Leucoraja erinaceus (little skate): 129698366
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Entry
129698366 CDS
T09122
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129698366 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129698366 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129698366 (vps36)
Membrane trafficking [BR:
leri04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
129698366 (vps36)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129698366 (vps36)
Exosomal proteins of colorectal cancer cells
129698366 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
Motif
Other DBs
NCBI-GeneID:
129698366
NCBI-ProteinID:
XP_055493454
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All DBs
Position
6:83814246..83851089
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AA seq
385 aa
AA seq
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MDRWAWANGLLDMTETLVIQQRGVRLYDGDDKTKFDSGSLLLTTHRLLWRDQKTSDCCIS
LPLWQIVFFEEQAAGIGKSAKIIIHLQAAASNKDAGPYQSSKYSFIKLSFREHGQIEFYR
RLAEELSQKRWERSSVPQPVPAGRSQPGRVKAVGIVGIERKLAEKRKETDKNISEAFEDL
SKLMTKAKEMVDLSKSIANKIKEKQGAISEDETIRFKSYLLSMGIADPVTRETHGSGTNY
HKELAKQLVAMLHAPLEEQGGMMALTEVYCLTNRARGMELLSPEDLVNACKMFEDLKLPM
RLRVFDSGVMVVQLQSHNEDEMIASALETVSERGVLSSEEYAKLVGISVLLAKERLLLAE
KFGHLCRDDSVESLRFYPNLFLTQD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctgggcgtgggccaacggcctgctggacatgaccgagaccctggtgatccag
cagcgcggagtccgcctctacgacggcgacgataagacaaaatttgactctggctccctt
ctgctcaccacacacagattactctggagagaccaaaaaacttctgattgctgcatctcg
ctgcctctgtggcagattgttttctttgaagaacaagcagctggaataggaaaaagtgct
aaaataatcattcatcttcaagcggctgcctccaacaaggatgcgggcccgtatcagagc
agcaagtactctttcatcaaactctccttccgcgaacatggacagatcgagttttacagg
cgacttgcggaggaactatctcagaagcgatgggagaggagctctgtacctcagccagtg
ccagctggtagatcacaaccaggaagagtgaaggctgtaggaattgtgggcatagagcgg
aagctggcagagaaacggaaggagacggacaaaaacatctcggaggcgtttgaagatctc
agtaagttaatgacaaaggccaaagagatggtggacttgtcgaagtcaatagcgaacaaa
atcaaggagaagcagggagctatttctgaggatgagacgatccgtttcaaatcgtaccta
ctcagcatgggcatagcagatccagtcaccagggaaacgcatggatcgggaacaaactac
cacaaggaactggccaagcaactggtggcgatgctgcacgcccccttggaggaacaaggt
ggaatgatggctctgaccgaggtctattgtttaacgaaccgggctcgaggaatggagctt
ctctcaccagaagatttagtgaatgcttgtaaaatgttcgaggatctgaaactaccaatg
agattgcgtgtttttgacagtggagtgatggtggttcaactccagtcacataatgaagat
gaaatgattgcttcagctctggagacggtgtcagagcgaggcgtcctcagttcagaagag
tacgccaagctggtgggcatctcggttctgctggccaaggagaggctgctgctcgccgag
aagtttggccacctctgccgtgacgattccgtggaaagcctgcgcttctacccaaacctc
ttcctgacgcaagactga
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