgggtaatgcggatcaccatattcctatttggaggggctgcaacagcaatggcattgctg
gctgactcaatctatggcctctggtttctcagctcagatcttgtctacgttattatattt
cctcagttaatatcagtgctctttgtcaagggaacaaacacgtatgggtccattgctgga
tatatcattggctttttgcttcgaattagtggtggtgaaccatatttacacatggagcca
tttatttgttaccctggatgctatttagagcattcctttggagcagaccctgtctatgtt
caaagatttccctttaaaacaatggcaatgttattctccttcttgggcaatcttggtgtt
tcatatctcgccaagcacctattcgaaagtggaatattgcctcaaaaattcgacttcctt
gacagcgttgtggcacaacacagtaaagaaaacatggaaaaaaccttattggtgaatcat
gacaatattactttgtcagagctggtacatgttaacccaaaacacagtgcttcagttaat
gctttcaccaataaggaagcatttgaagacactgagccaatccccgaattttctaaatca
gaaaatgattga
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